Ggra9708.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra9708.t1
Unique NameGgra9708.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length711
Homology
BLAST of Ggra9708.t1 vs. uniprot
Match: A0A2V3J239 (PAB-dependent poly(A)-specific ribonuclease subunit PAN2 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J239_9FLOR)

HSP 1 Score: 1019 bits (2634), Expect = 0.000e+0
Identity = 524/712 (73.60%), Postives = 588/712 (82.58%), Query Frame = 0
Query:    1 MNSQFVPPR-SPPADEAQAPPVYSEAEQYYYDGAAEH-RPPHGWYEHSCTQVGHPNSHTDPIRALACDPVKELIWAATASGMLHAHQAPAMARIVFTYVGEPSSDPSNHGDVSDIVVSSACVLAAGSCGLAVVKRGGVLAASIRADTIRNAKALALNPVSDDYVCFEGESRMLAVVDVQQQRILRQATLRGATGVTAAVWTAPQAASSLAVFSTSTGRISLCDPSSMREVNAIAAFAGATTSIASSGYYLAATGLGTRGGVPYLEQTVKLYYIRAVQNPLPYVFFSAPPMFIAFDHATSQIYNTDGALWMLSPHGVMQLLDISTVTSREPAYPLCDEIHLDAGSDVFTAMVVSSQGLLVLGDSGRFVHQWSSSESVKMNSSSEPVWTTPVNPEPPTPSIHMDDFINLDIGGTIPKCAMPEFECEYLTEELFTSVSNQPQRRKRGELYATRTSKGVVTTNDLYAREPFARFPLQISDEFLDVAQQHRYVAYSQAPPSFVRNSESGHRRPPIVRTTKRKYRLQGERGSSLPTGKPSNSANRIDLSKPAERSKYVERDLVAWESIEGFDFLKYNTSPRFCDLENALPNVYVKPAVQALYFCPPVRTAIGNHSCHRDWFISCELSFLFHMFDLGGAGMACEAGNFTRAFMTMVNAGALGLLDGAHALRLLQRIENFTRYLLEQLHKDEGMEVESTVLSVFEAETRSHGTFMGSKTD 710
            MN QFVP      AD+A  P VY++ E +YY   A+    P GWYE SCTQ G    H DPIRALACDP KELIWA TASGMLHAH A  M+RIV +Y+GEPS+  +N GDV DIVVS++ VLAA S GL +V RGGVL  ++RA+ I NAKALALNP+SD +VC  GESRMLAV+D++Q+RILRQATLRGATGVTAA+W AP+AASS+A+FSTSTGRISLCDPS+MREVNAIAAFAGATTS+A+SGYYLAATGL TRGGVPYLEQ+VKLY IRAVQ PLP V FSAPPMFIAFD ATS +YNTDGALWMLSPHGVMQLLDIS VT+  PAYPLCDEI LDAGSDVFTAMVVS QGLL LGDSG FVHQW+SS+SVK+N+SSEPVWTTPVNPEP TPSIHMD+FI  +IG TIPKCA+PEFE EYLT+ELF S    P +RK G+L + R +K V T  DLY R PFARFPLQI+D+ L VA++H +V+Y+QAPPSF+RNSESGHR+PP  +    K RLQ ER SS P+G  + ++   DL+K + RS YVE DLVAWES EGFDFLKYN S RFC LENALPNVYV PAVQALYFCPPVRTAIGNH+C RDW ISCEL FLFHMFDLGGAGMACEAGNFTRAFMTM NAGALGLLDG HAL L QRIENFTRYLLEQLHKDEGME +STVLSVF AET S+GTFM SKT+
Sbjct:    1 MNHQFVPSSVGGSADDAHLPSVYTQHEPFYYGQHADVLNQPAGWYEVSCTQAGAATPHADPIRALACDPRKELIWAGTASGMLHAHYAADMSRIVSSYIGEPSASHTNLGDVRDIVVSNSSVLAAVSYGLVIVNRGGVLCGAVRAEAISNAKALALNPLSDKHVCIGGESRMLAVIDLEQERILRQATLRGATGVTAALWAAPEAASSIAIFSTSTGRISLCDPSTMREVNAIAAFAGATTSMATSGYYLAATGLSTRGGVPYLEQSVKLYDIRAVQAPLPSVLFSAPPMFIAFDSATSSMYNTDGALWMLSPHGVMQLLDISPVTTGAPAYPLCDEIQLDAGSDVFTAMVVSPQGLLFLGDSGGFVHQWTSSDSVKVNASSEPVWTTPVNPEPSTPSIHMDNFITSEIGATIPKCALPEFEYEYLTDELFDSTEKPPFKRKPGKLRSARIAKAVNTDCDLYPRFPFARFPLQITDDILQVAKRHSFVSYAQAPPSFIRNSESGHRKPPKTKAVNTKSRLQRERRSSSPSGGSAVTSAGPDLTKSSVRSMYVEMDLVAWESFEGFDFLKYNASARFCGLENALPNVYVNPAVQALYFCPPVRTAIGNHACDRDWCISCELGFLFHMFDLGGAGMACEAGNFTRAFMTMANAGALGLLDGPHALPLSQRIENFTRYLLEQLHKDEGMETDSTVLSVFGAETVSYGTFMTSKTN 712          
BLAST of Ggra9708.t1 vs. uniprot
Match: R7QR64 (USP domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QR64_CHOCR)

HSP 1 Score: 793 bits (2048), Expect = 5.590e-272
Identity = 416/717 (58.02%), Postives = 515/717 (71.83%), Query Frame = 0
