Ggra9704.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra9704.t1
Unique NameGgra9704.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length126
Homology
BLAST of Ggra9704.t1 vs. uniprot
Match: A0A2V3INM9 (GTP 3',8-cyclase, mitochondrial n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3INM9_9FLOR)

HSP 1 Score: 155 bits (391), Expect = 2.990e-44
Identity = 75/124 (60.48%), Postives = 92/124 (74.19%), Query Frame = 0
Query:    1 MAAGLSAVNLSLDSLCPHTFALLTRRPAATHARVLSELNDALEQPGLAVKLNVVVMSPINDASVPQFAALTEHQPLDMRFIEYMSFDRNQWRHASFVPYSYMLQTLARHYGRLQHEPTQATDTS 124
            + AG+S +NLSLDSLCPHTF+LLTRRP   H RVLS L+DA+ +P L+VKLNVVVMSP N  ++P F  LTE  PL +RFIEYM F  N+W+HASFVPYS ML+++  HYG L    T   DT+
Sbjct:   78 LRAGVSGINLSLDSLCPHTFSLLTRRPPQVHERVLSALHDAVTEPSLSVKLNVVVMSPHNHLTLPDFVRLTESHPLSVRFIEYMPFAGNRWKHASFVPYSEMLRSITHHYGPLSAVATHPNDTA 201          
BLAST of Ggra9704.t1 vs. uniprot
Match: R7QKM4 (Radical SAM core domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QKM4_CHOCR)

HSP 1 Score: 114 bits (285), Expect = 1.970e-28
Identity = 64/123 (52.03%), Postives = 79/123 (64.23%), Query Frame = 0
Query:    2 AAGLSAVNLSLDSLCPHTFALLTRRPAATHARVLSELNDALEQPGLAVKLNVVVMSPINDASVPQFAALTEHQPLDMRFIEYMSFDRNQWRHASFVPYSYMLQTLARHYGRLQHEPTQATDTS 124
            AAGLS VN+SLD+L    F  + RR    HARVL+ +  A E    AVK+NVVVM  +ND  +P FAALTEH  +D+RFIEYM FD N+W     VPY+ ML ++AR YGRL+       DTS
Sbjct:   82 AAGLSGVNISLDTLHAAKFERIARRKG--HARVLAAIQTAAEAGLDAVKVNVVVMKGVNDDELPAFAALTEHMRVDVRFIEYMPFDGNRWSADKLVPYADMLDSVARAYGRLERASDSPNDTS 202          
BLAST of Ggra9704.t1 vs. uniprot
Match: A0A8B7NVY5 (molybdenum cofactor biosynthesis protein 1-like n=1 Tax=Hyalella azteca TaxID=294128 RepID=A0A8B7NVY5_HYAAZ)

HSP 1 Score: 105 bits (263), Expect = 4.660e-24
Identity = 58/121 (47.93%), Postives = 74/121 (61.16%), Query Frame = 0
Query:    4 GLSAVNLSLDSLCPHTFALLTRRPAATHARVLSELNDALEQPGLAVKLNVVVMSPINDASVPQFAALTEHQPLDMRFIEYMSFDRNQWRHASFVPYSYMLQTLARHYGRLQHEPTQATDTS 124
            GL+ +N+SLD+L P  F  +TRR    H RV+  +  AL  P  AVKLNVVVM   ND  +  F  LTE QPLD+RFIEYM FD N+W+ A  +PYS ML T+ + +   Q    +  DTS
Sbjct:  165 GLTHINISLDTLVPQKFEFITRRKG--HQRVMDGIQVALAAPLQAVKLNVVVMRGTNDDELVDFVRLTEQQPLDIRFIEYMPFDGNRWQAARMMPYSEMLSTITQKFPDTQRISDKPNDTS 283          
BLAST of Ggra9704.t1 vs. uniprot
Match: A0A1X7V7I0 (Radical SAM core domain-containing protein n=1 Tax=Amphimedon queenslandica TaxID=400682 RepID=A0A1X7V7I0_AMPQE)

HSP 1 Score: 104 bits (259), Expect = 1.250e-23
Identity = 55/122 (45.08%), Postives = 75/122 (61.48%), Query Frame = 0
Query:    3 AGLSAVNLSLDSLCPHTFALLTRRPAATHARVLSELNDALEQPGLAVKLNVVVMSPINDASVPQFAALTEHQPLDMRFIEYMSFDRNQWRHASFVPYSYMLQTLARHYGRLQHEPTQATDTS 124
            AGLS+VN+SLD+L P  F  ++RR    H RVL+ ++ A++     VK+N VVM  +ND  +  F ALTE +P+D+RFIEYM FD N+W    F+PY  ML +L  +Y  L        DTS
Sbjct:  140 AGLSSVNISLDTLIPQKFEFISRRRG--HERVLNAIDSAIDSGINPVKVNCVVMRGVNDDELNDFVALTEEKPIDVRFIEYMPFDGNKWNTKRFLPYHEMLSSLQNYYPSLARHQDSENDTS 259          
BLAST of Ggra9704.t1 vs. uniprot
Match: A0A7R8W456 (GTP 3',8-cyclase n=1 Tax=Cyprideis torosa TaxID=163714 RepID=A0A7R8W456_9CRUS)

