Ggra9669.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra9669.t1
Unique NameGgra9669.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length567
Homology
BLAST of Ggra9669.t1 vs. uniprot
Match: A0A2V3IG74 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IG74_9FLOR)

HSP 1 Score: 322 bits (824), Expect = 4.800e-99
Identity = 195/554 (35.20%), Postives = 282/554 (50.90%), Query Frame = 0
Query:    8 LLLGTIFACHVSAADHASKLHRARSSPNSTGILRGRALVYTRSLDA----------------SAPLVQ---RVMHFSAHVKKDIILYDKLEDQSVRIAHCSRGLAPRKASIKLSGSKLQPSDFREGAAFIISRHDWKRHCAPMQRVPGIEHNDDVLFFVIDRVHFTDNHTVLHMTIVPGEDVVPHVDFQISNGVAQDIPFPKRIVFDDDPFYETTGSLSPVSRDTEIGIFLP--PRP-FSGRRKVHPAPGLDLDFNISMLVGVHQLSVNRE-RNEVRWDHYLDATMEVELISSVSANVDEKGQILHDRLDNFGHFWYLPLVGRVGFGAFGRVEWIVDADIGAGLTTRFKTTQKFSHKVKVKLDQSRVDIFGR-PPNPFYLRGSAFNFTDVPNSNADFKGFVGMRPTVEIEYQWKGFDFKTDTGANVGLEAEMREKSPPYGPLFDRGLEIGNCNACHKLRGSARMRAKDLVVRFEPKDENPFEHWLVPQPHDIDLGTVCALPDLTCGGFA---------SPCLKCLTGRSCPQHYNCVNGKCMLPRQFGQTCGAC 528
            LL   +   H SA    S+LHR  S   S  +LRGR L+ + SLD                 +A LV    R++ FS  +KK+ ++YD+LE+  V+I  C+R    R+A+IKLSG  L  SDF  G AF+I   DW++HC  +Q V G++  DDVLF++ID V        L M+IVPG +V P VD  +          PK+ +F+D P + TT SL   SR+  +   LP   RP  S + K++   G  L+ + S+   V++  V R  + EV+W+  L A ++ +L  +     +  G+I    +  FG    +P VGR+  GAFG+VEW+ D +IGA L    + + +   +V  ++   R++     P N      S F F D  N+ A   GFVG+RP V +E        + + GA +GLEA+ R K+PP+      GL+IG CN CH+LRG   ++ KDL V+         E  L+ Q   I LGT+CALP  TC             S C  C +   CP   +C++GKC+     GQ CGAC
Sbjct:   10 LLWALLLVSHASA----SRLHRVSSVTGSPTVLRGRTLI-SGSLDGLKANAFSANAFGATPNAASLVASNPRLLEFSVSLKKNSVVYDELEEDGVQITSCTRDAGSRQATIKLSGDNLDSSDFASGTAFVIDVDDWEKHCGQVQPVEGVDEADDVLFYIIDAVSVNGKQVSLSMSIVPGSEVAPEVDIDVKEEPVFVTALPKKFIFNDSPLFATTSSLLSTSRNLVLNDSLPIVTRPTISHKAKINLFTGAVLEVDASLSANVNKFKVKRLFKTEVQWEQSLKARLDAQLTVNAKFKGERSGEIFRRPIPKFGFSVKIPFVGRIRAGAFGKVEWVADVEIGAALEASIRASHETKQRVTARIIPPRLNSKNLLPANAGSSGSSTFKFKDELNAEASIIGFVGVRPAVGVELTLGKKGIEGNIGAKLGLEADTRIKNPPFEAYTGSGLKIGKCNRCHRLRGGLNIKGKDLGVQLVKNGRVDKEKILIGQLFVIRLGTLCALP-ATCPANPPNPRSTPPPSKCRTCSSLVKCPSGMSCISGKCIGFSAPGQACGAC 557          
BLAST of Ggra9669.t1 vs. uniprot
Match: A0A2V3J3K5 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J3K5_9FLOR)

HSP 1 Score: 313 bits (802), Expect = 4.460e-96
Identity = 181/507 (35.70%), Postives = 269/507 (53.06%), Query Frame = 0
