Ggra9701.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra9701.t1
Unique NameGgra9701.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length148
Homology
BLAST of Ggra9701.t1 vs. uniprot
Match: A0A2V3J0I4 (Shikimate dehydrogenase (NADP(+)) n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J0I4_9FLOR)

HSP 1 Score: 187 bits (475), Expect = 5.980e-54
Identity = 92/146 (63.01%), Postives = 111/146 (76.03%), Query Frame = 0
Query:    2 DQILTDMRQVGADVCKIFMAATPALENCVVFKALQKTPRASVILAIGKAGQPSRILAPKYGSYLTFASVGAESESAPGQIHASSLHQIYRFHEIKPGTPVYGVIDNPISQSMSPALHTVAMTASDIKGVFLAFKVKDHYPEFIRNI 147
            DQIL  MR  GAD+CKI M AT AL+NC VF AL++    S+ILA+G+ GQP+RILAPK+ SYL+FA+VG  + SAPGQI A SL Q+YRFH+IKP TP YGVI NPIS SMSPALH  AM  + + GVF+A KV+  YPEFIR +
Sbjct:  190 DQILDKMRSAGADICKIAMTATSALDNCTVFHALKRAQTPSIILAMGEIGQPTRILAPKFRSYLSFAAVGEGAGSAPGQISARSLKQMYRFHDIKPSTPAYGVIGNPISHSMSPALHNAAMAKNGLNGVFVACKVEADYPEFIRGM 335          
BLAST of Ggra9701.t1 vs. uniprot
Match: R7QS49 (Shikimate dehydrogenase (NADP(+)) n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QS49_CHOCR)

HSP 1 Score: 135 bits (340), Expect = 2.020e-34
Identity = 67/146 (45.89%), Postives = 97/146 (66.44%), Query Frame = 0
Query:    2 DQILTDMRQVGADVCKIFMAATPALENCVVFKALQKTPRASVILAIGKAGQPSRILAPKYGSYLTFASVGAESESAPGQIHASSLHQIYRFHEIKPGTPVYGVIDNPISQSMSPALHTVAMTASDIKGVFLAFKVKDHYPEFIRNI 147
            +++   M++ GADV KI M AT A+ N +VF  L      +++LA+G+ GQ SR+ AP++G++LTFASV A  ESA GQ+ A +L+Q+YRF  I   TP+YGVI NP+S S SPA+H  A++ +  +GV+   KV    P FIR +
Sbjct:  213 EEVQRGMKEAGADVHKIAMMATSAMHNALVFDTLIGAQVPTIMLAMGELGQLSRLAAPRFGAFLTFASVAAGEESALGQVDADTLNQLYRFRSIGVDTPMYGVIGNPVSHSASPAVHNAALSVTGKEGVYFPLKVDAEVPHFIREM 358          
BLAST of Ggra9701.t1 vs. uniprot
Match: A0A7C4IKE5 (Multifunctional fusion protein n=1 Tax=Phycisphaerae bacterium TaxID=2026778 RepID=A0A7C4IKE5_9BACT)

HSP 1 Score: 109 bits (272), Expect = 4.350e-25
Identity = 57/140 (40.71%), Postives = 84/140 (60.00%), Query Frame = 0
Query:    4 ILTDMRQVGADVCKIFMAATPALENCVVFKALQKTPRASVILAIGKAGQPSRILAPKYGSYLTFASVGAESESAPGQIHASSLHQIYRFHEIKPGTPVYGVIDNPISQSMSPALHTVAMTASDIKGVFLAFKVKDHYPEF 143
            +L +M Q  A V KI   A    +N   F+ L    + ++ L +G+AG  SRILA K+G +LT+AS+  +S +APGQ+  + L ++YR+ +I P T VYGV+  P++ SMSPA+H  A  A D  GV+L   V+  Y  F
Sbjct:  129 LLAEMNQSPAAVSKIVWMARTIRDNLEAFEVLLHRTKPTIALCMGEAGVISRILARKFGGFLTYASLPGDSGTAPGQVSITDLKRLYRWDKIGPETRVYGVVAKPVAHSMSPAVHNAAFDAIDYDGVYLPLLVEPTYESF 268          
BLAST of Ggra9701.t1 vs. uniprot
Match: A0A1G3BJD8 (Multifunctional fusion protein n=1 Tax=Planctomycetes bacterium RIFCSPLOWO2_02_FULL_50_16 TaxID=1801981 RepID=A0A1G3BJD8_9BACT)

