Ggra9682.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra9682.t1
Unique NameGgra9682.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length153
Homology
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BLAST of Ggra9682.t1 vs. uniprot
Match: A0A2V3IN75 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IN75_9FLOR)

HSP 1 Score: 99.0 bits (245), Expect = 1.260e-23
Identity = 51/120 (42.50%), Postives = 75/120 (62.50%), Query Frame = 0 
Query:   30 KDMYLSFSDDELWAAARGRSRVGSCYIP-SAGPPAYCDLYVKSGVRGADGDYGWPKNRSNRGTGCVKAPEFPRRRSHCFFTSADY-SAAGAELGSFCTNSGKANALAQLRHAIRNNACDL 147
            K  YLS S + L+A    +  VG+CYI  + G  +YCDLYV +   G +G  GWP+  ++ GTGCVKAPEFPR+R++C+++ ++Y +   A   +FCT+    NA  QLR A+  + C L
Sbjct:   27 KSFYLSLSPEALFAYGV-KGAVGACYISLNTGSSSYCDLYVNTATIGNNGHRGWPRKLNDMGTGCVKAPEFPRKRTYCWYSRSEYINHPQAIRDTFCTHPSVTNAANQLRDAVEKDQCAL 145
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BLAST of Ggra9682.t1 vs. uniprot
Match: A0A1X6P9W0 (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P9W0_PORUM)

HSP 1 Score: 77.4 bits (189), Expect = 3.080e-15
Identity = 41/111 (36.94%), Postives = 56/111 (50.45%), Query Frame = 0 
Query:   35 SFSDDELWAAARGRSRVGSCYIPSAGPPAYCDLYVKSGVRGADGDYGWPKNRSNRGTGCVKAPEFPRRRSHCFFTSADYSAAGAELGSFCTNSGKANALAQLRHAIRNNAC 145
            S  D +L+    G   +G C I + G    C LY KS ++G+DGD GWPK  +NRGTGC            C+F  A+Y    + +   CT     N +A +RHA+R  AC
Sbjct:   36 SRGDADLFFHLTGGRTIGGCRIQTGG--GACTLYAKSTIKGSDGDKGWPKTVTNRGTGCALGG------GSCYFDDANYQLKASVVEDLCTRDAFHNVVAAVRHAMRAGAC 138
The following BLAST results are available for this feature:
BLAST of Ggra9682.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3IN751.260e-2342.50Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A1X6P9W03.080e-1536.94Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 7..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..26
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 19..26
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 27..152
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..6
NoneNo IPR availableTMHMMTMhelixcoord: 7..29

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000248_piloncontigtig00000248_pilon:66569..67027 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra9682.t1Ggra9682.t1Gracilaria gracilis GNS1m malemRNAtig00000248_pilon 66569..67027 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra9682.t1 ID=Ggra9682.t1|Name=Ggra9682.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=153bp
MNSLFRFVLSAGIFIIVLSAPSGAQAFCFKDMYLSFSDDELWAAARGRSR
VGSCYIPSAGPPAYCDLYVKSGVRGADGDYGWPKNRSNRGTGCVKAPEFP
RRRSHCFFTSADYSAAGAELGSFCTNSGKANALAQLRHAIRNNACDLPTC
RE*
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