Ggra9687.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra9687.t1
Unique NameGgra9687.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length149
Homology
BLAST of Ggra9687.t1 vs. uniprot
Match: A0A2V3IYV5 (Mannose-P-dolichol utilization defect 1 protein homolog n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IYV5_9FLOR)

HSP 1 Score: 104 bits (259), Expect = 1.470e-24
Identity = 55/98 (56.12%), Postives = 70/98 (71.43%), Query Frame = 0
Query:   51 HRCRVLIDREMQPVCACPSSPRLLPSLLLSETAHLCLSLSQAIGFAVMNFAGLITVPQIATIMSKQSVAGVTLTTFLFETLSYTYDLAAHFCQSYPFS 148
            H   VLIDR + P+C  P+SP   P +LLS +A    SLS A+GF ++ FAGLI +PQIATI+S +SVAG+ LTTFL ET  Y+Y+LAAH+ Q YP S
Sbjct:   16 HSANVLIDRVLPPICTRPTSPLEFPLMLLSNSACFRASLSLALGFGIVLFAGLIKLPQIATIVSNKSVAGLALTTFLIETFGYSYNLAAHYRQRYPIS 113          
BLAST of Ggra9687.t1 vs. uniprot
Match: R7QG09 (Mannose-P-dolichol utilization defect 1 protein homolog n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QG09_CHOCR)

HSP 1 Score: 95.9 bits (237), Expect = 2.300e-21
Identity = 52/93 (55.91%), Postives = 68/93 (73.12%), Query Frame = 0
Query:   56 LIDREMQPVCACPSSPRLLPSLLLSETAHLCLSLSQAIGFAVMNFAGLITVPQIATIMSKQSVAGVTLTTFLFETLSYTYDLAAHFCQSYPFS 148
            L+DR + PVC  P S   LPS++LSE+     SLS A+G  ++ FAGLI +PQIATI+S +SVAG++ TTFL ET  YTY+LAAH+ Q+YP S
Sbjct:   15 LVDRVLPPVCDRPESLLQLPSIILSESDCFRASLSLALGLGIVFFAGLIKLPQIATIVSNKSVAGLSGTTFLIETFGYTYNLAAHYRQNYPIS 107          
BLAST of Ggra9687.t1 vs. uniprot
Match: A0A1X6PCQ9 (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6PCQ9_PORUM)

HSP 1 Score: 66.2 bits (160), Expect = 4.010e-10
Identity = 39/93 (41.94%), Postives = 59/93 (63.44%), Query Frame = 0
Query:   56 LIDREMQPVCACPSSPRLLPSL--LLSETAHLCLSLSQAIGFAVMNFAGLITVPQIATIMSKQSVAGVTLTTFLFETLSYTYDLAAHFCQSYP 146
            + D+ + P  ACP+   L+P +  LL +      +LS+ +G  ++  AGLI +PQIA+I+S +S  G++ TTFL ET  +TY+LAAH  Q YP
Sbjct:   41 VFDKLLPP--ACPTYTGLVPLITTLLQDRTCFRAALSKGLGLGIVAAAGLIKLPQIASIVSSRSAEGLSKTTFLVETFGHTYNLAAHVRQGYP 131          
The following BLAST results are available for this feature:
BLAST of Ggra9687.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A2V3IYV51.470e-2456.12Mannose-P-dolichol utilization defect 1 protein ho... [more]
R7QG092.300e-2155.91Mannose-P-dolichol utilization defect 1 protein ho... [more]
A0A1X6PCQ94.010e-1041.94Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..17
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..33

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000084_piloncontigtig00000084_pilon:175709..176155 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra9687.t1Ggra9687.t1Gracilaria gracilis GNS1m malemRNAtig00000084_pilon 175709..176155 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra9687.t1 ID=Ggra9687.t1|Name=Ggra9687.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=149bp
MRAAQATHTSARAAAAQSPRRNATPLKLDPPPSTLNKRVALRPNGVCNRH
HRCRVLIDREMQPVCACPSSPRLLPSLLLSETAHLCLSLSQAIGFAVMNF
AGLITVPQIATIMSKQSVAGVTLTTFLFETLSYTYDLAAHFCQSYPFS*
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