HSP 1 Score: 108 bits (271), Expect = 5.120e-25
Identity = 57/135 (42.22%), Postives = 78/135 (57.78%), Query Frame = 0
Query:   12 GADVCKIFMAATPALENCVVFKALQKTPRASVILAIGKAGQPSRILAPKYGSYLTFASVGAESESAPGQIHASSLHQIYRFHEIKPGTPVYGVIDNPISQSMSPALHTVAMTASDIKGVFLAFKVKDHYPEFIRN 146
            GADV KI   A    +N  +F+ L+     ++   +G+ GQ SRILAPKYGS+L+FAS+    ESAPGQ+ A  L  +Y F  I   T +YG+I NP++ S+ P LH        +  V+L FKV+D  P FI  
Sbjct:  138 GADVVKIVAFARNITDNLRIFRLLEYARIPTIAFCMGELGQISRILAPKYGSFLSFASLEKGKESAPGQLSARELLDVYNFPRINRTTDIYGLIGNPVAHSVGPLLHNTCFREERLNAVYLPFKVED-LPSFING 271          
BLAST of Ggra9701.t1 vs. uniprot
Match: A0A2D6TI54 (Multifunctional fusion protein n=1 Tax=Candidatus Woesearchaeota archaeon TaxID=2026803 RepID=A0A2D6TI54_9ARCH)

HSP 1 Score: 108 bits (269), Expect = 8.510e-25
Identity = 56/145 (38.62%), Postives = 85/145 (58.62%), Query Frame = 0
Query:    2 DQILTDMRQVGADVCKIFMAATPALENCVVFKALQKTPRASVILAIGKAGQPSRILAPKYGSYLTFASVGAESESAPGQIHASSLHQIYRFHEIKPGTPVYGVIDNPISQSMSPALHTVAMTASDIKGVFLAFKVKDHYPEFIRN 146
            ++I   +    AD+ KI   A    +N  + + ++K+ +  + L +G  G+ +RIL+  YGS+LTFAS+    ESAPGQI A +L  IYR +EIKPG  +YGVI NPIS+S    +H        +  ++L F+V D   EF++N
Sbjct:  121 NEIFDKLNSTNADIIKIVTTANKLADNLKIIELIKKSEKPIIGLCMGPLGEITRILSTIYGSFLTFASLDKGKESAPGQIPAETLRNIYRINEIKPGFKLYGVIGNPISKSKGYIVHNSLFKKEKLNNIYLKFEVND-LEEFMKN 264          
BLAST of Ggra9701.t1 vs. uniprot
Match: A0A7C3ITH6 (Multifunctional fusion protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A7C3ITH6_9BACT)

HSP 1 Score: 108 bits (269), Expect = 9.270e-25
Identity = 55/141 (39.01%), Postives = 84/141 (59.57%), Query Frame = 0
Query:    4 ILTDMRQVGADVCKIFMAATPALENCVVFKALQKTPRASVILAIGKAGQPSRILAPKYGSYLTFASVGAESESAPGQIHASSLHQIYRFHEIKPGTPVYGVIDNPISQSMSPALHTVAMTASDIKGVFLAFKVKDHYPEFI 144
            I + +    AD+ KI   A    +N  +F+ L+   + ++ + +G+ G  SR+L PK+G++L FAS+GA  E+APGQ+  + L  +Y F  I P T VYGVI NP++ SMSPA+H  A     +  V+L F+V D   +FI
Sbjct:  125 IASRIEHTDADIVKIATHARSLRDNLAIFRLLRAARKPTIAVTMGEHGHVSRVLGPKFGAFLVFASLGAGREAAPGQVPVADLLGLYGFRRIGPATRVYGVIANPVAHSMSPAIHNAAFQHRGLDAVYLPFRV-DSPADFI 264          
BLAST of Ggra9701.t1 vs. uniprot
Match: A0A5J4XG48 (Shikimate dehydrogenase (NADP(+)) n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4XG48_9CHLO)

