Ggra9658.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Ggra9658.t1
Unique Name	Ggra9658.t1
Type	polypeptide
Organism	Gracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length	247

Homology

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BLAST of Ggra9658.t1 vs. uniprot
Match: A0A2V3ICQ0 (Uncharacterized protein n=3 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ICQ0_9FLOR)

HSP 1 Score: 390 bits (1001), Expect = 1.730e-135
Identity = 191/245 (77.96%), Postives = 210/245 (85.71%), Query Frame = 0

Query:    1 MRFYSIVCCAVLSLLLSGTFAQKLTLKSCKQMCARQHMSHLRSSTCSSKSTRSAVRTARVAAGGSCSSDADCSDGYACAASKTCNKVVKDVSYYVWTNDYCEVFINGQYQGYVPTGFGVVQFKYSGTCDDIIMKVTNTGDYISSGIVMNYGGWNHGSQGFHQAPNGIALPIYGRAKLSPEGNFTNNDPSYDYMSWNEAVYAVDMEQTGNFPKSMKDAGADPVTSDDVYTPDDTVMGIRYEFPECY 245
            MRFYSI+  A L LLLS   AQKLTLK+CK+MC R+ +S L S TCS+K+T SA        GG CSSDADC++GY CAASKTCNK+V++V YYVWTNDYCE+FIN QYQG+VP+GF VV+F YSGTCDDIIMKVTN  DYISSGIVM YGGWNH SQGFHQAPNGIA+PIYGRAKLSPEGNFTNN PSYDYMSWNEAVYA DM+QTGNFP+SMKDAGADPVTSDDV TP DTVMGIRYEFPECY
Sbjct:    1 MRFYSILSSARLVLLLSNGLAQKLTLKACKRMCGREQISRLSSKTCSAKATSSAAXXXXXXXGGVCSSDADCAEGYGCAASKTCNKIVENVDYYVWTNDYCEIFINRQYQGFVPSGFDVVKFTYSGTCDDIIMKVTNGYDYISSGIVMKYGGWNHASQGFHQAPNGIAIPIYGRAKLSPEGNFTNNYPSYDYMSWNEAVYAADMDQTGNFPQSMKDAGADPVTSDDVLTPLDTVMGIRYEFPECY 245

[Close]

BLAST of Ggra9658.t1 vs. uniprot
Match: A0A2V3IDN0 (Uncharacterized protein n=2 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IDN0_9FLOR)

HSP 1 Score: 349 bits (896), Expect = 1.730e-119
Identity = 175/246 (71.14%), Postives = 198/246 (80.49%), Query Frame = 0

Query:    1 MRFYSIVCCAVLSLLL-SGTFAQKLTLKSCKQMCARQHMSHLRSSTCSSKSTRSAVRTARVAAGGSCSSDADCSDGYACAASKTCNKVVKDVSYYVWTNDYCEVFINGQYQGYVPTGFGVVQFKYSGTCDDIIMKVTNTGDYISSGIVMNYGGWNHGSQGFHQAPNGIALPIYGRAKLSPEGNFTNNDPSYDYMSWNEAVYAVDMEQTGNFPKSMKDAGADPVTSDDVYTPDDTVMGIRYEFPECY 245
            M F+S++  A+LSLLL     A  LTLK CKQ+C+R+      +     ++T+S+VRT +V AGGSCSSD          ASKTCNKV+KDV YYV+ NDYCEVFING+YQGYVPTGF V +F YSG CDDIIMKVTNTGD+ISSGIVM YGGW HGSQGFHQ PNGIALPIYGRAKLSPEGNFTNNDPSYDYMSW EA+YA DM+ TGNFP SMK+ GADPVTSDD+YTPDDTVMGIRYEFP+CY
Sbjct:    1 MHFHSLLFFALLSLLLLRSAQAGGLTLKQCKQICSRRSACGAPTHRSPRRATKSSVRTGQVKAGGSCSSDXXXXXXXXXXASKTCNKVLKDVPYYVFANDYCEVFINGKYQGYVPTGFAVQKFTYSGVCDDIIMKVTNTGDFISSGIVMEYGGWKHGSQGFHQTPNGIALPIYGRAKLSPEGNFTNNDPSYDYMSWKEAIYAKDMDATGNFPSSMKENGADPVTSDDIYTPDDTVMGIRYEFPDCY 246

The following BLAST results are available for this feature:

BLAST of Ggra9658.t1 vs. uniprot

BLAST of Ggra9658.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A2V3ICQ0	1.730e-135	77.96	Uncharacterized protein n=3 Tax=Gracilariopsis cho...	[more]
A0A2V3IDN0	1.730e-119	71.14	Uncharacterized protein n=2 Tax=Gracilariopsis cho...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..5
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 6..16
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 22..246
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 17..21
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..21

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
tig00000965_pilon	contig	tig00000965_pilon:59368..60108 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria gracilis GNS1m male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Ggra9658.t1	Ggra9658.t1	Gracilaria gracilis GNS1m male	mRNA	tig00000965_pilon 59368..60108 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Ggra9658.t1 ID=Ggra9658.t1|Name=Ggra9658.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=247bp
MRFYSIVCCAVLSLLLSGTFAQKLTLKSCKQMCARQHMSHLRSSTCSSKS
TRSAVRTARVAAGGSCSSDADCSDGYACAASKTCNKVVKDVSYYVWTNDY
CEVFINGQYQGYVPTGFGVVQFKYSGTCDDIIMKVTNTGDYISSGIVMNY
GGWNHGSQGFHQAPNGIALPIYGRAKLSPEGNFTNNDPSYDYMSWNEAVY
AVDMEQTGNFPKSMKDAGADPVTSDDVYTPDDTVMGIRYEFPECYS*