Ggra9656.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra9656.t1
Unique NameGgra9656.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length175
Homology
BLAST of Ggra9656.t1 vs. uniprot
Match: A0A2V3J6U1 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J6U1_9FLOR)

HSP 1 Score: 167 bits (424), Expect = 2.300e-49
Identity = 87/175 (49.71%), Postives = 121/175 (69.14%), Query Frame = 0
Query:    1 MCEVKPCP-GGFSCTLPENSFLIPYDQLSQFEAVIEYTWSAEHRDLDTSTRWMGVDDTNVGFSCSNNSPFLRFSGDSSSYGGTEVVVLDIMLAARD-QFDDSVAIEAYAGWHGSENHGAAQMSLYLRRKSNGVLVTGTILTTPISPGYQNGCASTHVATITYFHGTEHSRFTLQR 173
            +C V+ C   G+SC++P NSF+I  +QLS  E VIEYTWS E RDLDTSTR++   D NVGFSCS+ + +L F GD++S GGTEV V+D+  A +D +++DS AI + AGW  S+N G AQM +YLRRKS+G L     ++  I+PG Q  C+  +VAT+    G+ H+R TL++
Sbjct:   49 LCAVEECEDNGYSCSMPGNSFMISNNQLSLLEFVIEYTWSPEQRDLDTSTRFL---DGNVGFSCSSANDYLDFGGDNTSKGGTEVAVIDVEKARQDGKWEDSTAIISNAGWFASDNQGGAQMKVYLRRKSDGGLAEEASVSDRINPGTQRTCSPHNVATVKIIRGSLHTRVTLEK 220          
BLAST of Ggra9656.t1 vs. uniprot
Match: A0A2V3IS11 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IS11_9FLOR)

HSP 1 Score: 132 bits (333), Expect = 1.350e-35
Identity = 77/181 (42.54%), Postives = 101/181 (55.80%), Query Frame = 0
Query:    1 MCEVKPCP------GGFSCTLPENSFLIPYDQLSQFEAVIEYTWSAEHRDLDTSTRWMGVDDTNVGFSCSNNSPFLRFSGDSSSYGGTEVVVLDIMLAARDQ-FDDSVAIEAYAGWHGSENHGAAQMSLYLRRKSNGVLVTGTILTTPISPGYQNGCASTHVATITYFHGTEHSRFTLQRV 174
            +C V+ C        GFSC+LPE SFL+   +L Q+E VI Y W +  RDLDTSTR++G    NVGF C  NS +LR+ GDSS  GG E VV+D   A RD  +    +I+ +AGWHGS+  G A + + +RR  N     G  L   I PG Q  C+   VA +  F G   +R TL  +
Sbjct:   50 LCSVRRCSYSGQEDNGFSCSLPERSFLLKNSELWQWEMVITYWWESGKRDLDTSTRFLGA---NVGFKCGKNSKYLRWLGDSSKNGGDEQVVVDFDKARRDGLWTGRTSIQLHAGWHGSQQQGMAHVVVGMRRTDNHE--EGNNLYAFIYPGTQRTCSPHQVAAVKIFRGRHFTRVTLDHM 225          
BLAST of Ggra9656.t1 vs. uniprot
Match: A0A2V3IS72 (VWFD domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IS72_9FLOR)

HSP 1 Score: 96.7 bits (239), Expect = 4.600e-20
Identity = 52/142 (36.62%), Postives = 83/142 (58.45%), Query Frame = 0
Query:   18 NSFLIPYDQLSQFEAVIEYTWSAEHRDLDTSTRWMGVDDTNVGFSCSNNSPFLRFSGDSSSYGGTEVVVLDIMLA-ARDQFDDSVAIEAYAGWHGSENHGAAQMSLYLRRKSNGVLVTGTILTTPISPGYQNGCASTHVATI 158
             S  +P  Q   ++ V++YTW ++  DLDT TR++   D  VGF CS +  F+ FSGD++  GG+E +V+ +  A A+  +  S  + A AGW+     G A + ++LR       V+G+ L++ +SPG Q+ CAST V T+
Sbjct: 1060 TSVSVPNQQFEAYDLVVKYTWGSDQSDLDTGTRFL---DGIVGFRCSPSGQFMTFSGDNTGTGGSETIVVRVNAARAQGLWTSSTNVTANAGWY-RRAQGPATLRVFLRENDTLSEVSGSGLSSVVSPGVQSNCASTLVGTV 1197          
The following BLAST results are available for this feature:
BLAST of Ggra9656.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A2V3J6U12.300e-4949.71Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IS111.350e-3542.54Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IS724.600e-2036.62VWFD domain-containing protein n=1 Tax=Gracilariop... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000965_piloncontigtig00000965_pilon:37655..38179 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra9656.t1Ggra9656.t1Gracilaria gracilis GNS1m malemRNAtig00000965_pilon 37655..38179 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra9656.t1 ID=Ggra9656.t1|Name=Ggra9656.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=175bp
MCEVKPCPGGFSCTLPENSFLIPYDQLSQFEAVIEYTWSAEHRDLDTSTR
WMGVDDTNVGFSCSNNSPFLRFSGDSSSYGGTEVVVLDIMLAARDQFDDS
VAIEAYAGWHGSENHGAAQMSLYLRRKSNGVLVTGTILTTPISPGYQNGC
ASTHVATITYFHGTEHSRFTLQRV*
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