HSP 1 Score: 108 bits (269), Expect = 1.500e-24
Identity = 57/146 (39.04%), Postives = 83/146 (56.85%), Query Frame = 0
Query:    1 MDQILTDMRQVGADVCKIFMAATPALENCVVFKALQKTPRASVILAIGKAGQPSRILAPKYGSYLTFASVGAESESAPGQIHASSLHQIYRFHEIKPGTPVYGVIDNPISQSMSPALHTVAMTASDIKGVFLAFKVKDHYPEFIRN 146
            ++  L  M   GAD+ KI   AT  ++   V   L+ +    + L +G+ GQP+R+LA KYG YLTF ++G   ESAPGQ     L  +YR  ++ P   ++GVI NP+S S SP LH  AM A+ I  V+L   V D+  +F++ 
Sbjct:  207 LESTLQQMWASGADIAKIATTATDIVDCARVLTLLKTSQGPCIALCMGERGQPTRMLAAKYGGYLTFGALGGGKESAPGQPTLHQLRHMYRLPDLTPDCQIFGVIGNPVSHSRSPQLHNAAMAAAGIDAVYLPLLV-DNLKKFLKT 351          
BLAST of Ggra9701.t1 vs. uniprot
Match: A0A7S0BFR6 (Shikimate dehydrogenase (NADP(+)) (Fragment) n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0BFR6_9RHOD)

HSP 1 Score: 107 bits (266), Expect = 1.860e-24
Identity = 56/138 (40.58%), Postives = 79/138 (57.25%), Query Frame = 0
Query:    1 MDQILTDMRQVGADVCKIFMAATPALENCVVFKALQKTPRASVILAIGKAGQPSRILAPKYGSYLTFASVGAESESAPGQIHASSLHQIYRFHEIKPGTPVYGVIDNPISQSMSPALHTVAMTASDIKGVFLAFKVKD 138
            + QI   M + GAD+CKI + A    +   V   LQ     +++L++ + G  +R+LA KYGS LTF S  +  ESAPGQI  + L  +YRF  I+  T VYG+I NP+S SMSPA+H  A     +  V++   V D
Sbjct:  161 LSQIYARMLEKGADLCKIAVTANDIADCARVLHVLQAATNPTIMLSMTERGMLTRLLAGKYGSMLTFCSTTSGRESAPGQIAVAELRSLYRFKSIESLTKVYGIIGNPVSHSMSPAIHNAAFKHRQVDAVYIPLLVDD 298          
BLAST of Ggra9701.t1 vs. uniprot
Match: A0A7C3TQA1 (Multifunctional fusion protein n=1 Tax=Phycisphaerae bacterium TaxID=2026778 RepID=A0A7C3TQA1_9BACT)

HSP 1 Score: 106 bits (264), Expect = 5.290e-24
Identity = 51/140 (36.43%), Postives = 82/140 (58.57%), Query Frame = 0
Query:    4 ILTDMRQVGADVCKIFMAATPALENCVVFKALQKTPRASVILAIGKAGQPSRILAPKYGSYLTFASVGAESESAPGQIHASSLHQIYRFHEIKPGTPVYGVIDNPISQSMSPALHTVAMTASDIKGVFLAFKVKDHYPEF 143
            IL DM   G  V K+   A    +N   F+ L++  R ++ L +G+AG  SR+LA K+G++LT+A+      +APGQI  S + ++YR+  ++P T V+GV+  P+  SMSPA+H  A  A+   G+++   V+  Y  F
Sbjct:  127 ILLDMENAGGSVHKVAWMARSVRDNIEAFEILRQRRRPTIALCMGEAGVISRVLARKFGAFLTYAATDESGGTAPGQISLSEIKRLYRWDAVRPDTRVFGVVACPVGHSMSPAIHNAAFDAAGFNGIYVPLLVEPGYESF 266          
BLAST of Ggra9701.t1 vs. uniprot
Match: A0A286TXN3 (Multifunctional fusion protein n=1 Tax=Candidatus Scalindua japonica TaxID=1284222 RepID=A0A286TXN3_9BACT)