Query:   24 ASKLHRARSSPNSTGILRGRALVY-----------TRSLDASAPLVQRVMHFSAHVKKDIILYDKLEDQSVRIAHCSRGLAPRKASIKLSGSKLQPSDFREGAAFIISRHDWKRHCAPMQRVPGIEHNDDVLFFVIDRVHFTDNHTVLHMTIVPGEDVVPHVDFQISNGVAQDIPFPKRIVFDDDPFYETTGSLSPVSRDTEIG--IFLPPRP-FSGRRKVHPAPGLDLDFNISMLVGVHQLSVNRE-RNEVRWDHYLDATMEVELISSVSANVDEKGQILHDRLDNFGHFWYLPLVGRVGFGAFGRVEWIVDADIGAGLTTRFKTTQKFSHKVKVKLDQSRVDIFG-RPPNPFYLRGSAFNFTDVPNSNADFKGFVGMRPTVEIEYQWKGFDFKTDTGANVGLEAEMREKSPPYGPLFDRGLEIGNCNACHKLRGSARMRAKDLVVRFEPKDENPFEHWLVPQPHDIDLGTVCALPDLTCGGFASP--------CLKCLTGRSCPQ 506
            AS+LHR  S+  S  ILRGR L+            T SL  S+P   R++ FS  +K D +++D+L +  ++I  CSR    RKA+ +LSGSKL  SDF  G AF+I   DW++HCA +Q V G++  DD LF++ID V   +    L MTIV G +V P VDF IS   A     P+++VF+D P + TT SL   SR+  +   + +  RP  S + KV    G  L+ + S+   V++  V R  + EV+W+  L+A +  +L      + +  G+I    +  FG    +P VGR+  GAFG+V+W+ D +IGA L    + + +   +V  ++   R D     PPN      S+F F D  N+ A   GFVG+RP V +E        + + GA +GLEA+ R K+PP+      GL+IG C++CH+LRG+  ++ KDL V+         E  LV +   I LGT+CALP       ++P        C +C   + CP+
Sbjct:   22 ASRLHRVSSASGSPTILRGRTLISAAPDGVETTSNTASLVVSSP---RLLEFSVALKTDAVVFDELAEDGIQITSCSRDAVARKATAELSGSKLDASDFAPGTAFVIDVDDWEKHCAEVQPVEGVDEADDALFYMIDTVSVNEKQVSLKMTIVSGSEVAPEVDFNISEEPAFVTALPEKVVFNDSPLFATTTSLLSTSRNLMLNDSLAVVARPTISHKTKVKLFTGAVLEVDASLSANVNKFKVKRLFKTEVQWEQSLNARLNAQLTVDAKLSGERSGEIFRRPIPKFGFSAKIPFVGRIRAGAFGKVDWVADVEIGAALEASIRVSHETKQRVTARIIPPRFDSRNVLPPNAGSSGSSSFKFKDELNAEASIVGFVGVRPAVGVELTLGKKGIEGNIGAKLGLEADTRIKNPPFTAFTGSGLKIGKCSSCHRLRGALNIKGKDLGVQLVKNGRVDKEKILVGELFVIRLGTLCALPATCPAAPSNPRPSPRPSTCRRCTRAKKCPK 525          
BLAST of Ggra9669.t1 vs. uniprot
Match: A0A2V3IUH9 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IUH9_9FLOR)

HSP 1 Score: 283 bits (723), Expect = 1.790e-84
Identity = 162/473 (34.25%), Postives = 247/473 (52.22%), Query Frame = 0
Query:   24 ASKLHRARSSPNSTGILRGRALVY----TRSLDA-----------SAPLVQ---RVMHFSAHVKKDIILYDKLEDQSVRIAHCSRGLAPRKASIKLSGSKLQPSDFREGAAFIISRHDWKRHCAPMQRVPGIEHNDDVLFFVIDRVHFTDNHTVLHMTIVPGEDVVPHVDFQISNGVAQDIPFPKRIVFDDDPFYETTGSLSPVSRDTEIGIFLP--PRP-FSGRRKVHPAPGLDLDFNISMLVGVHQLSVNRE-RNEVRWDHYLDATMEVELISSVSANVDEKGQILHDRLDNFGHFWYLPLVGRVGFGAFGRVEWIVDADIGAGLTTRFKTTQKFSHKVKVKLDQSRVDIFGR-PPNPFYLRGSAFNFTDVPNSNADFKGFVGMRPTVEIEYQWKGFDFKTDTGANVGLEAEMREKSPPYGPLFDRGLEIGNCNACHKLRGSARMRAKDLVVRFEPKDENPFEHWLVPQPH 473
            AS++HR   +  S  +LRGR L+     +  L A           +APL+    R++ FS  +KKD ++YD+LE+ ++RI  C+R  A RKA+++L+G  L  +DF  G AF+I   DW++HC  +Q V G++  DDVLF+VID V        L M IV G +V P VD  IS         P+++VF+D P + +T SL   SR+  I   LP   RP  S + KV+   G  L+ + S+   V++  + R  + EV+W+  L A++  +L        +  G+I    +  FG    +P VGRV  GAFG+++W+ + +IGA L    + + +   +V  ++   R++     P N      S F F D  N+ A   GFVG+RP + +E        + + GA +GLEAE R K PP+ P    GL+IG C+ CH+L+G   +R KDL V+       P       +PH