Query:    1 MNSQFVPPRSPPADEAQAPPVYSEAEQYYY-DGAAEHRPPHGWYEHSCTQVGHP-NSHTDPIRALACDPVKELIWAATASGMLHAHQAPAMARIVFTYVGEPSSDPSNHGDVSDIVVSSACVLAAGSCGLAVVKRGGVLAASIRADTIRNAKALALNPVSDDYVCFEGESRMLAVVDVQQQRILRQATLRGATGVTAAVWTAPQAASSLAVFSTSTGRISLCDPSSMREVNAIAAFAGATTSIASSGYYLAATGLGTRGGVPYLEQTVKLYYIRAVQNPLPYVFFSAPPMFIAFDHATSQIYNTDGALWMLSPHGVMQLLDISTVTSREPAYPLCDEIHLDAGSDVFTAMVVSSQGLLVLGDSGRFVHQWSSSESVKMNSSSEPVWTTPVNPEPPTPSIHMDDFINLDIGGTIPKCAMPEFECEYLTEELFTSVSNQPQRRKRGELYATRTSKGVVTTNDLYAREPFARFPLQISDEFLDVAQQHRYVAYSQAPPSFVRNSESGHRRPPIVRTTKRKYRLQGERGSSLPTGKPSNS-----ANRIDLSKPAERSKYVERDLVAWESIEGFDFLKYNTSPRFCDLENALPNVYVKPAVQALYFCPPVRTAIGNHSCHRDWFISCELSFLFHMFDLGGAGMACEAGNFTRAFMTMVNAGALGLLDGAHALRLLQRIENFTRYLLEQLHKDEGMEVESTVLSVFEAETRSHGTFMGSKTD 710
            MN+ F     P   E   P  Y+  + Y Y   A  H+   GWYE SC + G       D IRALA DPVKELIWA TA GMLH+H A  M R+V +YV EPS+DPS   DV DIVVSS  VLAA   GLAV+ RGG   A++RADTI+NA+ LALNP S+ +VC  GESRMLA++D+QQ+RILRQATLRGATGVT A+W A  A SSLA+F+TSTGRIS CDP++MRE+NA+AAFAGATTSIA SGY+LAATG+GTRGGV Y EQ VK++ IR +  P+P V + APPM++ FD  +S ++NT+GA+W+LSP G++Q +DIS++ +  PAYP+ + I LDAGSDVFT M VS  GLL +GD+G F+H+W+S+++VK+N SSEP+W +P+  EPP+PS+ +D  +  DIG TIPKCA+PE+   YLT+ELF +     Q+R       +           LY R P+ARFPL++ D+    A++H  V Y+QAP SFVRNSE GH+  P+V+    K+R + + G  + +G PS+S       ++DLSKP  RS YVE DLVAWES EGFDFLKYN S  FC LENALPNVYV  AVQ LYF PP+R AIG+H+C R W ISCEL FLFHMFDLGGAGMACEAGNFTRAFMTM NAGALGLLDG HAL L QRIENF+RYLLEQLH+D+     S V ++F  ET SHGTF  SKT+
Sbjct:    1 MNNNFHGHSYPHGGEMN-PNTYNHNQDYQYVPNADPHQEVSGWYEVSCVEAGAGVPGRNDAIRALAFDPVKELIWAGTAGGMLHSHFASDMTRVVSSYVAEPSADPSITDDVRDIVVSSHSVLAAMGYGLAVLTRGGAFLAAMRADTIKNARGLALNPHSESHVCIGGESRMLAIIDLQQERILRQATLRGATGVTKALWGASDATSSLAIFATSTGRISFCDPATMREINAVAAFAGATTSIALSGYFLAATGIGTRGGVSYFEQHVKIFDIRRLDTPMPSVAYQAPPMYVTFDAYSSHLHNTNGAMWILSPEGLLQCMDISSIANGTPAYPITEPIQLDAGSDVFTCMAVSPSGLLTIGDTGGFIHEWTSTDTVKVNDSSEPLWLSPITTEPPSPSLRLDAILTSDIGTTIPKCALPEYGHSYLTDELFGT-----QKRSDSPTQPSHHRIKPGLPESLYERHPYARFPLRVRDDISASAKRHTSVGYAQAPHSFVRNSEEGHKASPVVKGMYGKHRNK-KYGKPMSSGTPSSSKGVEVVRKLDLSKPYFRSYYVEMDLVAWESFEGFDFLKYNKSALFCGLENALPNVYVNAAVQVLYFTPPLRRAIGSHTCERQWCISCELGFLFHMFDLGGAGMACEAGNFTRAFMTMANAGALGLLDGPHALPLSQRIENFSRYLLEQLHQDDHSHEGSMVSNLFGTETVSHGTFTPSKTN 710          
BLAST of Ggra9708.t1 vs. uniprot
Match: A0A5J4YMM7 (PAB-dependent poly(A)-specific ribonuclease subunit PAN2 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YMM7_PORPP)

HSP 1 Score: 192 bits (489), Expect = 1.200e-47
Identity = 202/697 (28.98%), Postives = 296/697 (42.47%), Query Frame = 0
Query:   42 WYEHSCTQVGHPNSHTDPIRALACDPVKELIWAATASGMLHAHQAPAMARIV-FTYVGEPSSDPSNHGDVSDI------VVSSACVLAAGSCGLAVVKRGGVLAA-------------------SIRADTIRNAKALALNPVSDDYV--CFEGESRMLAVVDVQQQRILRQATLRGATGVTAA--------VWTAPQAASSLAVFSTSTGRISLCDPSSMREVNAIAAFAGATTSIASSGYYLAATGLGTRGGVPYLEQTVKLYYIRAVQNPLPYVFFSAPPMFI------------AFDHATSQIYNTDGALWMLSPHGVMQLLDIS--TVTSREPAYPLCDEIHLDAGSDVFTAMVVSSQGLLVLGDSGRFVHQWSSSESVKMNSSSEPVWTTPVNPEPPTPSIHMDDFINLDIGGTIPKCAMPEFECEYLTEELFTSVSNQPQRR---KRGELYATRTSKGVVTTNDLYAREPFARFPLQISDEFLDVAQQHRYVAYSQAPPSFVRNSESGHRRPPIVRTTKRKYRLQGERGSSLPTGKPSNSANRIDLSKPAERSKYVERDLVAWESIEGFDFLKYNTSPRFCDLENALPNVYVKPAVQALYFCPPVRTAIGNHSCHRDWFISCELSFLFHMFDLGGAGMACEAGNFTRAFMTMVNAGALGLLDGAHALRL---LQRIENFTRYLLEQLHKDE 682
