Ggra9661.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra9661.t1
Unique NameGgra9661.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length216
Homology
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BLAST of Ggra9661.t1 vs. uniprot
Match: A0A2I2FXJ9 (Cysteine proteinase n=1 Tax=Aspergillus steynii IBT 23096 TaxID=1392250 RepID=A0A2I2FXJ9_9EURO)

HSP 1 Score: 62.8 bits (151), Expect = 5.980e-8
Identity = 48/158 (30.38%), Postives = 69/158 (43.67%), Query Frame = 0 
Query:   73 LQVADHSNIFESLESCLRRNTI-MFCEGCERKRNHITEHRFSKAPRTLRIKLNRFEGT--EKNNGFISYPAQLDLRPHTNHGV---QHLCYELKSIVEHQGAAIIGGKFVVLVKNNRNQWFQIEEIGKKEVSIAAVL----------SAKPYLLFYER 214
            L+V D  +I E L  C   +T+   CE CERK  H+   +  + P  L + LNR  G   EK+   +S   Q+ L      G+     +CYEL +I+ H+G  I  G +   VK    +W  I +   + V     L          SA  Y+L Y R
Sbjct:  187 LKVGDAVSIEELLSGCYSGSTVDRDCEHCERKTEHLRTDKVVQVPEVLLVHLNRIGGPGGEKSFNNVSLGDQVVLPESLRRGLADKDDICYELYTIIFHEGDTIESGHYTAAVKAPTGRWMLINDEQVESVQSLKKLMNMGKGKKKHSATAYVLGYRR 344
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BLAST of Ggra9661.t1 vs. uniprot
Match: A0A8E0S3Z3 (Putative ubiquitin carboxyl-terminal hydrolase FAF n=1 Tax=Fasciolopsis buski TaxID=27845 RepID=A0A8E0S3Z3_9TREM)

HSP 1 Score: 56.6 bits (135), Expect = 9.200e-6
Identity = 33/125 (26.40%), Postives = 58/125 (46.40%), Query Frame = 0 
Query:   47 GEMTIRSTCISCQCNSFETKQFTELTLQVADHSNIFESLESCLRRNTI-----MFCEGCERKRNHITEHRFSKAPRTLRIKLNRFE------GTEKNNGFISYPAQLDLRPHTNHGVQHLCYELK 160
            G    +  CI C       + FT L++ + +H+N+F+SLE  ++ + +      +CE C  K   +      + P  L I+L RF+         K N +  +P +LD+ P+T  G++    E K
Sbjct: 2275 GTFADQKLCIDCPHRYSRNESFTILSVDIRNHTNLFQSLEQYVKGDRLEGDNAYWCEACNAKVTTLKRMCIDRLPLVLAIQLKRFDYDWNRDTAIKFNDYFEFPRELDMYPYTVRGLEQHILEAK 2399
The following BLAST results are available for this feature:
BLAST of Ggra9661.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2I2FXJ95.980e-830.38Cysteine proteinase n=1 Tax=Aspergillus steynii IB... [more]
A0A8E0S3Z39.200e-626.40Putative ubiquitin carboxyl-terminal hydrolase FAF... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.90.70.10Cysteine proteinasescoord: 5..215
e-value: 1.8E-35
score: 124.7
NoneNo IPR availablePANTHERPTHR21646UBIQUITIN CARBOXYL-TERMINAL HYDROLASEcoord: 43..214
NoneNo IPR availableCDDcd02257Peptidase_C19coord: 45..213
e-value: 3.83771E-29
score: 107.569
IPR001394Peptidase C19, ubiquitin carboxyl-terminal hydrolasePFAMPF00443UCHcoord: 41..212
e-value: 3.2E-18
score: 66.2
IPR028889Ubiquitin specific protease domainPROSITEPS50235USP_3coord: 1..215
score: 23.995388
IPR038765Papain-like cysteine peptidase superfamilySUPERFAMILY54001Cysteine proteinasescoord: 41..214

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000965_piloncontigtig00000965_pilon:68250..68897 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra9661.t1Ggra9661.t1Gracilaria gracilis GNS1m malemRNAtig00000965_pilon 68250..68897 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra9661.t1 ID=Ggra9661.t1|Name=Ggra9661.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=216bp
MGKIAACIENVIRNMRSNSSCFSFSERSTTEADQISDCGDYDSAFHGEMT
IRSTCISCQCNSFETKQFTELTLQVADHSNIFESLESCLRRNTIMFCEGC
ERKRNHITEHRFSKAPRTLRIKLNRFEGTEKNNGFISYPAQLDLRPHTNH
GVQHLCYELKSIVEHQGAAIIGGKFVVLVKNNRNQWFQIEEIGKKEVSIA
AVLSAKPYLLFYERN*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001394Peptidase_C19_UCH
IPR028889USP_dom
IPR038765Papain-like_cys_pep_sf