Ggra9702.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra9702.t1
Unique NameGgra9702.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length163
Homology
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BLAST of Ggra9702.t1 vs. uniprot
Match: A0A2V3J6K8 (CBS domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J6K8_9FLOR)

HSP 1 Score: 184 bits (466), Expect = 4.290e-51
Identity = 115/156 (73.72%), Postives = 132/156 (84.62%), Query Frame = 0 
Query:    5 FRDKLDSTINAAREALEANEFGEAMSCYSNAIRVETAYLKFMPSETLSASLRLGRAKCYKALEDYDMALEDYEAAMQIEPESGSGHKGCXXXXXXXXXXXXXXXXXXXXXXXXXADDEVKNETEMIKRIHPDPLDTMKAEIVKLGALLGSMKLPGN 160
            FR++LDS  NAAREALEA+E+G+AM+CYSNAIRVE AYLK +PS+   ASLRLGRAKCYKALEDYDMALEDYE  +++EPES +GHKGC XXXXXXXXXXXXXXXXXXXXXXX ADDEV  E  ++K + PDP++  KAEI KLGALLG M LPG 
Sbjct:  670 FREELDSASNAAREALEASEYGDAMNCYSNAIRVENAYLKLVPSDAPRASLRLGRAKCYKALEDYDMALEDYETTIELEPESVAGHKGCGXXXXXXXXXXXXXXXXXXXXXXXPADDEVNKEISLLKNLLPDPMEGKKAEIAKLGALLGGMNLPGK 825
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BLAST of Ggra9702.t1 vs. uniprot
Match: R7QPC9 (TPR repeat-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QPC9_CHOCR)

HSP 1 Score: 165 bits (418), Expect = 1.760e-44
Identity = 112/156 (71.79%), Postives = 129/156 (82.69%), Query Frame = 0 
Query:    5 FRDKLDSTINAAREALEANEFGEAMSCYSNAIRVETAYLKFMPSETLSASLRLGRAKCYKALEDYDMALEDYEAAMQIEPESGSGHKGCXXXXXXXXXXXXXXXXXXXXXXXXXADDEVKNETEMIKRIHPDPLDTMKAEIVKLGALLGSMKLPGN 160
            FRD+LDS  NAAR+ALEA EFG AMSCYSNA+RVE+AYL+ +  E  +A LRLGRAKCYKALED+DMALEDYEAA  +EPES + HKG XXXXXXXXXXXXXXXXXXXXXXXXXAD++V  E ++I+ + PDPL + K EI KLGALLG M LPG 
Sbjct:  653 FRDELDSAGNAARQALEAGEFGVAMSCYSNALRVESAYLQLVEDERGTAGLRLGRAKCYKALEDFDMALEDYEAAALLEPESVAAHKGSXXXXXXXXXXXXXXXXXXXXXXXXXADEDVNKEMQLIRVMLPDPLQSKKEEIAKLGALLGGMNLPGK 808
The following BLAST results are available for this feature:
BLAST of Ggra9702.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3J6K84.290e-5173.72CBS domain-containing protein n=1 Tax=Gracilariops... [more]
R7QPC91.760e-4471.79TPR repeat-containing protein n=1 Tax=Chondrus cri... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019734Tetratricopeptide repeatSMARTSM00028tpr_5coord: 9..42
e-value: 140.0
score: 4.9
coord: 53..86
e-value: 9.8E-6
score: 35.1
coord: 87..120
e-value: 0.59
score: 19.2
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 53..86
score: 10.5614
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 4..142
e-value: 1.5E-22
score: 81.9
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 8..129
IPR001440Tetratricopeptide repeat 1PFAMPF00515TPR_1coord: 57..85
e-value: 1.4E-6
score: 27.8
IPR045248Heat shock protein Sti1-likePANTHERPTHR22904TPR REPEAT CONTAINING PROTEINcoord: 14..139
NoneNo IPR availablePANTHERPTHR22904:SF394STRESS-INDUCED-PHOSPHOPROTEIN 1coord: 14..139

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000084_piloncontigtig00000084_pilon:474813..475301 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra9702.t1Ggra9702.t1Gracilaria gracilis GNS1m malemRNAtig00000084_pilon 474813..475301 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra9702.t1 ID=Ggra9702.t1|Name=Ggra9702.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=163bp
MQRRFRDKLDSTINAAREALEANEFGEAMSCYSNAIRVETAYLKFMPSET
LSASLRLGRAKCYKALEDYDMALEDYEAAMQIEPESGSGHKGCGKCLAEL
EQVEKALTSYKMAYKLDPADDEVKNETEMIKRIHPDPLDTMKAEIVKLGA
LLGSMKLPGNLP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019734TPR_repeat
IPR011990TPR-like_helical_dom_sf
IPR001440TPR_1
IPR045248Sti1-like