HSP 1 Score: 98.6 bits (244), Expect = 5.030e-22
Identity = 55/122 (45.08%), Postives = 70/122 (57.38%), Query Frame = 0
Query:    3 AGLSAVNLSLDSLCPHTFALLTRRPAATHARVLSELNDALEQPGLAVKLNVVVMSPINDASVPQFAALTEHQPLDMRFIEYMSFDRNQWRHASFVPYSYMLQTLARHYGRLQHEPTQATDTS 124
            AGL  +N+SLD+L P  F L+TRR      RV+  +  A+E     VK+NVVVM  IND  +  F A TEHQPL++RFIEYM FD N+W     VPY  ML  +   +  L+       DTS
Sbjct:  150 AGLDKINISLDTLVPAKFELMTRRLG--FERVMDGIEKAIELGYSPVKINVVVMRGINDEEISDFVAWTEHQPLNIRFIEYMPFDGNKWNTKKMVPYFEMLDRVKAQWPALERMKDSPNDTS 269          
BLAST of Ggra9704.t1 vs. uniprot
Match: A0A316UMI5 (Molybdenum cofactor biosynthesis prote n=1 Tax=Jaminaea rosea TaxID=1569628 RepID=A0A316UMI5_9BASI)

HSP 1 Score: 99.0 bits (245), Expect = 6.280e-22
Identity = 56/127 (44.09%), Postives = 81/127 (63.78%), Query Frame = 0
Query:    1 MAAGLSAVNLSLDSLCPHTFALLTRRPAATHARVLSELNDALEQ-PGLAVKLNVVVMSPINDASVPQFAALTEHQPLDMRFIEYMSFDRNQWRHASFVPYSYMLQTL--ARHYGRLQHEPTQATDTS 124
            +AAGL+ VN+S+DSL P  FA ++R+   T ARVL+ ++D+L   P L VKLNVVV+  +ND  V  F  +T H+ LD+RFIEYM F+ N W   + +P + +LQ +  A   G +Q    +A DT+
Sbjct:  188 VAAGLTHVNISIDSLLPDRFASISRQSPKTLARVLATIDDSLRYAPQLKVKLNVVVIKGMNDDEVASFVEMTRHRNLDVRFIEYMPFNSNAWSTQALIPAAELLQRVQAAHPPGSVQRHVDEANDTT 314          
BLAST of Ggra9704.t1 vs. uniprot
Match: A0A1X2GM41 (GTP 3',8-cyclase n=1 Tax=Hesseltinella vesiculosa TaxID=101127 RepID=A0A1X2GM41_9FUNG)

HSP 1 Score: 97.4 bits (241), Expect = 1.060e-21
Identity = 52/122 (42.62%), Postives = 74/122 (60.66%), Query Frame = 0
Query:    3 AGLSAVNLSLDSLCPHTFALLTRRPAATHARVLSELNDALEQPGLAVKLNVVVMSPINDASVPQFAALTEHQPLDMRFIEYMSFDRNQWRHASFVPYSYMLQTLARHYGRLQHEPTQATDTS 124
            AGL A+N+SLD+L PH F ++TRR      RV+  L+ A+E     +KLN VVM  +ND  V  F ALT+  P+ +RFIEYM FD NQW+    VPY  ++Q +   +G+++       DT+
Sbjct:  124 AGLDALNISLDTLDPHMFEIMTRRKGFD--RVMEALDRAIEIGIPRIKLNCVVMRGVNDDQVLDFVALTKTMPIRVRFIEYMPFDGNQWKRDKLVPYQELIQRIGSTFGQMEKCTDDPNDTT 243          
BLAST of Ggra9704.t1 vs. uniprot
Match: A0A553PEX8 (GTP 3',8-cyclase n=1 Tax=Tigriopus californicus TaxID=6832 RepID=A0A553PEX8_TIGCA)

HSP 1 Score: 97.8 bits (242), Expect = 1.270e-21
Identity = 58/125 (46.40%), Postives = 71/125 (56.80%), Query Frame = 0
Query:    1 MAAGLSAVNLSLDSLCPHTFALLTRRPAATHARVLSELNDALEQPGL-AVKLNVVVMSPINDASVPQFAALTEHQPLDMRFIEYMSFDRNQWRHASFVPYSYMLQTLARHYGRLQHEPTQATDTS 124
            MAAGL A+N+SLD+L    F  +TRR    H RVL  + DA        VK+N VVM  +N+  VP F  LT   P+D+RFIEYM FD N+W    FVPY  ML +L + Y  L     Q  DTS
Sbjct:  172 MAAGLDALNISLDTLIKPKFEHITRRRG--HDRVLQAIQDASSSGHFDRVKVNCVVMRGMNEEEVPNFVELTREWPIDIRFIEYMPFDGNKWLLKKFVPYQEMLNSLRKSYPELVRISDQPNDTS 294          
BLAST of Ggra9704.t1 vs. uniprot
Match: A0A316ZAN5 (GTP 3',8-cyclase n=1 Tax=Tilletiopsis washingtonensis TaxID=58919 RepID=A0A316ZAN5_9BASI)