            W E  C          D +  L  D   E+++ A++SG++ A    ++ R         P+S P  HG    I      +    C++A  +  L+V+  GGV  A                   S+ +  +RN + +  +P +   V  C    S  + VVD++++R+L  + L   +   A+        V  AP AAS  AV   S G +SL D S++R++ ++     A TSI      LA       GG PYL   + L+ IR + +    +  +A    +             FD +  Q+   D ALW LS  G +    +   +++S  P  P  D + LDA  D+F  + VS  GL+  GD   F H WS          +  V  TP     P P       IN+       + +  +     L  E+   V    +R    + G           +T      + PFA FP  +  E +  A  H    Y+ AP  F+ N         ++               S P    S S+   +LS P  R      D  A ESIEGF+F   N S     L+NALPN YV   +QALY   P+RT + +H C R+  ISCEL FLF M   G   +ACE+ NFTRAFM + NA ALG+L+ + +L L   L+R+EN + +LLEQL KDE
Sbjct:   14 WVEIGCVNCVADGQLVDSVVHLCFDSRLEMLYTASSSGIVTAMDMVSLQRYASIALPAVPTSSP--HGTAFAIRALLPRINEPGCLVATAN-RLSVLSPGGVPHAEIVSRSRKPRVPSAVAPVSSMDSTCLRNIRCMDQSPFNTSQVLLCGGHPSAKVGVVDLERERVLIDSALSVFSSANASSPSYEATCVRWAPSAASFSAVGCVS-GLVSLRDASTLRQIGSLRPLPSAVTSIDCFETLLAVASYSISGG-PYLYSELYLHDIRMLGSTTGSLASAADASLLHVVPAVNGIVQLRFDDSL-QLARDDVALWSLSSKGELSAFSLHDLSLSSTTPPAPT-DALRLDADEDLFMCLAVSRAGLVCAGDQSGFAHVWSQ------EGLTASVHETPEQLPEPRPVSAGHARINI-------RPSFQQLPPHALDIEIGIPVPVNGEREPHEENGNQDEKMDLLPELTKLLPSGKRPFAHFPRHLKPELIKSAYFHGGHYYTHAPRWFIPNCVQSQ----VIDEPDVSSAAASRAVESGPFDPESQSSP--NLSSPWGRVARKYADSAALESIEGFNFAPLNQSASMSGLQNALPNSYVNALLQALYLQQPLRTLLEDHRCARELCISCELRFLFQMLSSGAQEVACESSNFTRAFMKLPNAMALGVLEDSKSLGLVPELRRVENLSIFLLEQLKKDE 684          
BLAST of Ggra9708.t1 vs. uniprot
Match: PAN2-PAN3 deadenylation complex catalytic subunit Pan2-like isoform X1 n=4 Tax=Haliotis TaxID=6452 RepID=UPI001EE630C1 (PAN2-PAN3 deadenylation complex catalytic subunit Pan2-like isoform X1 n=4 Tax=Haliotis TaxID=6452 RepID=UPI001EE630C1)

HSP 1 Score: 141 bits (356), Expect = 5.230e-31
Identity = 132/483 (27.33%), Postives = 215/483 (44.51%), Query Frame = 0
Query:  215 GRISLCDPSSMREVNAIAAFAGATTSIASSGYYLAATGLGTRGGVPYLEQTVKLYYIRAVQNPLPYVFFSAPPMFIAFDHATSQIYNTDGALWMLSPHGVMQLLDISTVTSREPAYPLCDEIHLDAGSDVFTAMVVSSQ-GLLVLGDSGRFVHQWSSSESVKMNSSSEPVWTTPVNPEPPTPSIHMDDFINLDIGGTIPKCAMPEFECEYLTEELFTSVSNQPQRRKRGELYATRTSKGVVTTNDLYAREPFARFPLQISDEFLDVAQQHRYVAYSQAPPSFVRNSESGHRRPPIVRTTKRKYRLQGERGS--SLPTGKPSNSANRIDLSKPAERSKYVERDLVAWE-SIEGFDFLKYNTSPRFCDLENALPNVYVKPAVQALYFCPPVRTAIGNHSCHRDWFISCELSFLFHMFDLGGAGMACEAGNFTRAFMTMVNAGALGLL-----DGAHALRLLQRIENFTRYLLEQLHKDEGMEVES 688
            GR++L DP SM+  + + A +G  +      + L   G   R G    ++ +K+Y +R ++   P +  S  P F+ F      I N    L ++S  G  QL+D +   S    +       ++ G  V T+  +SS   +L  GDS  ++H +++ +    N+ S+P  T   +P  P  SIH++D   L     +P    P  +   L  +  T++S +  R+                             P  I  E L   + +  V Y  AP S         RR  I     ++  +Q   G+  S  +  P +   R +    A   KY   ++   +  +E FDF  YN +  F  LE  +PN Y    +Q LYF  P+R  + +H CHR++ +SCEL FLFHM D    G  C+A NF RAF T+  A ALGL      + A  + L + I+++ R++L+Q+H +  +++ES
Sbjct:  210 GRVTLYDPQSMKAEHVLEAHSGTLSDFDLHDHLLVTCGFSNRMGNLQADRFLKVYDMRVMRAVAP-IQVSFDPTFLRF------IPNYSNKLAVVSQVGHFQLVDPNNTMSNASMF-----YQVNTGGAVLTSFDISSTCNVLSFGDSSGYIHLYTNRDHPTFNAYSQP--TEFPDPVEPVQSIHIND--ELAPVSMVPMVYPPSGQ---LLSDWQTNLSARKYRK-----------------------------PKPIDPEILRTMKVYHNVGY--APNS------GKERRNQIPYKLPKEVHMQTTGGTTHSRKSSVPESPLGRGEDPFVAVPKKYRRVEMKYSKLGLEDFDFRHYNKT-HFAGLETHIPNAYCNAMLQVLYFLEPLRCHLLSHLCHREFCLSCELGFLFHMLDTQ-KGQTCQASNFLRAFRTIPEASALGLCLSEAEEAAGKVNLPRLIQSWQRFVLQQVHSETAIKLES 634          