Sbjct:   18 ASRIHRVSGASGSPTVLRGRTLISGSGGSPKLSAFSANSFAGKPNAAPLLASTPRLLEFSVELKKDSVVYDELEEDNIRITSCTRDAASRKATVQLTGDNLDSADFGTGVAFVIDVDDWEKHCGQVQPVEGVDEADDVLFYVIDAVSVNGKQVSLSMNIVSGSEVAPEVDIDISEEPVFVSALPQKVVFNDSPLFASTSSLLATSRNLMINDSLPYVTRPKISHKSKVNLFKGAVLEVDASLSASVNRFKIKRFFKTEVQWEQSLTASLNAQLTVDAKFKGERGGEIFRRPIPKFGFSAKIPFVGRVRAGAFGKLDWVAEVEIGAALEASIRASHETKQRVTARIIPPRLNSKNLLPANKGSSGSSNFKFKDELNAEASIVGFVGVRPAIGVEVTLGKKGIEGNIGAKLGLEAETRIKHPPFTPYNGGGLKIGKCSRCHRLQGGLNIRGKDLGVQLVKNGRRPVPPRRRRRPH 490          
BLAST of Ggra9669.t1 vs. uniprot
Match: A0A2V3IN87 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IN87_9FLOR)

HSP 1 Score: 214 bits (544), Expect = 1.070e-59
Identity = 136/470 (28.94%), Postives = 212/470 (45.11%), Query Frame = 0
Query:    6 LLLLLGTIFACHVSAADHASKLHRARSSPNSTGILRGRALVY----TRSLDAS-----------APLVQ---RVMHFSAHVKKDIILYDKLEDQSVRIAHCSRGLAPRKASIKLSGSKLQPSDFREGAAFIISRHDWKRHCAPMQRVPGIEHNDDVLFFVIDRVHFTDNHTVLHMTIVPGEDVVPHVDFQISNGVAQDIPFPKRIVFDDDPFYETTGSLSPVSRDTEIGIFLPPRPFSGRRKVHPAPGLDLDFNISMLVGVHQLSVNRE-RNEVRWDHYLDATMEVELISSVSANVDEKGQILHDRLDNFGHFWYLPLVGRVGFGAFGRVEWIVDADIGAGLTTRFKTTQKFSHKVKVKLDQSRVDIFGR-PPNPFYLRGSAFNFTDVPNSNADFKGFVGMRPTVEIEYQWKGFDFKTDTGANVGLEAEMREKSPPYGPLFDRGLEIGNCNACHKLRGSARMRAKDLVVR 455
            L +LL  + A  VSA    S+LHR  ++     +LRG  L+       +L AS           A LV    R++ FS  +KKD +L+D+LE+  V I+ C+R  A  K +++ +G  L   DF  G AF+I   DW++HC  +Q V G++  DD LF+++D V  +     L M+IVPG +V P +D  IS         P++                                           G  L  + S+   +++  + R  + EV+W+  L A +  +L        +  G+I    +  FG    +P VGRV  GAF +++W+ D  IGA L    + + +   +V   +  +R+      PP+    R S   F D  ++ A   GFVG+RP V +E        +   G+ +G EAE R K PP+ P   RGL +G C+ CH+L+G   +R      R
Sbjct:    4 LCVLLLVLLASQVSA----SRLHRVSNASGPPTVLRGHTLISGSTGVPTLSASSFNSFASTPNAASLVHPTPRLLQFSVKLKKDSVLFDELEEDGVSISSCTRDAASLKETVQRTGDNLDYFDFAAGIAFVIDVDDWEKHCGQVQPVDGVDEADDALFYIVDVVSMSGRQAFLSMSIVPGSEVAPEIDIDISEERVLVSALPQKA------------------------------------------GAVLKVDASLSASINRFKIKRALKTEVQWEQSLKARVNAQLTVDAKIKRERSGEIFRRPIPKFGFSKKIPFVGRVRAGAFAKLDWVADVQIGAALQASIRASHETKQRVTAGIASARLRSRNLLPPSKGSSRSSDLKFKDDLSAEASIVGFVGVRPAVGVEVTLGRKGVEGKIGSKLGSEAETRIKHPPFKPYNGRGLNLGKCSQCHRLQGGLNIRGPWCAAR 427          
BLAST of Ggra9669.t1 vs. uniprot
Match: A0A2V3IF41 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IF41_9FLOR)

HSP 1 Score: 137 bits (345), Expect = 2.490e-33
