Ggra9670.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra9670.t1
Unique NameGgra9670.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length561
Homology
BLAST of Ggra9670.t1 vs. uniprot
Match: A0A2V3IS81 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IS81_9FLOR)

HSP 1 Score: 466 bits (1198), Expect = 7.220e-157
Identity = 247/473 (52.22%), Postives = 321/473 (67.86%), Query Frame = 0
Query:   80 MFQNGTIVPSGKQFPLLTWRTPWSTLDTILIALFTTFLSYQTAAILSDLLLGFKRRGQTSPSQMHSLLLGNEGNMLSSLAALLRLNFVDRFRLRPRAIVPSSTQIERNPSSIRLVVAVRLILLLSIPPLINILSIVVALERDEILTVSDAKFGGIAIGILNETEIQGKRGLDSRICEQIPTSVQEDEEEVLMDFSICSGFILTMPSYIGNNEYEEVLRDEVQEGTRVTAVDWPPGSISIYFKQGVREHIYRIWIDVRHDDDILRPKAKWSVDDARSLAQKAADSLILQCTLFLGQKPDILDGMKHKRQENGIIRAWTTVGCQAPTQMVMFSAVLFASEAGTVETERFIVGKVDPEDGDEGRVEEFFEGGSLKFIRRRQSLGPLGILVVVSVIALLLRFVVKLVINADIDDAIDVVFRNVLGLRSSGSGTLLGSRDTFRIDHKYKWGEKMYVGLKVDEDEENDEWNGGLLSSAP 552
            M +NGTIV S +Q PL TW TPW  ++TI IA+ TT LSYQ  A  SDLLLG K +G+TS SQ+HS LL NE +M+  LAALLRL+ +DR RLR RA VPS   IER+ SS+R     RL+LLL+IPPL+N+LSIVVALERD  LTVS + F G+++G+L        RGL +  C Q+ TS  E+EE  LMDFS+CSGF  +  SY+G + +E  L  EV  GT +TAV+ P GSI++ FK GV E  Y +W+DV H+D I R K +WSVDDAR + Q+A+D+L+L C +  GQKP++   MKH+    G+IRAW+ VGC+  T  ++ S  +FA   G V TE F VG+V+  DG +G V EFF G SL  IRRR+SL PL +L + +V A+++R  VK+  NADIDDAID V R  L L S  + TLLG ++TFR DHKY+WGE  Y+GL +D +EE   +  G+L  AP
Sbjct:    1 MIENGTIVYSAEQLPLFTWSTPWPAVNTITIAILTTVLSYQITAAFSDLLLGLKPKGKTSASQIHSQLLSNEKSMVHVLAALLRLDTLDRIRLRHRAKVPSFMAIERHSSSVRFKTIARLVLLLAIPPLMNVLSIVVALERDTFLTVSASNFQGVSVGVLRTPVTDQVRGLGTLACHQVMTSFSENEES-LMDFSMCSGFRSSEHSYVGPDTFETALEGEVHGGTLITAVNLPRGSITVSFKHGVAERAYTMWLDVSHEDGIFRTKPRWSVDDAREVVQRASDALVLSCAIEAGQKPEVEGEMKHEIGARGVIRAWSKVGCEGSTNAIILSTTVFAGIIGLVNTEGFWVGEVNAIDGVDGEVAEFFNGESLSLIRRRRSLAPLAVLALSTVAAIVVRLTVKVFANADIDDAIDTVVRRGLRLNSKKNQTLLGVKETFRFDHKYQWGENAYLGLHIDNEEEVGGFCSGILDIAP 472          
BLAST of Ggra9670.t1 vs. uniprot
Match: R7Q4I8 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q4I8_CHOCR)

