Ggra9650.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra9650.t1
Unique NameGgra9650.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length321
Homology
The following BLAST results are available for this feature:
BLAST of Ggra9650.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006597Sel1-like repeatSMARTSM00671sel1coord: 222..258
e-value: 3.3
score: 16.7
coord: 260..296
e-value: 1.1
score: 18.3
coord: 72..108
e-value: 0.084
score: 22.0
coord: 109..145
e-value: 0.0065
score: 25.7
coord: 185..221
e-value: 11.0
score: 13.4
coord: 147..183
e-value: 100.0
score: 4.9
coord: 34..70
e-value: 6.1
score: 15.6
IPR006597Sel1-like repeatPFAMPF08238Sel1coord: 186..220
e-value: 0.032
score: 14.9
coord: 261..296
e-value: 0.21
score: 12.3
coord: 73..106
e-value: 0.004
score: 17.8
coord: 299..319
e-value: 0.68
score: 10.7
coord: 110..142
e-value: 1.1E-4
score: 22.8
coord: 35..66
e-value: 0.047
score: 14.4
coord: 5..27
e-value: 54.0
score: 4.7
coord: 224..254
e-value: 1.2
score: 9.9
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 1..320
e-value: 2.9E-56
score: 192.8
NoneNo IPR availablePANTHERPTHR43628ACTIVATOR OF C KINASE PROTEIN 1-RELATEDcoord: 5..79
coord: 68..256
NoneNo IPR availablePANTHERPTHR43628:SF9SEL1-REPEAT-CONTAINING PROTEIN YBEQcoord: 5..79
coord: 68..256
NoneNo IPR availableSUPERFAMILY81901HCP-likecoord: 4..149
NoneNo IPR availableSUPERFAMILY81901HCP-likecoord: 170..311

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000266_piloncontigtig00000266_pilon:40106..41068 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra9650.t1Ggra9650.t1Gracilaria gracilis GNS1m malemRNAtig00000266_pilon 40106..41068 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra9650.t1 ID=Ggra9650.t1|Name=Ggra9650.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=321bp
MFGGMLQNGAQGVAVDANQAHELFDTAIREAGSGHAMINMALLLESGAEG
IPADPARAAAMYDKAYRERKWTSALLGLGLLSERGTIEVAANPPKAVELY
EKAIEEKSVRAMYTLACLLRTGADDVPVDIARAIELYEKAIEVGGQHGAS
VKLAHLLEDDADGTAPNGRRAAQLYEKVIEESGNLSAIFNYATVLLRGAE
GVNVDAPRAVALFERAIDGGEVVSKYQLAKALQHGAEGVAKDVPRAARLL
EESISEKNDVLAMNSLGVILQFGREGVSKNVRRDKELYERAVREGDVVES
MMNLGLLLLYGEDGIEADTE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006597Sel1-like
IPR011990TPR-like_helical_dom_sf