Ggra9657.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra9657.t1
Unique NameGgra9657.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length1012
Homology
BLAST of Ggra9657.t1 vs. uniprot
Match: R7QFK7 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QFK7_CHOCR)

HSP 1 Score: 137 bits (345), Expect = 7.500e-30
Identity = 97/310 (31.29%), Postives = 131/310 (42.26%), Query Frame = 0
Query:  183 SSLGDRPAGCKSATTGCPTNTFEAADGECRACAPGERLNTRRKECVRCGHNQVSSGGASQRCFXXXXXKRPAGSRTIFENALCECDPGTAADGKGGCKRCEAGTFWQSTPVGVPQIKYEKLDYYQEP--FCSGCDKGYISAEGALECSKCAANEYTHPDDATRCVACPDGLLGRSGFFS--------FNCVDPSTECGLGSSATEYG-CNAFECPLPGKLMEDGRCTTC------VGNKFELDTC-TPCAPNHFSSRKDGIS--CQLCALVDQDGNPANAVTGRCECR------YGQGEKDGVCVPCGDG 466
            +SLG RPAGCK   TGC + TFE A GEC AC PG     ++ +C+ C  ++VS GG   +C      K P G  +IFEN+ CEC PGT  DG GGC  C +G +W         +         +P          + +    LEC  C  N +     +T C  CP       G            +C    T C  G      G C+A  CPLPG   +  +CT C      V NK + + C T  A +   +   G+S  C+ C +   + + +  V   C CR         G  +G CV C  G
Sbjct:  242 NSLGLRPAGCKHKNTGCSSETFENASGECEACMPGFFFFKKKGKCLPCLGSRVSRGGLQSKCGECPKGKVPLGDHSIFENSGCECAPGTMDDGNGGCIPCPSGFYWSRPSYNKVLLLNLARARTLQPGSXXXXXXXXFNNKSRRLECDLCLFNTFQDEIGSTECKRCPGDSRSPIGISDPKLLLPSRISCEVDETGCAPGEIRDAAGSCSARSCPLPGTFFKGSKCTRCSNGSIYVRNKRDCEKCGTGGASSGMYTSNGGLSTKCKKCPV---NTHRSIFVPRICMCRTLSYSGLSYGLLNGNCVVCPRG 548          
BLAST of Ggra9657.t1 vs. uniprot
Match: A0A2V3IS07 (MORC family CW-type zinc finger protein 4 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IS07_9FLOR)

HSP 1 Score: 125 bits (313), Expect = 2.610e-25
Identity = 122/338 (36.09%), Postives = 165/338 (48.82%), Query Frame = 0
Query:  691 NGIGAHTE----DKIQASHASHDIPDPFGDKSKPTTPALALLQTPMRTVQDIPQRGVPT-QLGSTPGMLSPNTANPFLDVTAEDVLEANPLNGIDTSKAFLDLSDIDAGLKTPSQLKPVPKRDTPQYLRSNMKG-GHPHISAQPSSDAMPHRAATKLNPPNAQPIQSVPANRVIADEGNPKQQRQQHCGAGEEVKDPNTVP--QMGEHLCLDDGMGAK-------QSSRGSLVRHCGRGVEGGSGAANGSSRERPTPGTLRV-FDISSMIPWSQIAATAAAXXXXXXXXXXRDA--GVSSQPKAKEPHPTEEGYKLKESQEEVAKLKRELQDQKHLTD 1010
            N +  H+      K +   A+ D+PDP GDK+KP TPA  LLQTP  T QD  +    T  L   PGM SPNTAN FLDV  E++L A PL GID S+ FL+  D++ GLKTPSQLK + K+ TP   R+  +    P  + +  + ++ H A      P  +         +   +    Q R+   G  E    P   P  + GE     D    K       QS                      S+ ER  P  +    D+S++IPWSQIAATAAAXXXXXXXXXX     GV SQ +  E  P +    +  S+E +++L+ EL++QK  T+
Sbjct:  785 NDVAEHSSTIRLSKEEPYEANRDMPDPLGDKNKPVTPAHNLLQTPTGTRQDDQREHCFTANLPPIPGMPSPNTANSFLDVNTENILVAPPLGGIDMSRDFLNFGDLELGLKTPSQLKLLSKKRTPSTARTVARNQSAPQRTGRFETISL-HGADLPARIPPTEQHSPSDQKELPKSQSKGVQSRRTRTGNDERTCHPTISPVDRYGEKRDSTDRKTLKHTKVNKQQSEVXXXXXXXXXXXXXXXXXXXDSTHERAGPADMCTPSDLSAVIPWSQIAATAAAXXXXXXXXXXAGNANGVRSQSRI-EYQPPQASSAVNASKERISELREELREQKKQTE 1120          
The following BLAST results are available for this feature:
BLAST of Ggra9657.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
R7QFK77.500e-3031.29Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A2V3IS072.610e-2536.09MORC family CW-type zinc finger protein 4 n=1 Tax=... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 988..1008
NoneNo IPR availableSMARTSM01411GCC2_GCC3_2coord: 53..98
e-value: 1.2E-5
score: 34.7
coord: 15..50
e-value: 68.0
score: 0.4
coord: 389..430
e-value: 6.5
score: 9.7
coord: 317..385
e-value: 12.0
score: 7.2
coord: 164..214
e-value: 1.0
score: 16.8
coord: 108..161
e-value: 0.062
score: 22.4
NoneNo IPR availableGENE3D2.10.220.10coord: 76..195
e-value: 7.1E-6
score: 27.7
NoneNo IPR availableGENE3D2.10.50.10Tumor Necrosis Factor Receptor, subunit A, domain 2coord: 19..75
e-value: 5.9E-7
score: 31.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 861..881
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 963..1011
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 977..1011
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 903..933
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 491..520
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 474..520
NoneNo IPR availablePANTHERPTHR46967INSULIN-LIKE GROWTH FACTOR BINDING PROTEIN,N-TERMINALcoord: 208..380
coord: 28..143
coord: 140..287
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..17
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 13..17
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..1
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 2..12
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 18..1011
IPR011641Tyrosine-protein kinase ephrin type A/B receptor-likePFAMPF07699Ephrin_rec_likecoord: 156..183
e-value: 9.2E-6
score: 25.3
IPR009030Growth factor receptor cysteine-rich domain superfamilySUPERFAMILY57184Growth factor receptor domaincoord: 125..283
IPR009030Growth factor receptor cysteine-rich domain superfamilySUPERFAMILY57184Growth factor receptor domaincoord: 17..147