HSP 1 Score: 101 bits (251), Expect = 2.760e-19
Identity = 109/445 (24.49%), Postives = 193/445 (43.37%), Query Frame = 0
Query:   80 MFQNGTIVPSGKQFPLLTWRTPWSTLDTILIALFTTFLSYQTAAILSDLLLGFKRRGQTSPSQMHSLLLGNEGNMLSSLAALLRLNFVDRFRLR------PRAIVPSSTQIERNPSSIRLVVAVRLILLLSIPPLINILSIVVALERDEILTVSDAKFGGIAIGILNETEIQGKRGLDSRICEQIPTSVQEDEEEVLMDFSICSGFILTMPSYIGNNEYEEVLRDEVQEGTRVTAVDWPPGSISIYF---KQGVREHIYRIWIDVRHDDDILRPKAKWSVDDARSLAQKAADSLILQCTLFLGQKPDILDGMKHKRQENGIIRAWTTVGCQAPTQMVMFSAVLFASEAGTVETERFIVGKVDPEDGDEGRVEEFFEGGSLKFIRRRQSLGPLGILVVVSVIALLLRFVVKLVINADIDDAIDVVFRNVLGLRSSGSGTLLGSRDT 515
            M  NGT+          TW +    L    +A+ TT LSYQ  A + DL +G K  G  S   ++  LL +E + L+  AALLR   + R+         P A+    T+  + PS     +A +L++LL + P+ N+++IV++LERD ++T  +AKFGG+A G+  +     +  L   +C +    V   E   L  F  C+    T      +      ++ EV    ++       GS +  F   +  ++E +Y+I   V  DD  L+       D  +   + A    +    +   ++  ++   + K  E G+     +      T+ +             VE+E   V +V  ED + G V  +F G  L ++ R ++   + +L +++      R VVK+V N D+  A++++ + +       S  +L S DT
Sbjct:    1 MIANGTLTHPFAAQTFWTWESSSPVLHAFTVAILTTILSYQLTAAIFDLCVGLKPAGWVSIRNLYVQLLADEASPLAIAAALLRNPTLARWHFHGFRAECPNALAVQDTRPRQIPS-----IAPKLLVLLLVAPVTNLVAIVLSLERDSVVTFEEAKFGGVAFGVSFDNNTDVREELLMPLCTRYAQDVGRGET-ALASFLFCT---YTHHGIRQSPFSRSRVQVEVDRAGQLWMRVLMQGSKTEQFGSAEMAIQERVYKIRTAVTADD--LKSVVGTGQDILKRTCRAATTEAVGDAVVTGTREGGMVVTQQAKCTETGMTAYGASTAVAHMTRRLTL-----------VESEELEVARV--EDVEAGAVR-YFNGRGLSYVSRHETFVSVAVLGLMTAAVTAARLVVKMVTNNDVYAAVEIMVKEMAAWPCCDS--MLPSSDT 418          
The following BLAST results are available for this feature:
BLAST of Ggra9670.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3IS817.220e-15752.22Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7Q4I82.760e-1924.49Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 195..218
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 108..132
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 165..194
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..107
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 219..458
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 480..560
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 144..164
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 133..143
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 459..479
NoneNo IPR availableTMHMMTMhelixcoord: 108..130
NoneNo IPR availableTMHMMTMhelixcoord: 457..479
NoneNo IPR availableTMHMMTMhelixcoord: 194..216
NoneNo IPR availableTMHMMTMhelixcoord: 145..167

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000107_piloncontigtig00000107_pilon:71645..73693 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra9670.t1Ggra9670.t1Gracilaria gracilis GNS1m malemRNAtig00000107_pilon 71645..73693 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra9670.t1 ID=Ggra9670.t1|Name=Ggra9670.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=561bp
MEPQTKLAMLAYTESSKLTDIQVLARRCENSVSEPRSVLYDKQGEQTACG
FPSTNTCCRSFSSVHGRQNRHYFCSKYRQMFQNGTIVPSGKQFPLLTWRT
PWSTLDTILIALFTTFLSYQTAAILSDLLLGFKRRGQTSPSQMHSLLLGN
EGNMLSSLAALLRLNFVDRFRLRPRAIVPSSTQIERNPSSIRLVVAVRLI
LLLSIPPLINILSIVVALERDEILTVSDAKFGGIAIGILNETEIQGKRGL
DSRICEQIPTSVQEDEEEVLMDFSICSGFILTMPSYIGNNEYEEVLRDEV
QEGTRVTAVDWPPGSISIYFKQGVREHIYRIWIDVRHDDDILRPKAKWSV
DDARSLAQKAADSLILQCTLFLGQKPDILDGMKHKRQENGIIRAWTTVGC
QAPTQMVMFSAVLFASEAGTVETERFIVGKVDPEDGDEGRVEEFFEGGSL
KFIRRRQSLGPLGILVVVSVIALLLRFVVKLVINADIDDAIDVVFRNVLG
LRSSGSGTLLGSRDTFRIDHKYKWGEKMYVGLKVDEDEENDEWNGGLLSS
APKAATEFSQ*
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