BLAST of Ggra9708.t1 vs. uniprot
Match: A9S9L2 (PAN2-PAN3 deadenylation complex catalytic subunit PAN2 n=6 Tax=Physcomitrium patens TaxID=3218 RepID=A9S9L2_PHYPA)

HSP 1 Score: 140 bits (353), Expect = 1.310e-30
Identity = 138/497 (27.77%), Postives = 208/497 (41.85%), Query Frame = 0
Query:  215 GRISLCDPSSMREVNAIAAFAGATTSIASSGYYLAATGLGTRGGVPYLEQTVKLYYIRAVQNPLPYVFFSAPPMFIAFDHATSQIYNTDGALWMLSPHGVMQLLDISTVTSREPAYPLCDEIHLDAGSDVFTAMVVSSQG-LLVLGDSGRFVHQWSSSESVKMNSSSEPVWTT-PVNPEPPTPSIHMDDFINLDIGGTIPKCAMPEFECEYLTEELFTSVSNQPQRRKRGELYATRTSKGVVTTNDLYAREPFARFPLQISDEFLDVAQQHRYVAYSQAPPSFVRNSESGH-----------RRPPIVRTTKRKYRLQGERGSSLPTGKPSNSANRIDLSKPAERSKYVERDLVAWESIEGFDFLKYNTSPRFCDLENALPNVYVKPAVQALYFCPPVRTAIGNHSCHRDWFISCELSFLFHMFDLGGAGMACEAGNFTRAFMTMVNAGALGLLDGAHALR------LLQRIENFTRYLLEQLHKDEGMEVESTVLS 692
            G I L D  +M+  + I A  G  +S+   G  L + GL  R G  Y E  +K++ IR    PL ++ FS     + F    S I     A       G + L D+  V +   +Y       +D  SD   +  VSS G LL  GDSG +VH W +SE   +N  S P   +          S+ MD  +N      +P    P  E      E F+ V            +   T+    +  D+         P  +    L+    H +V Y   P  + R S  G            R+ P +    +   +Q   G S+ T K +  + +  L K   R +  +         E FDF  YN + RF  LEN + N Y    +Q LYF P ++ A+ +H C R++ ++CEL F+ HM D+   G  C+  N  RA   +  A ALGL++G           L +RI++F+R+LLEQ+HK+    ++  V S
Sbjct:  359 GDIILKDFRTMKTEHTIDAHPGKVSSLDLKGDLLVSCGLTRRMGRIYCEAVIKVFDIRQQARPLSHIPFSPGATILRFQPKFSSIVLATSA------SGAILLTDVQGVGADVQSY------QVDCESDHLLSTDVSSSGELLAFGDSGGYVHVWGASEHDLVNLHSLPTEVSLDFQARTSVKSVRMDAKLN---WVELPDIVQPLAENHVCELESFSDV------------FLPATTDVPFSAMDMSTPIRVGLPPRIVGKHLLEQMNAHDFVGYVPNP-YWRRGSSQGSASRAVAGIRNLRQTPKIDVKPQSTPVQRP-GVSVFTTKVTTKSGQSWLPKTYRRVEIKQSQYKL--KYEEFDFSYYNKT-RFAGLENDIVNSYCNALLQVLYFIPALQAAVTSHVCEREFCLTCELGFVLHMLDVAQGG-TCQPSNLLRALRQIKEAAALGLVEGPEEWENSKEKSLAKRIQSFSRFLLEQIHKEGAGSMDPEVPS 822          
BLAST of Ggra9708.t1 vs. uniprot
Match: A0A015LRX9 (PAN2-PAN3 deadenylation complex catalytic subunit PAN2 n=10 Tax=Rhizophagus TaxID=1129544 RepID=A0A015LRX9_RHIIW)

HSP 1 Score: 137 bits (345), Expect = 1.080e-29
Identity = 158/684 (23.10%), Postives = 277/684 (40.50%), Query Frame = 0
Query:   42 WYE--HSCTQVGHPNSHTDPIRALACDPVKELIWAATASGMLHAHQAPAMARIVFTYVGEPSSDPSNHGDVSDIVVSSACVLAAGSCGLAVVKRGGVLAASIRADTIRNAKALALNPVSDDYVCFEGESRMLAVVDVQQQRILRQATLRGATGVTAAVWTAPQAASSLAVFSTSTGRISLCDPSSMREVNAIAAFAGATTSIASSGYYLAATGLGTRGGVPYLEQTVKLYYIRAVQNPLPYVFFSAPPMFIAFDHATSQIYNTDGALWMLSPHGVMQLLDISTVTSREPAYPLCDEIH---LDAGSDVFTAMVVSSQGLLVLGDSGRFVHQWSSSESVKMNSSSEPVWTTPVNPEPPTPSIHMDDFINLDIGGTIPKCAMPEFECEYLTEELFTSVSNQPQRRKRGELYATRTSKGVVTTNDLYAREPFARFPLQISDEFLDVAQQHRYVAYSQAPPSFVRNSESGHRRPPIVRTTKRKYR-----LQGERGSSLPTGKPSNSA-----NRIDLSKPAERS-KYVERDLVAWE--SIEGFDFLKYNTSPRFCDLENALPNVYVKPAVQALYFCPPVRTAIGNH---SCHRDWFISCELSFLFHMFDLGGAGMACEAGNFTRAFMTMVNAGALGLLDGAHA---LRLLQRIENFTRYLLEQLHKDEGMEVESTVLSVFEAETRSH 701
