Ggra9667.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra9667.t1
Unique NameGgra9667.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length361
Homology
BLAST of Ggra9667.t1 vs. uniprot
Match: A0A2V3J5A0 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J5A0_9FLOR)

HSP 1 Score: 206 bits (523), Expect = 1.110e-59
Identity = 123/358 (34.36%), Postives = 192/358 (53.63%), Query Frame = 0
Query:    1 MVLIPLKSQYVSLIISFISLIAELALLHAALSFNLYFECRTLRNEHVVRVSRHQRRVRFLSIFALLSFLVLEATASYLSDPARRETFADHKCLAVDGIRRLPRRNGERVEEDFVSMKCNDFRNKSIIYRAGNYSFEDERVRCSPFFIVEYKTDSGSRNLPQLLNGARQPSADDPNPNPFLFCREGFCFIVETVLNGSMESQNNISIQISDMINETEFLEAEKD-VKVMEHRVH--YDFSGLQPILAERAWEAFKQRVFDPVELTRRIYFGAENTVCPFDISLGDATQIPSYLVYLLLIIWLLSFLVGFASLIVRKNVFYDISNPTDWAKHTRHDIDEQIIGDPVISMINDSGRHVVEV 355
            MVLIPLKSQYVSLI + ISL+ EL+LL A L  N Y EC  L+  H V V+RHQ R   L +    +F  +E   S+ SDPA + TF    C+AV+ + R     G  +EE  + + C      +I  R GNYS E  +V C+    + +  +    +LP  +  A   S+++P P+P L C +GFC +++T    S  S   +        +E   L+ +   +K +   +    + + L P  AER  +A+ + + DP EL R ++ G+E   C F  +  +AT++P +++  +  +W++S      +L++ + VFYDISNP  WAK T    DE + GDP +S + ++G HV+ V
Sbjct:    1 MVLIPLKSQYVSLINTIISLLTELSLLKALLRVNNYCECHALQKGHHVSVTRHQNRATCLVLVTTAAFFAIELLLSFYSDPAVKLTFQSQPCVAVETLTRRSGDPGTSLEEIGIVLSCVKTNESNIFLRVGNYSMETRKVECAESATLMFTLEPHV-SLP--IGTAAAVSSENPFPDPLLKCADGFCVVIQTASYQSSSSDTTVWFSDVFFADEVSMLQIDNSPIKFLNTTIFSAQNNTELLPKFAERLLQAYDENLNDPFELRRLMFLGSERDTCQFQRT-SEATEVPPFIIVSVSTVWVISLAAYAMTLLLSRRVFYDISNPVHWAKRTYRRTDEPVHGDPSVSRVLENGHHVMYV 354          
BLAST of Ggra9667.t1 vs. uniprot
Match: A0A2V3IT05 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IT05_9FLOR)

HSP 1 Score: 194 bits (493), Expect = 8.540e-55
Identity = 126/371 (33.96%), Postives = 195/371 (52.56%), Query Frame = 0
Query:    1 MVLIPLKSQYVSLIISFISLIAELALLHAALSFNLYFECRTLRNEHVVRVSRHQRRVRFLSIFALLSFLVLEATASYLSDPARRETFADHKCLAVDGIRRLPRRNGERVEEDFVSMKCNDFRNKSIIYRAGNYSFEDE---RVRCSPFFIVEYKTDSGSRNLPQLLNGARQPSADDPN-------PNPFLFCR---EGFCFIVETVLNGSMESQNNISIQISDMINETE---FLEAEKDVKVMEHRVHYDFSGLQPILAERAWEAFKQRVFDPVELTRRIYFGAENTVCPFDISLGDATQIPSYLVYLLLIIWLLSFLVGFASLIVRKNVFYDISNPTDWAKHTRHDIDEQIIGDPVISMINDSGRHVVEV 355
            MV IPLKSQ+VSLI++ IS +AEL L  A L FN Y EC  LR    V V  H+ R +FL++ A++ F+ LE   S+ SDPA    F   +CLAVD I       G+  +EDF+ ++C   +    + RAGN+S       RVRC    + EY  +    +L   L    +    D +       P P +  +   E  C  V  +   S+   N   + +S  + E+E    +  +  +  +E  V Y+ SGL    A R   A+ + V DP+E+ +R++ G E   C F+    D T +P  LVY ++  W+LSFL   ++L++R+++FYD+S+P  WA+ T   IDE I+G+PV++ + + G  ++ V
Sbjct:    1 MVEIPLKSQFVSLIVTLISGLAELFLFGALLGFNKYSECIALRKGRQVSVRLHRIRAKFLAVLAMVVFIFLEVIMSFFSDPAIEIKFRTDECLAVDRIDLREGFTGDTNDEDFILIRCIGIKKDGFLQRAGNFSLNPNTKARVRCGKHALYEYPNED---DLQFTLTNVTRTGGTDTDLVLECILPTPAVGEKPPTERLCAAVRQLPPNSIGFTN---VYLSAAVRESEVGPLVNQQVVIPFLETSVRYNTSGLSRNFARRLLRAYDKDVTDPMEIRKRVFMGIERRKCAFEHRKKDLTTVPLGLVYGIVAAWILSFLTFASTLLLRRSIFYDMSDPLHWAQRTYRHIDEPIVGNPVVTSVYEHGERLMYV 365          
BLAST of Ggra9667.t1 vs. uniprot
Match: A0A2V3ISI7 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ISI7_9FLOR)

