Ggra9706.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra9706.t1
Unique NameGgra9706.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length200
Homology
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BLAST of Ggra9706.t1 vs. uniprot
Match: A0A2V3IXL7 (Chromoplast-specific carotenoid-associated protein C1, chromoplastic n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IXL7_9FLOR)

HSP 1 Score: 204 bits (520), Expect = 3.820e-63
Identity = 92/140 (65.71%), Postives = 113/140 (80.71%), Query Frame = 0 
Query:    2 LEDNYPPQFPTRVQRLSGRWRLAYTSSAITRYFGGVPGLQRLLPNATVGDITQTIDLEDGTSTFEEHVTFVLSVIGNEVSLDVLVQGRLRATNEERQIWDPENVKCGFLSWLADSWKTFRAFRIAGITYLDDDLCVARGQ 141
            LEDNYPPQ PT+  R SG WRL YTSS+ITRYFGGV GLQRLLPNA+VG+I Q ID E G   F E ++F + ++GNEV LD+ ++GR+RA +EERQ+W+PE+VKCG  SW ADSWKTFRAF++A ITYLDD+L + RGQ
Sbjct:   90 LEDNYPPQVPTKDPRNSGSWRLKYTSSSITRYFGGVTGLQRLLPNASVGEIIQEIDSEGGKCMFSEKISFEVPIVGNEVCLDIRIEGRMRAASEERQLWEPESVKCGVFSWFADSWKTFRAFQVADITYLDDELRITRGQ 229
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BLAST of Ggra9706.t1 vs. uniprot
Match: R7QI70 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QI70_CHOCR)

HSP 1 Score: 125 bits (314), Expect = 1.920e-33
Identity = 58/123 (47.15%), Postives = 79/123 (64.23%), Query Frame = 0 
Query:   19 GRWRLAYTSSAITRYFGGVPGLQRLLPNATVGDITQTIDLEDGTSTFEEHVTFVLSVIGNEVSLDVLVQGRLRATNEERQIWDPENVKCGFLSWLADSWKTFRAFRIAGITYLDDDLCVARGQ 141
            G W L YTSS+ITR+FGG  GLQRLLP   VG + Q ID E+GT    E ++F + ++G  +    +  G +RAT++ RQ WDP+ V+  F    AD WKT RAF+IA  ++LD+ L + RGQ
Sbjct:    3 GTWELLYTSSSITRFFGGATGLQRLLPAGEVGRVEQYIDAENGTCEVREELSFEVPIVGTPMKKIAVASGTIRATSQTRQAWDPKEVQFYFFKQFADGWKTLRAFQIADTSFLDESLRITRGQ 125
The following BLAST results are available for this feature:
BLAST of Ggra9706.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3IXL73.820e-6365.71Chromoplast-specific carotenoid-associated protein... [more]
R7QI701.920e-3347.15Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006843Plastid lipid-associated protein/fibrillin conserved domainPFAMPF04755PAP_fibrillincoord: 2..71
e-value: 3.6E-7
score: 30.3

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000084_piloncontigtig00000084_pilon:525380..525979 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra9706.t1Ggra9706.t1Gracilaria gracilis GNS1m malemRNAtig00000084_pilon 525380..525979 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra9706.t1 ID=Ggra9706.t1|Name=Ggra9706.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=200bp
MLEDNYPPQFPTRVQRLSGRWRLAYTSSAITRYFGGVPGLQRLLPNATVG
DITQTIDLEDGTSTFEEHVTFVLSVIGNEVSLDVLVQGRLRATNEERQIW
DPENVKCGFLSWLADSWKTFRAFRIAGITYLDDDLCVARGQMFDRFPENS
REQSGRYIVQNTFGKPHNFLFWSKSLIVHTTQNQSDSTHAYRRFARWQV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006843PAP/fibrillin_dom