Ggra9677.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Ggra9677.t1
Unique Name	Ggra9677.t1
Type	polypeptide
Organism	Gracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length	249

Homology

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BLAST of Ggra9677.t1 vs. uniprot
Match: A0A2V3IFL1 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IFL1_9FLOR)

HSP 1 Score: 352 bits (903), Expect = 1.610e-120
Identity = 168/227 (74.01%), Postives = 188/227 (82.82%), Query Frame = 0

Query:   21 PSHARRTCAIATHRVTGKNSLFSLICRCDNLPEMIGRSIRFLDPHTPDTIAQEQLTVDCIEHLKPRMARACVHSGAAFERSAAHVLRNCMDKRPQNPSAEGLQPFTFKKDRCETEFRELDVERMEALLVCACTQRAGYLVHPGVIQFITNDSPVGSGAEQRLLQECTEEALPSLNDACRNIPERFDLRGAQAFNVCCKRARVLFDDEKLKCQAIVPDVVESIDLTFV 247
            P+H  RTC IATHRVTGKN+LFSLICRC +  EM+GRSIRFLDPHTPDTIAQE+LTV CIEH KP MA AC+ SG+ FER AAHVLR CMD+RP+NPSAE   PFTF++D CE+EFRELDV+R+EALLVCACTQR GY+VHPGVIQFIT  SP G+  EQ+LL  CT EALP L D C N+PERFDLR AQAFNVCCKR RVLF  +KLKCQA VPD V  +DLTFV
Sbjct:   20 PAHGERTCRIATHRVTGKNNLFSLICRCGDGLEMLGRSIRFLDPHTPDTIAQEELTVQCIEHRKPEMAGACLKSGSEFERLAAHVLRECMDRRPENPSAEERMPFTFRRDMCESEFRELDVDRVEALLVCACTQRPGYIVHPGVIQFITTGSPNGASEEQKLLLNCTREALPRLTDTCSNMPERFDLRSAQAFNVCCKRVRVLFALDKLKCQATVPDDVTELDLTFV 246

[Close]

BLAST of Ggra9677.t1 vs. uniprot
Match: A0A2V3IF75 (Uncharacterized protein n=2 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IF75_9FLOR)

HSP 1 Score: 228 bits (581), Expect = 7.970e-73
Identity = 105/161 (65.22%), Postives = 127/161 (78.88%), Query Frame = 0

Query:   87 MARACVHSGAAFERSAAHVLRNCMDKRPQNPSAEGLQPFTFKKDRCETEFRELDVERMEALLVCACTQRAGYLVHPGVIQFITNDSPVGSGAEQRLLQECTEEALPSLNDACRNIPERFDLRGAQAFNVCCKRARVLFDDEKLKCQAIVPDVVESIDLTFV 247
            MARAC  +G+ FE  AA VL  CMD+RP NPSAEG  PFTF++D C+ +FRELD +R+E LL C C QR GY+V+PGVIQFIT+ SP G+  EQ++LQECT EA+P L++ CR +PERFDLR AQAFNVCCKRARV FD EKLKCQA VPD +  +DL+FV
Sbjct:    1 MARACFRNGSEFEELAASVLHECMDRRPVNPSAEGRMPFTFRRDSCKADFRELDADRLEVLLACGCVQRPGYIVNPGVIQFITSGSPNGANEEQKMLQECTREAVPQLSETCRVMPERFDLRSAQAFNVCCKRARVQFDVEKLKCQATVPDDITQLDLSFV 161

The following BLAST results are available for this feature:

BLAST of Ggra9677.t1 vs. uniprot

BLAST of Ggra9677.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A2V3IFL1	1.610e-120	74.01	Uncharacterized protein n=1 Tax=Gracilariopsis cho...	[more]
A0A2V3IF75	7.970e-73	65.22	Uncharacterized protein n=2 Tax=Gracilariopsis cho...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..5
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 6..16
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 25..248
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..24
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 17..24

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
tig00000107_pilon	contig	tig00000107_pilon:187286..188032 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria gracilis GNS1m male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Ggra9677.t1	Ggra9677.t1	Gracilaria gracilis GNS1m male	mRNA	tig00000107_pilon 187286..188032 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Ggra9677.t1 ID=Ggra9677.t1|Name=Ggra9677.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=249bp
MALHNVVAALLLAAIASVVHPSHARRTCAIATHRVTGKNSLFSLICRCDN
LPEMIGRSIRFLDPHTPDTIAQEQLTVDCIEHLKPRMARACVHSGAAFER
SAAHVLRNCMDKRPQNPSAEGLQPFTFKKDRCETEFRELDVERMEALLVC
ACTQRAGYLVHPGVIQFITNDSPVGSGAEQRLLQECTEEALPSLNDACRN
IPERFDLRGAQAFNVCCKRARVLFDDEKLKCQAIVPDVVESIDLTFVE*