HSP 1 Score: 155 bits (391), Expect = 3.000e-40
Identity = 115/366 (31.42%), Postives = 177/366 (48.36%), Query Frame = 0
Query:    1 MVLIPLKSQYVSLIISFISLIAELALLHAALSFNLYFECRTLRNEHVVRVSRHQRRVRFLSIFALLSFLVLEATASYLSDPARRETFADHKCLAVDGIRRLPRRNGE---RVEEDFVSMKCNDFRNKSIIYRAGNYSFEDERVRCSPFFIVEYKTDSGSRNLPQLLNGARQPSADDPNPNPFLFCREGFCFIVETVLNGSMES-----QNNISIQISDMINETEF---LEAEKDVKVMEHRVHYDFSGLQPILAERAWEAFKQRVFDPVELTRRIYFGAENTVCPFDISLGDATQIPSYLVYLLLIIWLLSFLVGFASLIVRKNVFYDISNPTDWAKHTRHDIDEQIIGDPVISMINDSGRHVVEV 355
            MVLIPLKSQY SLI + +S +AELALL A L +N Y ECR L N   V V  H+ R R L++ A L+F+ LE + S+ SDPA +       C+++D    LP R G     +    V + C       +   AGN S +D  ++C   F               L +     S ++P P+            +E +L+G +        N   +  ++++ +T+    L+    ++V +  V+Y+ +G++  L  R+    +  V D   L R ++ GAE T C FD+    AT I    +Y + + W LS      SL +R  VFYD+S+P DWA+ T  D D   I +PV++   ++G   V V
Sbjct:    1 MVLIPLKSQYTSLIATILSGLAELALLSAVLGYNKYLECRALENGGRVNVRHHRFRTRALTVAATLAFVFLEVSNSFFSDPALKRGEVTKSCISLDA---LPIRRGMLDISLRAAVVGINCLGTNTSLLWQLAGNIS-DDGEIKCGDDF---------------LFSADIHHSPNEPVPDEHT---------MECILDGELNLCAFLYSNGSEVTFTEIVLDTDLSFVLDNNYALRVWKTTVYYNTTGMERELLRRSITLARDLVTDQFVLRREVFAGAEETECNFDVF-SPATTIKEGFLYAIAVAWTLSLAAFLGSLAIRGRVFYDMSDPLDWARQTVRDEDSSDIDNPVVTTRYENGTRFVLV 337          
BLAST of Ggra9667.t1 vs. uniprot
Match: A0A2V3J5C2 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J5C2_9FLOR)

HSP 1 Score: 145 bits (367), Expect = 1.090e-36
Identity = 110/356 (30.90%), Postives = 170/356 (47.75%), Query Frame = 0
Query:    1 MVLIPLKSQYVSLIISFISLIAELALLHAALSFNLYFECRTLRNEHVVRVSRHQRRVRFLSIFALLSFLVLEATASYLSDPARRETFADHKCLAVDGIRRLPRRNGERVEEDFVSMKCNDFRNKSIIYRAGNYSFEDERVRCSPFFIVEYKTDSGSRNLPQLLNGARQPSADDPNPNPFLF-CREGFCFIVETVLNGSMESQNNISIQISDMINETEFLEAEKDVKVMEHRVHYDFSGLQPILAERAWEAFKQRVFDPVELTRRIYFGAENTVCPFDISLGDATQIPSYLVYLLLIIWLLSFLVGFASLIVRKNVFYDISNPTDWAKHTRHDIDEQIIGDPVISMINDSGRHVVEV 355
            MVLIPLKSQY SLI++ IS IAELALL A L FN Y ECR L+N   V V  H+ R + L++ A L+F+ LE  +S+ SDP  +       C ++D +           +   V +KC    +      AGN S +   +        +   +   + +    N  R P  D+P P+ ++  C    C  V    N    +    S  +S ++NE+  L   K        + Y+ +GL+   A RA +   Q V D   L R ++ G+  T C F  +  DAT++    +Y ++I W LS      S  +R+ +FYD+S+P  WA+ T  D D     +PV++ + ++G   + V
Sbjct:    1 MVLIPLKSQYTSLIVTVISGIAELALLSAVLVFNKYLECRALQNGGKVNVRHHRFRTKALTVAATLAFVFLEVFSSFYSDPDDKTELVRKNCTSLDALTVQQGLLNISTQTTVVGVKCIGINSTLFWQHAGNIS-DGRNIGNGGNIGDDEVFECEKKEVLYTANVERAP--DEPVPDEYVVGCVGTSCVFVYRSGNEVTFTDFVHSEDVSRVLNESITLPVWKTT------ISYNVTGLESAFATRAVDLLSQGVTDGFTLRRGVFAGSAITQCNFK-TFSDATRVRKGFIYAIVIAWALSISAFVGSFAIRRRIFYDMSDPLHWAQKTIRDNDLSDTDNPVVTTVYENGSRALLV 346          
BLAST of Ggra9667.t1 vs. uniprot
Match: A0A2V3J6F3 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J6F3_9FLOR)