Identity = 88/250 (35.20%), Postives = 130/250 (52.00%), Query Frame = 0
Query:    6 LLLLLGTIFACHVSAADHASKLHRARSSPNSTGILRGRALVY----TRSLDAS-----------APLVQ---RVMHFSAHVKKDIILYDKLEDQSVRIAHCSRGLAPRKASIKLSGSKLQPSDFREGAAFIISRHDWKRHCAPMQRVPGIEHNDDVLFFVIDRVHFTDNHTVLHMTIVPGEDVVPHVDFQISNGVAQDIPFPKRIVFDDDPFYETTGSLSPVSRDTEIGIFLPP--RP-FSGRRKVHPAP 234
            L +LL  + A  VSA    S+LHR  ++     +LRG  L+       +L AS           A LV    R++ FS  +KKD +L+D+LE+  V I+ C+R  A  K +++ +G  L   DF  G AF+I   DW++HC  +Q V G++  DD LF+++D V  +     L M+IVPG +V P +D  IS         P++ VF+D P + +T SL   SR+      LP   RP FS + K+  AP
Sbjct:    4 LCVLLLVLLASQVSA----SRLHRVSNASGPPTVLRGHTLISGSTGVPTLSASSFNSFTSTPNAASLVHPTPRLLQFSVKLKKDSVLFDELEEDGVSISSCTRDAASLKETVQRTGDNLDYFDFAAGIAFVIDVDDWEKHCGQVQPVDGVDEADDALFYIVDVVSMSGRQAFLSMSIVPGSEVAPEIDIDISEERVLVSALPQKAVFNDSPLFASTSSLLATSRNVIPNGSLPSATRPTFSHKSKISRAP 249          
The following BLAST results are available for this feature:
BLAST of Ggra9669.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A2V3IG744.800e-9935.20Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3J3K54.460e-9635.70Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IUH91.790e-8434.25Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IN871.070e-5928.94Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IF412.490e-3335.20Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..15
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 21..566
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 16..20
NoneNo IPR availablePROSITEPS51257PROKAR_LIPOPROTEINcoord: 1..16
score: 5.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000107_piloncontigtig00000107_pilon:62134..63834 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra9669.t1Ggra9669.t1Gracilaria gracilis GNS1m malemRNAtig00000107_pilon 62134..63834 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra9669.t1 ID=Ggra9669.t1|Name=Ggra9669.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=567bp
MKTGALLLLLGTIFACHVSAADHASKLHRARSSPNSTGILRGRALVYTRS
LDASAPLVQRVMHFSAHVKKDIILYDKLEDQSVRIAHCSRGLAPRKASIK
LSGSKLQPSDFREGAAFIISRHDWKRHCAPMQRVPGIEHNDDVLFFVIDR
VHFTDNHTVLHMTIVPGEDVVPHVDFQISNGVAQDIPFPKRIVFDDDPFY
ETTGSLSPVSRDTEIGIFLPPRPFSGRRKVHPAPGLDLDFNISMLVGVHQ
LSVNRERNEVRWDHYLDATMEVELISSVSANVDEKGQILHDRLDNFGHFW
YLPLVGRVGFGAFGRVEWIVDADIGAGLTTRFKTTQKFSHKVKVKLDQSR
VDIFGRPPNPFYLRGSAFNFTDVPNSNADFKGFVGMRPTVEIEYQWKGFD
FKTDTGANVGLEAEMREKSPPYGPLFDRGLEIGNCNACHKLRGSARMRAK
DLVVRFEPKDENPFEHWLVPQPHDIDLGTVCALPDLTCGGFASPCLKCLT
GRSCPQHYNCVNGKCMLPRQFGQTCGACGPCKIGSCLSGVCLLSAIPGAG
NEIPGLAPHSFPVNGL*
back to top