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000965_piloncontigtig00000965_pilon:40301..51904 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra9657.t1Ggra9657.t1Gracilaria gracilis GNS1m malemRNAtig00000965_pilon 40301..51904 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra9657.t1 ID=Ggra9657.t1|Name=Ggra9657.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=1012bp
MFLHAVQFILLATAIYALCPPGSRLENDRCISCPDGLYPTAFGEPRCTTC
NPGFELEEFGSRCLECRHGFFKTTLGVSCSRCPPGMSSVLGATKCQRCPA
GTIPDPDGSKRFPFDSAYSAEQLGCKKCPPNQFAARTASDECKLCPIGTI
ATPDGTGCVSCPAGTFRLLISSTSCEPCPAGTSSLGDRPAGCKSATTGCP
TNTFEAADGECRACAPGERLNTRRKECVRCGHNQVSSGGASQRCFACAPG
KRPAGSRTIFENALCECDPGTAADGKGGCKRCEAGTFWQSTPVGVPQIKY
EKLDYYQEPFCSGCDKGYISAEGALECSKCAANEYTHPDDATRCVACPDG
LLGRSGFFSFNCVDPSTECGLGSSATEYGCNAFECPLPGKLMEDGRCTTC
VGNKFELDTCTPCAPNHFSSRKDGISCQLCALVDQDGNPANAVTGRCECR
YGQGEKDGVCVPCGDGEFSLDGTSAADVRLPDPLMSSKPPASSRGGDQGN
CGNTGRPNVYNESQNPTNDKEQAISGDERLINAVVSQSRPGRRNTAITCP
TRSEVTRKGKPVSVPLVREVVVHSSAQVVDINNRNSTIKVYPDTRQNIPD
ELLSASADGPVHVVSGHPQPYDTEPHTNASNAQRICERPCTVTAPKDTEP
NPQTLANTRFEGDTPETRNRRNNEEEAIKLLLNLRSRESQNGIGAHTEDK
IQASHASHDIPDPFGDKSKPTTPALALLQTPMRTVQDIPQRGVPTQLGST
PGMLSPNTANPFLDVTAEDVLEANPLNGIDTSKAFLDLSDIDAGLKTPSQ
LKPVPKRDTPQYLRSNMKGGHPHISAQPSSDAMPHRAATKLNPPNAQPIQ
SVPANRVIADEGNPKQQRQQHCGAGEEVKDPNTVPQMGEHLCLDDGMGAK
QSSRGSLVRHCGRGVEGGSGAANGSSRERPTPGTLRVFDISSMIPWSQIA
ATAAAAGAVAAAAAARDAGVSSQPKAKEPHPTEEGYKLKESQEEVAKLKR
ELQDQKHLTDT*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011641Tyr-kin_ephrin_A/B_rcpt-like
IPR009030Growth_fac_rcpt_cys_sf