HSP 1 Score: 97.8 bits (242), Expect = 1.770e-21
Identity = 55/124 (44.35%), Postives = 76/124 (61.29%), Query Frame = 0
Query:    2 AAGLSAVNLSLDSLCPHTFALLTRRPAATHARVLSELNDALEQPGLAVKLNVVVMSPINDAS-VPQFAALTEHQPLDMRFIEYMSFDRNQWRHASFVPYSYMLQTLARHYGRLQHEPTQATDTS 124
            AAGL+ +N+SLD+L PH F L+TRR  A  ARVL+    +++  GL  KLNVVV+  +ND+  V  F     H+ + +RFIEYM FD N+WR    VPY  +L+ +   +G L+     A DTS
Sbjct:  197 AAGLTHLNISLDTLDPHLFELITRRSGAGVARVLAAAEQSVKL-GLTTKLNVVVVRGVNDSKDVLDFVEWARHRDIVVRFIEYMPFDGNKWRPEKLVPYRVLLERIVERFGPLEKVGDTANDTS 319          
BLAST of Ggra9704.t1 vs. uniprot
Match: A0A2P6S6U5 (GTP 3',8-cyclase n=2 Tax=Rosoideae TaxID=171638 RepID=A0A2P6S6U5_ROSCH)

HSP 1 Score: 97.1 bits (240), Expect = 2.560e-21
Identity = 52/121 (42.98%), Postives = 72/121 (59.50%), Query Frame = 0
Query:    4 GLSAVNLSLDSLCPHTFALLTRRPAATHARVLSELNDALEQPGLAVKLNVVVMSPINDASVPQFAALTEHQPLDMRFIEYMSFDRNQWRHASFVPYSYMLQTLARHYGRLQHEPTQATDTS 124
            GLSAVN+SLD+L P  F  LTRR    H RV+  +N A++     VK+N V+M   ND  +  F  LT  +P+++RFIE+M FD N W     VPY+ ML  +A+H+  L+      TDT+
Sbjct:  182 GLSAVNISLDTLVPAKFEFLTRRRG--HERVMDSINAAIDLGYNPVKVNCVIMRGFNDDEICNFVELTREKPINIRFIEFMPFDGNVWNVKKLVPYAEMLDRVAKHFTGLKRLQDHPTDTA 300          
The following BLAST results are available for this feature:
BLAST of Ggra9704.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3INM92.990e-4460.48GTP 3',8-cyclase, mitochondrial n=1 Tax=Gracilario... [more]
R7QKM41.970e-2852.03Radical SAM core domain-containing protein n=1 Tax... [more]
A0A8B7NVY54.660e-2447.93molybdenum cofactor biosynthesis protein 1-like n=... [more]
A0A1X7V7I01.250e-2345.08Radical SAM core domain-containing protein n=1 Tax... [more]
A0A7R8W4565.030e-2245.08GTP 3',8-cyclase n=1 Tax=Cyprideis torosa TaxID=16... [more]
A0A316UMI56.280e-2244.09Molybdenum cofactor biosynthesis prote n=1 Tax=Jam... [more]
A0A1X2GM411.060e-2142.62GTP 3',8-cyclase n=1 Tax=Hesseltinella vesiculosa ... [more]
A0A553PEX81.270e-2146.40GTP 3',8-cyclase n=1 Tax=Tigriopus californicus Ta... [more]
A0A316ZAN51.770e-2144.35GTP 3',8-cyclase n=1 Tax=Tilletiopsis washingtonen... [more]
A0A2P6S6U52.560e-2142.98GTP 3',8-cyclase n=2 Tax=Rosoideae TaxID=171638 Re... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013785Aldolase-type TIM barrelGENE3D3.20.20.70Aldolase class Icoord: 1..124
e-value: 6.1E-20
score: 73.4
NoneNo IPR availablePANTHERPTHR22960MOLYBDOPTERIN COFACTOR SYNTHESIS PROTEIN Acoord: 2..120
NoneNo IPR availablePANTHERPTHR22960:SF0MOLYBDENUM COFACTOR BIOSYNTHESIS PROTEIN 1coord: 2..120
NoneNo IPR availableSUPERFAMILY102114Radical SAM enzymescoord: 2..114

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000084_piloncontigtig00000084_pilon:518899..519276 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra9704.t1Ggra9704.t1Gracilaria gracilis GNS1m malemRNAtig00000084_pilon 518899..519276 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra9704.t1 ID=Ggra9704.t1|Name=Ggra9704.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=126bp
MAAGLSAVNLSLDSLCPHTFALLTRRPAATHARVLSELNDALEQPGLAVK
LNVVVMSPINDASVPQFAALTEHQPLDMRFIEYMSFDRNQWRHASFVPYS
YMLQTLARHYGRLQHEPTQATDTSM*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013785Aldolase_TIM