            WYE   +C    + ++    I A+A DP +EL+W     G + +H    + R         +S  ++   V  I+VS   V++  S  + +  R G++  ++  +   +   +    + +  +   G+   + V++V +  ++++        V           S L     ++G ++L DP + +  + + A  G  + I + G  L   G   R G   ++  VK+Y IR ++ PL  + F   P F+      S        +++ S  G   + DI   +          +IH   ++  S V    + +S G+L  GD+  FVH W   +  K+N+ S P+           P+I     I      ++    MP ++      E   SV     R + G                          P +I  + L+  +   +V YS  P +  RN         +VR +++K++      + E+   L +GK S        N  +L   + +  KY +R  + +    ++ FDF  YN S R+  LE  + N Y    +Q L+F P +R    +H   +C ++  + CEL FLF M +    G  C+A NF RAF T+  A ALGL +             I+NF R++LEQLH++        +L     E  SH
Sbjct:    4 WYEVRTTCDTNINVSAPISAISAIAFDPYQELLWTGNEKGRVTSHFGSGLHRY--------TSFRAHLNPVRQILVSDKGVISLCSDSVKMTNRRGLIKWTLSNEDTTDLHCMTYTTMPNSEILAAGKQHNMLVINVARGIVVKKVESESDIVV--------MRKSRLICCGANSGEVTLMDPRTFKVEHRVQAHTGTISDIDTIGNLLLTCGSSARHGNLIIDPLVKVYDIRTMR-PLVPMPFPTGPCFLKMHPKLST------TVFIASRSGQFHVCDIGNTS----------DIHFYQVNTSSYVNAIDLSASGGMLAFGDAASFVHLWEDRKEAKINAYSNPI---------ELPTIQTPPNITTSERSSLSLIGMPYYK------EPLLSVWPSNMRFEVGNP------------------------PPKIDPDILNNMKMIDFVGYSPNPGNMKRNQ--------VVRYSRKKHKDGTPKFRSEKERELQSGKSSRGPSSLFDNEAELDATSTKMPKYYKRVEIQYSRFGVDDFDFEFYNKS-RYAGLETHIANSYCNSLLQVLFFTPVLRLITRSHIGTACTKENCLCCELGFLFRMLE-NARGRNCQASNFLRAFSTIPQALALGLFEPDEPDENTPYSMLIQNFNRFILEQLHQECNSNNNPRLLKSLPLEQTSH 605          
BLAST of Ggra9708.t1 vs. uniprot
Match: A0A369SGF6 (PAN2-PAN3 deadenylation complex catalytic subunit PAN2 n=2 Tax=Trichoplax TaxID=10227 RepID=A0A369SGF6_9METZ)

HSP 1 Score: 136 bits (343), Expect = 1.870e-29
Identity = 150/634 (23.66%), Postives = 265/634 (41.80%), Query Frame = 0
Query:   62 ALACDPVKELIWAATASGMLHAHQAPAMARIVFTYVGEPSSDPSNHGDVSDIVVSSACVLAAGSCGLAVVKRGGVLAASIRADT-IRNAKALALNPVSDDYVCFEGESRMLAVVDVQQQRILRQATLRGATGVTAAVWTAPQAASSLAVFSTSTGRISLCDPSSMREVNAIAAFAGATTSIASSGYYLAATGLGTRGGVPYLEQTVKLYYIRAVQNPLPYVFFSAPPMFIAFDHATSQ--IYNTDGALWMLSPHGVMQLLDISTVTSREPAYPLCDEIHLDAGSDVFTAMVVSSQGLLVLGDSGRFVHQWSSSESVKMNSSSEPVWTTPVNPEPPTPSIHMDD-FINLDIGGTIPKCAMPEFECEYLTEE---LFTSVSNQPQRRKRGELYATRTSKGVVTTNDLYAREPFARFPLQISDEFLDVAQQHRYVAYSQAPPSFVRNSESGHRRPPIVRTTKRKYRLQGERGSSLPTGKPSNSANRIDLSKPAERSKYVERDLVAWESI--EGFDFLKYNTSPRFCDLENALPNVYVKPAVQALYFCPPVRTAIGNHSCHRDWFISCELSFLFHMFDLGGAGMACEAGNFTRAFMTMVNAGALGLL--DGAHALR---LLQRIENFTRYLLEQLHKD 681
            A+  D  +EL+WAA ASG + ++ +  + R    Y+         +  +  ++  +  +L+     L +V RGG +  +IR ++ +   + + LNP + D     GE+ +L  VD++  +I +QA+   +  V           S      T+TG+++L DPS+++ +NAI A +G+ + I  S  +L   G  TR      ++ + +Y +R+++   P      P +     + TS+  + +  G   +  P   +    +         YPL  ++               S  +   GDS  ++H W++ E   MN+  +P  T     E   P + ++D F+ L    T+P         +Y  +    L +  SN+    K   L                           I  + L+  + + ++ Y+ AP ++ RN       P  +R T        E   ++     S+           E  K   R  + +  +  E F+F  YN +  F  LE  +PN Y    +Q LYF  P+   + NHSC ++   +CEL FLF M D    G  C+A NF RAF  +  A  LGL+  D   A +   L   I+++  ++L+QL +D
