Ggra9659.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra9659.t1
Unique NameGgra9659.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length274
Homology
BLAST of Ggra9659.t1 vs. uniprot
Match: A0A2V3IME3 (VWFA domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IME3_9FLOR)

HSP 1 Score: 174 bits (440), Expect = 5.670e-48
Identity = 103/273 (37.73%), Postives = 153/273 (56.04%), Query Frame = 0
Query:    1 MRILSPPKENVEAVLNALESIPTYPDGPRTTLTALSSVQRYSQQLFPRHWRKTVVLIGDTPGREPECYQQMGRNEVSRSLFDDSPSVTLSYGISVIPASLGEPGLDAALPPIQPCSNRNIPAERRPVASGQASKIAEKTKGEVVTSISASGMFEAVDRVRRKSLVFYQSEPGAKISISMQSIVSHGIYYHPNMEPSINGCEDKVIVNMTGISSFVSEPAQITGKVKLELPDGICQSGPFSCKIRIKDRVIGQESLSHWIFPPTYYKDITVRAC 273
            + +LS   + V+  L ALESIP   DG RTT+TAL ++      L  R  ++ +VLIGD PGREP+C     RN  +R +    PS T+      I  SLG  GL++ALP    C N +   +  P+A GQA  I  +T GEVV  ++A+ +  AVD VRR+ + +Y   PG+ I +S  S   +   Y P ++   NGC +KV +  +G+ +F+S PA++T  V + LP G+C  GPF+C+IR+ +   G E  S W  P  +++ I +  C
Sbjct:  167 LSVLSAVTDYVDPALEALESIPETVDGTRTTITALKTLSSSVAGLNLRGNKRIIVLIGDRPGREPDC-----RNGYNRDMV--LPSSTM------ISVSLGSDGLNSALPAPSACMNGSY-YDPSPIAVGQARDIVNRTNGEVVEIVTAASLLWAVDTVRRRPVYWYNRPPGSNIRVSSASFPLYRGPYTPPVQRYSNGCGNKVYLRTSGLPAFISAPAEVTASVHVALPKGVCIHGPFTCEIRVVEIRRGGEYPSSWSIPFEHFEVIKIHGC 425          
BLAST of Ggra9659.t1 vs. uniprot
Match: A0A2V3IEV7 (VWFA domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IEV7_9FLOR)

HSP 1 Score: 145 bits (366), Expect = 6.630e-38
Identity = 88/271 (32.47%), Postives = 147/271 (54.24%), Query Frame = 0
Query:   10 NVEAVLNALESIPTYPDGPRTTLTALSSVQRYSQQLFPRHW---RKTVVLIGDTPGREPECYQQMGRNEVSRSLFDDSPSVTLSYGISVIPASLGEPGLDAALPPIQPCSNRNIPAERRPVASGQASKIAEKTKGEVVTSISASGMFEAVDRVRRKSLVFYQSEPGAKISISMQSIVSHGIYYHPNM----EPSINGCEDKVIVNMTGISSFVSEPAQITGKVKLELPDGICQSGPFSCKIRIKDRVIGQESLSHWIFPPTYYKDITVRAC 273
            +V     AL++IP   DGPRT++TA+ S+ ++     P      R+ +VL+GDTPGREPEC   +  + +S S          S    V+  +L  PGL+AALP    C      A    +  GQ +++A+ ++GE+++ +++S + E++ ++R  +      + G+ IS+ +    ++  Y  P+       +  GC+D+VI+  + I  F   P Q+TGK+ L LP GICQ GPF C++ +K+R + + S SHW  P  +   I V+AC
Sbjct:   87 DVNRAAEALDNIPIVADGPRTSITAMWSIMQHQDGTIPLGLFANRRIIVLVGDTPGREPECRHGIKSDRMSFS----------SQRTRVMVVNLASPGLNAALPAPAACGYITSAA----IPEGQGTRLADTSEGELISQVTSSKLRESILKLRMNAANGLHGK-GSHISV-LSKTYTYTEYTCPSSFCARTITTKGCDDRVIIRKSNIPDFAHGPVQMTGKISLSLPAGICQRGPFYCEVEVKER-LERFSYSHWSLPQRHTHLIGVKAC 340          
The following BLAST results are available for this feature:
BLAST of Ggra9659.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3IME35.670e-4837.73VWFA domain-containing protein n=1 Tax=Gracilariop... [more]
A0A2V3IEV76.630e-3832.47VWFA domain-containing protein n=1 Tax=Gracilariop... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000965_piloncontigtig00000965_pilon:61898..62719 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra9659.t1Ggra9659.t1Gracilaria gracilis GNS1m malemRNAtig00000965_pilon 61898..62719 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra9659.t1 ID=Ggra9659.t1|Name=Ggra9659.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=274bp
MRILSPPKENVEAVLNALESIPTYPDGPRTTLTALSSVQRYSQQLFPRHW
RKTVVLIGDTPGREPECYQQMGRNEVSRSLFDDSPSVTLSYGISVIPASL
GEPGLDAALPPIQPCSNRNIPAERRPVASGQASKIAEKTKGEVVTSISAS
GMFEAVDRVRRKSLVFYQSEPGAKISISMQSIVSHGIYYHPNMEPSINGC
EDKVIVNMTGISSFVSEPAQITGKVKLELPDGICQSGPFSCKIRIKDRVI
GQESLSHWIFPPTYYKDITVRAC*
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