HSP 1 Score: 105 bits (262), Expect = 8.760e-24
Identity = 52/138 (37.68%), Postives = 81/138 (58.70%), Query Frame = 0
Query:    1 MDQILTDMRQVGADVCKIFMAATPALENCVVFKALQKTPRASVILAIGKAGQPSRILAPKYGSYLTFASVGAESESAPGQIHASSLHQIYRFHEIKPGTPVYGVIDNPISQSMSPALHTVAMTASDIKGVFLAFKVKD 138
            + +I +D+ Q   D+ KI   A    +N  +F+ LQ     ++ L +G+ G  SRIL  K+G +LTFAS+    ESAPGQ+  + LH++Y F +I   T +YG+I NPIS SMSPA+H  A     +   ++  K+++
Sbjct:  123 LSKIYSDICQHKPDIVKIVTYANDITDNIRIFELLQSAKVPTISLCMGELGYISRILTGKFGGFLTFASLERGKESAPGQLTVNELHKVYHFKDINNETKLYGIIGNPISHSMSPAIHNAAFIEKGLNNAYVPLKIEN 260          
The following BLAST results are available for this feature:
BLAST of Ggra9701.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J0I45.980e-5463.01Shikimate dehydrogenase (NADP(+)) n=1 Tax=Gracilar... [more]
R7QS492.020e-3445.89Shikimate dehydrogenase (NADP(+)) n=1 Tax=Chondrus... [more]
A0A7C4IKE54.350e-2540.71Multifunctional fusion protein n=1 Tax=Phycisphaer... [more]
A0A1G3BJD85.120e-2542.22Multifunctional fusion protein n=1 Tax=Planctomyce... [more]
A0A2D6TI548.510e-2538.62Multifunctional fusion protein n=1 Tax=Candidatus ... [more]
A0A7C3ITH69.270e-2539.01Multifunctional fusion protein n=1 Tax=Planctomyce... [more]
A0A5J4XG481.500e-2439.04Shikimate dehydrogenase (NADP(+)) n=1 Tax=Trebouxi... [more]
A0A7S0BFR61.860e-2440.58Shikimate dehydrogenase (NADP(+)) (Fragment) n=1 T... [more]
A0A7C3TQA15.290e-2436.43Multifunctional fusion protein n=1 Tax=Phycisphaer... [more]
A0A286TXN38.760e-2437.68Multifunctional fusion protein n=1 Tax=Candidatus ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR0013813-dehydroquinate dehydratase type IPFAMPF01487DHquinase_Icoord: 2..90
e-value: 2.9E-20
score: 73.5
NoneNo IPR availableGENE3D3.40.50.10860Leucine Dehydrogenase, chain A, domain 1coord: 95..147
e-value: 2.8E-8
score: 35.4
NoneNo IPR availableSUPERFAMILY53223Aminoacid dehydrogenase-like, N-terminal domaincoord: 92..143
NoneNo IPR availableSUPERFAMILY51569Aldolasecoord: 2..93
IPR013785Aldolase-type TIM barrelGENE3D3.20.20.70Aldolase class Icoord: 1..94
e-value: 1.4E-23
score: 85.8
IPR013708Shikimate dehydrogenase substrate binding, N-terminalPFAMPF08501Shikimate_dh_Ncoord: 104..146
e-value: 4.2E-5
score: 23.7
IPR022893Shikimate dehydrogenase familyPANTHERPTHR21089SHIKIMATE DEHYDROGENASEcoord: 4..146

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000084_piloncontigtig00000084_pilon:437751..438194 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra9701.t1Ggra9701.t1Gracilaria gracilis GNS1m malemRNAtig00000084_pilon 437751..438194 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra9701.t1 ID=Ggra9701.t1|Name=Ggra9701.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=148bp
MDQILTDMRQVGADVCKIFMAATPALENCVVFKALQKTPRASVILAIGKA
GQPSRILAPKYGSYLTFASVGAESESAPGQIHASSLHQIYRFHEIKPGTP
VYGVIDNPISQSMSPALHTVAMTASDIKGVFLAFKVKDHYPEFIRNI*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001381DHquinase_I
IPR013785Aldolase_TIM
IPR013708Shikimate_DH-bd_N
IPR022893Shikimate_DH_fam