Sbjct:   22 AVCFDASEELLWAANASGFVGSYHSLQLLRYSSRYI--------QNSFIKQLLSINRGILSLSGEELKLVNRGGSIDFTIRDESSLYYMQCMCLNP-NHDKTYISGENNLLTQVDLRSAKITKQASTECSNAVLRY-----SNKSGYVCCGTTTGKVTLHDPSTLQCINAIDAHSGSISDIDVSDNFLVTCGFSTRHSHLNCDRFLMMYDLRSMRALNPIQVHFDPTLLKFMPNYTSRLAVVSHTGQFQICEPGVPLTPSSLIVQQIESTGYPLAFDVS-------------PSAQVFAFGDSEGYLHVWTNREDAMMNNFGQP--TEFAADENRLPYLDINDPFVRL---STVPM--------DYTYDSSGRLLSDWSNELTEVKDRRL-------------------------APIDPKILESMKMNNFIGYAPAPVNYKRNQM-----PYTIRATN-----ANELDDNIMDNNESDEEQDALSEYYGEIPKRYHRVAMKYSKLGLEDFNFESYNRT-NFAGLETDIPNAYCNSMLQVLYFLRPMCIGLQNHSCDKEPCFACELGFLFRMLDYS-KGQPCQANNFLRAFRAIPEAAGLGLILPDTEEAYKNANLAHLIQSWHLFVLQQLSRD 578          
BLAST of Ggra9708.t1 vs. uniprot
Match: A0A507CG16 (PAN2-PAN3 deadenylation complex catalytic subunit PAN2 n=1 Tax=Synchytrium microbalum TaxID=1806994 RepID=A0A507CG16_9FUNG)

HSP 1 Score: 134 bits (338), Expect = 7.470e-29
Identity = 175/666 (26.28%), Postives = 266/666 (39.94%), Query Frame = 0
Query:   45 HSCTQVGHPNSHTDP----IRALACDPVKELIWAATASGMLHAHQAPAMARIVFTYVGEPSSDPSNHGDVSDIVVSSACVLAAGSCGLAVVKRGGVLAASIRADTIRNAKALAL--NPVSDDYVCFEGESRMLAVVDVQQQRILRQATLRGATGVTAAVWTAPQAASSLAVFSTSTGRISLCDPSSMREVNAIAAFAGATTSIASSGYYLAATGLGTRGGVPYLEQTVKLYYIRAVQNPLPYVFFSAPPMFIAFDHATSQIYNTDGALWMLSPHGVMQLLDISTVTSREPAYPLCDEIHLDAGSDVFTAMVVSSQGLLV-LGDSGRFVHQWSSSESVKMNSSSEPVWTTPVNPEPPTPSIHMDDFINLDIGGTIPKCAMPEFECEYLTEELFTSVSNQPQRRKRGELYATRTSKGVVTTNDLYAREPFARFPLQISDEFLDVAQQHRYVAYSQAPPSFVRNSESGHRRPPIVRTTKRKYRLQGERGSS---LPTGK-----PSNSANRIDLSKPAERS--------KYVERDLVAWESIEGFDFLKYNTSPRFCDLENALPNVYVKPAVQALYFCPPVRTAIGNH---SCHRDWFISCELSFLFHMFDLGGAGMACEAGNFTRAFMTMVNAGALGLLD---GAHALRLLQRIENFTRYLLEQLHKD 681
            H   +VG     TDP    I A++ DP +ELIW         AH                       G VS + V+   V + G     +  R G+   +++ +  +   A+ L   P S++ V   GE   L +V++ +  I R   L  + GV   V       S L    T+ G+I L DP S R  + I A +G+   +  +GY L   G   R G    E  VK+Y +R ++  LP V F+A   F+ F      +        + S +G  Q+ D+   ++    Y      HL+      T + VSS G +V  GD    ++Q++     K+N  S P    P  P   T       +I LD    +    M      Y TE L +   N P                        A +P    P  I  E L   +   +V Y+Q P +F RN              + K+R + ER      +P  K     P +    +D +  A  S        + VE     +  +E FDF  YN +P +  LE  + + Y    VQ L+F    R     H   SC++++ ++CEL FLF M +  G G+ C+A NF RAF T+  A ALGLL+       +     I++  R++LEQ H++
Sbjct:    7 HEIRRVG-----TDPSLRGITAISSDPSEELIWIGNTQASFKAHA----------------------GAVSQLAVTDYGVFSVGGNTARLTARRGLPQWTVQEENTKKMIAMCLPTTPSSNELVV-AGEPTTLMLVNIHRGTITR---LLDSAGVETKV----MRKSRLLCCGTANGKIMLRDPRSYRVEHTIDAHSGSVNDMDVAGYTLMTCGSSERAGAHVREPLVKIYDLRTMRA-LPPVSFTARASFLRF------LPKLSSTALIGSSNGQFQICDVMNNSAAIQFY------HLEGTGSPLTVLDVSSSGEVVTFGDGSGVLYQYADRPQGKINMYSRPS-EYPTLPRNTT-------YIGLDDDRPLNSIGM-----SYYTEPLLSVFPNTP----------------------FPAHQP----PAFIPSEILSNVKMIDFVGYAQNPNTFRRNQRLRDTSKAREDMEQPKFRSEQERAQMRKPVPDNKKQRERPLDGGGAVDDASDAVGSENGIPRAYRLVEIKYSRF-GVEDFDFAFYNKTP-YSGLETHIQSSYCNAIVQVLFFNHVFREIAKAHIRLSCNKEFCLTCELGFLFRMLE-DGKGVNCQATNFLRAFATLPQAAALGLLELDVVTTPVSYSSMIQSCNRFILEQAHQE 582          
BLAST of Ggra9708.t1 vs. uniprot
Match: A0A6L2Q966 (USP domain-containing protein (Fragment) n=1 Tax=Coptotermes formosanus TaxID=36987 RepID=A0A6L2Q966_COPFO)

HSP 1 Score: 134 bits (336), Expect = 1.730e-28