HSP 1 Score: 114 bits (284), Expect = 3.880e-25
Identity = 96/361 (26.59%), Postives = 162/361 (44.88%), Query Frame = 0
Query:    1 MVLIPLKSQYVSLIISFISLIAELALLHAALSFNLYFECRTLRNEHVVRVSRHQRRVRFLSIFALLSFLVLEATASYLSDPARRETFADHKCLAVDGIRRLPRRNGERVEEDFVSMKCNDFRNKSIIYRAGNYSFEDERVRCSPFFIVEYKTDSGSRNLPQLLNGARQPSADDPNPNPFLFCREG-----FCFIVETVLNGSMESQNNISIQISDMINETEFLEAEKDVKVMEHRVHYDFSGLQPILAERAWEAFKQRVFDPVELTRRIYFGAENTVCPFDISLGDATQIPSYLVYLLLIIWLLSFLVGFASLI-VRKNVFYDISNPTDWAKHTRHDIDEQIIGDPVISMINDSGRHVVEV 355
            MVLI LK+ +VS+I++ +S +AELALL      N   EC+ L+    V+V +H RR R LS+  L +F  LE   S+ +DP        H+C+      +    + + +    + ++C    N +I    GN+S   ++V CS   +  Y    G     +++       AD P       C  G      C  V+   N S+ S      ++S + +    +  E         +H+       + A RA  AF Q +  P  L R IY GA    C F +  G AT +P  ++  L  +W ++ L  FAS+  +R+ VF+ + +P  WA  +    D+ +  +PV++ +    + +V +
Sbjct:    1 MVLIRLKAPFVSVIVTVLSTLAELALLSFLFVLNNLHECKQLQRGRSVQVRQHLRRTRLLSVVCLGAFFALEVVFSFYNDPVNNVQIEIHECITASNSVKDSGDSTQFLRASDILVECRRLDNGTITQFGGNFSSRTQQVECSTEAM--YTHPLGDETSEEIV-------ADVP-----FGCVSGGEEGAACVFVQQRGNLSLISAPFFLDELSILPDTLPHIITE---------LHFTPPSNVSLFATRATNAFLQNIQGPSALRRIIYSGASEDQCAFPVVRGSATTVPLAMIVALAAVWAVA-LAMFASVFALRRGVFFKLDDPMHWATRSVRAADDPLGDNPVLTGLMQDDKTLVHI 337          
The following BLAST results are available for this feature:
BLAST of Ggra9667.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A2V3J5A01.110e-5934.36Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IT058.540e-5533.96Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3ISI73.000e-4031.42Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3J5C21.090e-3630.90Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3J6F33.880e-2526.59Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 57..78
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..11
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 288..310
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 38..56
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 311..360
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 12..37
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 79..287
NoneNo IPR availableTMHMMTMhelixcoord: 15..37
NoneNo IPR availableTMHMMTMhelixcoord: 57..79
NoneNo IPR availableTMHMMTMhelixcoord: 288..310

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000107_piloncontigtig00000107_pilon:19543..20625 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra9667.t1Ggra9667.t1Gracilaria gracilis GNS1m malemRNAtig00000107_pilon 19543..20625 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra9667.t1 ID=Ggra9667.t1|Name=Ggra9667.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=361bp
MVLIPLKSQYVSLIISFISLIAELALLHAALSFNLYFECRTLRNEHVVRV
SRHQRRVRFLSIFALLSFLVLEATASYLSDPARRETFADHKCLAVDGIRR
LPRRNGERVEEDFVSMKCNDFRNKSIIYRAGNYSFEDERVRCSPFFIVEY
KTDSGSRNLPQLLNGARQPSADDPNPNPFLFCREGFCFIVETVLNGSMES
QNNISIQISDMINETEFLEAEKDVKVMEHRVHYDFSGLQPILAERAWEAF
KQRVFDPVELTRRIYFGAENTVCPFDISLGDATQIPSYLVYLLLIIWLLS
FLVGFASLIVRKNVFYDISNPTDWAKHTRHDIDEQIIGDPVISMINDSGR
HVVEVLDLRQ*
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