Ggra9700.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra9700.t1
Unique NameGgra9700.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length394
Homology
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BLAST of Ggra9700.t1 vs. uniprot
Match: A0A2V3J397 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J397_9FLOR)

HSP 1 Score: 309 bits (791), Expect = 1.690e-97
Identity = 173/389 (44.47%), Postives = 233/389 (59.90%), Query Frame = 0 
Query:    3 DISGLVLHVLTAVPTLRALQLTDDGSISSEIGKALDSSSICTLHVLKSRSNCANAFSHQEERVFMASFRGSSTDLLSEAFLDVKDIKMCGTNTVTIKLRDSSRVGVTNLLIKPHKESPDFHLFPIFRAMLGEWLGSDCDEVVDSSSLVMHRTRIPQPQLNLEIQAPIARDLQYFLHPPNYLQRFNSAAGVLTLDLSSLTEVNNFLSADQRTKTRARYHTRALSTLSHILACLLLWNGESFCKLCKCLLALLSSRNSVHTSEVSQNFVAFAIARTVPRLLKKLKNFNMAFLRHPTINDHSETPSSSIVSDHLFLEDLPTFIDHLEQYCEHLETISMGLCFPQYPFERGRDLRPGIITTLNRLLQYRKSSLKVDIDGLRRQPLRWLERVDL 391
            +++ LV  VL++ P LRA  LTDDG +S  +  AL  S I TLH+L+ R +C  A + +E RVFM++FR  ST    E +              T++  D+ R   T+L++KP K +    +FP+ R ML   L    D V   S+LV+HR + PQ +L++ +Q    R +QYFL PPN   RF+ A GVL LDLSSL+++  FL+ADQRTKTRARY  RA STL HI + L L N  +F +LC+  L L S  N +HT EVS+ FVAFA    VPRLL +L+   M  LR+P      + PS S V D LFL+ LP FIDHL++YCE  ETI+M  CFP+   +R + LR  I   L+R+ +Y      VD DGLRR  L W+ R++L
Sbjct:  133 EMNDLVSLVLSSAPCLRAFHLTDDGRLSFAVSLALADSPIRTLHILEPREDCILALADEERRVFMSTFREVSTCFFREVYHHF-------IRQRTVQTHDACRGAGTHLILKPSKNAGRSRIFPVIREMLESRLADSTDSVTHVSALVLHRLQKPQKELSVALQTSSVRPVQYFLSPPNDTHRFSRAVGVLRLDLSSLSDIEQFLTADQRTKTRARYRIRATSTLCHIRSNLSLGNVSNFRRLCRFFLTLFSCSNQIHTLEVSREFVAFAHLPIVPRLLLRLRRLKMICLRNPVTQIADKHPSPSTVCDDLFLDRLPLFIDHLQRYCESFETITMESCFPRLNADRTQGLRRSIENALDRIARYENQRKNVDGDGLRRSLLAWIARIEL 514
The following BLAST results are available for this feature:
BLAST of Ggra9700.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3J3971.690e-9744.47Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..20
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 21..393
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..15
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 16..20

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000084_piloncontigtig00000084_pilon:435270..436451 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra9700.t1Ggra9700.t1Gracilaria gracilis GNS1m malemRNAtig00000084_pilon 435270..436451 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra9700.t1 ID=Ggra9700.t1|Name=Ggra9700.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=394bp
MSDISGLVLHVLTAVPTLRALQLTDDGSISSEIGKALDSSSICTLHVLKS
RSNCANAFSHQEERVFMASFRGSSTDLLSEAFLDVKDIKMCGTNTVTIKL
RDSSRVGVTNLLIKPHKESPDFHLFPIFRAMLGEWLGSDCDEVVDSSSLV
MHRTRIPQPQLNLEIQAPIARDLQYFLHPPNYLQRFNSAAGVLTLDLSSL
TEVNNFLSADQRTKTRARYHTRALSTLSHILACLLLWNGESFCKLCKCLL
ALLSSRNSVHTSEVSQNFVAFAIARTVPRLLKKLKNFNMAFLRHPTINDH
SETPSSSIVSDHLFLEDLPTFIDHLEQYCEHLETISMGLCFPQYPFERGR
DLRPGIITTLNRLLQYRKSSLKVDIDGLRRQPLRWLERVDLDH*
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