Identity = 137/482 (28.42%), Postives = 216/482 (44.81%), Query Frame = 0
Query:  215 GRISLCDPSSMREVNAIAAFAGATTSIASSGYYLAATGLGTRGGVPYLEQTVKLYYIRAVQNPLPYVFFSAPPMFIAFDHATSQIYNTDGALWMLSPHGVMQLLDISTVTSREPAYPLCDEIHLDAGSDVFTAMVVSSQGLLVLGDSGRFVHQWSSSESVKM-NS-SSEPVWTTPVNPEPPTPSIHMDDFINLDIGGTIPKCAMPEFECEYLTEELFTSVSNQPQRRKRGELYATRTSKGVVTTNDLYAREPFARFPLQISDEFLDVAQQHRYVAYSQAPPSFVRNSES--------GHRRPPIVRTTKRKYRLQGERGSSLPTGKPSNSANRIDLSKPAERSKYVERDL-VAWESIEGFDFLKYNTSPRFCDLENALPNVYVKPAVQALYFCPPVRTAIGNHSCHRDWFISCELSFLFHMFDLGGAGMACEAGNFTRAFMTMVNAGALGLL------DGAHALRLLQRIENFTRYLLEQLH 679
            GRI L DP++++  +++ A +G+ +     G  L   G   R G   +++ + +Y +R ++   P +     P+ + F  + S    T  AL      G MQL+D  TV   +P   LC      AGS      V SS   +  GD G  +H ++S+    M NS S E  +  PV P PP  SI +DD          P  ++P   C+  T  L    S+ P++                     Y ++ + R P  I  E L   +    + Y+  P S  RN  +        GHR+  +     R             TGK    AN + + K     +Y + D+  +   +E FDF +YN + +F  LE  LPN Y    +Q LYF  PVR+ + +H C +++ ++CEL +LFHM D    G  C++ NF RAF T+  A ALGL+      +    + L+Q I+++ R++L Q+H
Sbjct:  647 GRIDLRDPNTLKVEHSLEAHSGSLSDFDVHGNLLVTCGFSNRQGNLSVDRFLMVYDLRVMRAVTP-IQVMLDPLLLRFLPSFSSRLVTVSAL------GQMQLVD--TVALSQPN--LCLYQINTAGSMCLALDVSSSCQCMAFGDGGGSIHFYTSNPHTAMFNSFSRETEFADPVEPLPPI-SI-LDD--------VTPLSSVPLPYCQQGTALL----SDWPEQ---------------------YLKKVYRRTP-PIDPEILRTMKMQGTIGYAPNPMSCRRNQVAYKLEKYGGGHRQTKLFSNDSR-------------TGKSGEEANFVAIPK-----RYRKIDVKYSKMGMEDFDFEQYNKT-KFSGLEATLPNSYCNAMLQVLYFMSPVRSILLSHLCQKEFCLACELGYLFHMLDTS-QGFPCQSSNFLRAFRTVPEASALGLILSDQNPESKKKVNLIQLIQSWNRFILHQIH 1061          
BLAST of Ggra9708.t1 vs. uniprot
Match: A0A6J8DUX2 (PAN2 n=1 Tax=Mytilus coruscus TaxID=42192 RepID=A0A6J8DUX2_MYTCO)

HSP 1 Score: 132 bits (333), Expect = 1.750e-28
Identity = 120/477 (25.16%), Postives = 208/477 (43.61%), Query Frame = 0
Query:  215 GRISLCDPSSMREVNAIAAFAGATTSIASSGYYLAATGLGTRGGVPYLEQTVKLYYIRAVQNPLPYVFFSAPPMFIAFDHATSQIYNTDGALWMLSPHGVMQLLDISTVTSREPAYPLCDEIHLDAGSDVFTAMVVSSQGLLVLGDSGRFVHQWSSSESVKMNSSSEPVWTTPVNPEPPTPSIHMDDFINLDIGGTIPKCAMPEFECEYLTEELFTSVSNQPQRRKRGELYATRTSKGVVTTNDLYAREPFARFPLQISDEFLDVAQQHRYVAYSQAPPSFVRNSESGHRRPPIVRTTKRKYRLQGERGSSLPTGKPSNSANRIDLSKPAERSKYVERDLVAWESIEGFDFLKYNTSPRFCDLENALPNVYVKPAVQALYFCPPVRTAIGNHSCHRDWFISCELSFLFHMFDLGGAGMACEAGNFTRAFMTMVNAGALGLL-----DGAHALRLLQRIENFTRYLLEQLHKDEGMEV 686
            G++ L DP+++R  + + A  G  +     G  L   G   R     +++ + +Y +R ++   P +     PMF+ F H    IY+    L ++S  G  Q++D +++       PL  +     GS + +  +  +  +L  GDSG ++H+++S E    N+  +P  T   +P      +H++D   +     IP C                     P+  K    +    ++ V             R P+ + +E L   +    V Y++ P    + S  G  + P      +K   +G+     P G+  +    +         KY +  L      E FDF  YN +  F  LE  +PN Y    +Q LY+  P+R A+ NH C +++ +SCEL FLFHM D    G  C+A NF RAF T+  A ALGL+     +    + LL+ I++++R++  Q+H + G +V
Sbjct:  230 GKVRLYDPATLRAEHVLDAHNGTLSDFDLQGNLLVTCGFSARQNQMTVDRFLMVYDMRVMRAMAP-IQIIIDPMFLRFVH----IYSNK--LMIVSQAGQFQIIDTNSLAPT----PLSMQPVNTHGSFITSFDISETCHVLAFGDSGGYLHEFASGEHPVFNTFPQP--TEFADPTEQLQFMHIND--EMTPYSVIPMC--------------------YPENGKMLSDWPDHLAQNVY------------RKPMPVDNEILRSMKVQHNVGYAKLP----QGSGIGVNQIPYNIGNDKKGSKKGKSVPESPIGRGEDPFVVVPKRYQKVDLKYSKLGL------EDFDFRHYNKT-HFAGLETGIPNAYCNCMLQVLYYIEPLRVALLNHLCKKEFCLSCELGFLFHMLD-SQKGQTCQATNFLRAFRTIPEASALGLVLSENEENESRINLLRLIQSWSRFIFHQVHSEAGKKV 647          
The following BLAST results are available for this feature:
BLAST of Ggra9708.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J2390.000e+073.60PAB-dependent poly(A)-specific ribonuclease subuni... [more]
R7QR645.590e-27258.02USP domain-containing protein n=1 Tax=Chondrus cri... [more]
A0A5J4YMM71.200e-4728.98PAB-dependent poly(A)-specific ribonuclease subuni... [more]
PAN2-PAN3 deadenylation complex catalytic subunit Pan2-like isoform X1 n=4 Tax=Haliotis TaxID=6452 RepID=UPI001EE630C15.230e-3127.33PAN2-PAN3 deadenylation complex catalytic subunit ... [more]
A9S9L21.310e-3027.77PAN2-PAN3 deadenylation complex catalytic subunit ... [more]
A0A015LRX91.080e-2923.10PAN2-PAN3 deadenylation complex catalytic subunit ... [more]
A0A369SGF61.870e-2923.66PAN2-PAN3 deadenylation complex catalytic subunit ... [more]
A0A507CG167.470e-2926.28PAN2-PAN3 deadenylation complex catalytic subunit ... [more]
A0A6L2Q9661.730e-2828.42USP domain-containing protein (Fragment) n=1 Tax=C... [more]
A0A6J8DUX21.750e-2825.16PAN2 n=1 Tax=Mytilus coruscus TaxID=42192 RepID=A0... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 39..378
e-value: 1.1E-38
score: 135.1
IPR028881PAN2 domainPFAMPF13423UCH_1coord: 577..694
e-value: 1.5E-20
score: 74.1
NoneNo IPR availableGENE3D3.90.70.10Cysteine proteinasescoord: 549..706
e-value: 7.2E-29
score: 102.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 499..540
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..21
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 525..540
NoneNo IPR availablePANTHERPTHR15728DEADENYLATION COMPLEX CATALYTIC SUBUNIT PAN2coord: 49..701
NoneNo IPR availableSUPERFAMILY101898NHL repeatcoord: 50..371

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000084_piloncontigtig00000084_pilon:530667..532799 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra9708.t1Ggra9708.t1Gracilaria gracilis GNS1m malemRNAtig00000084_pilon 530667..532799 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra9708.t1 ID=Ggra9708.t1|Name=Ggra9708.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=711bp
MNSQFVPPRSPPADEAQAPPVYSEAEQYYYDGAAEHRPPHGWYEHSCTQV
GHPNSHTDPIRALACDPVKELIWAATASGMLHAHQAPAMARIVFTYVGEP
SSDPSNHGDVSDIVVSSACVLAAGSCGLAVVKRGGVLAASIRADTIRNAK
ALALNPVSDDYVCFEGESRMLAVVDVQQQRILRQATLRGATGVTAAVWTA
PQAASSLAVFSTSTGRISLCDPSSMREVNAIAAFAGATTSIASSGYYLAA
TGLGTRGGVPYLEQTVKLYYIRAVQNPLPYVFFSAPPMFIAFDHATSQIY
NTDGALWMLSPHGVMQLLDISTVTSREPAYPLCDEIHLDAGSDVFTAMVV
SSQGLLVLGDSGRFVHQWSSSESVKMNSSSEPVWTTPVNPEPPTPSIHMD
DFINLDIGGTIPKCAMPEFECEYLTEELFTSVSNQPQRRKRGELYATRTS
KGVVTTNDLYAREPFARFPLQISDEFLDVAQQHRYVAYSQAPPSFVRNSE
SGHRRPPIVRTTKRKYRLQGERGSSLPTGKPSNSANRIDLSKPAERSKYV
ERDLVAWESIEGFDFLKYNTSPRFCDLENALPNVYVKPAVQALYFCPPVR
TAIGNHSCHRDWFISCELSFLFHMFDLGGAGMACEAGNFTRAFMTMVNAG
ALGLLDGAHALRLLQRIENFTRYLLEQLHKDEGMEVESTVLSVFEAETRS
HGTFMGSKTD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR028881PAN2_dom