Ggra9649.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra9649.t1
Unique NameGgra9649.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length255
Homology
BLAST of Ggra9649.t1 vs. uniprot
Match: A0A371D1H6 (Uncharacterized protein n=1 Tax=Polyporus brumalis TaxID=139420 RepID=A0A371D1H6_9APHY)

HSP 1 Score: 62.4 bits (150), Expect = 1.590e-7
Identity = 28/92 (30.43%), Postives = 47/92 (51.09%), Query Frame = 0
Query:   45 GTEKYTLEDVNHMLDLVAQYKPINNNQWAQIASKYATYARLKCRPRRTINSLKYTFDQLLFTPNHIADLSCPPQVRRAKQINNMVLGGLHVQ 136
            G++ Y+ ED+  +LDL  +  PI  N W Q+  ++  +A    RP RT   LK  F+ ++ TP    +   PP + RA  I + +   +H +
Sbjct:  135 GSQNYSEEDLESLLDLTQEILPIGQNAWGQVTRRFNEWAEQNGRPPRTQKPLKTKFETMVRTPKPTGNAEIPPHIERAYDIEHSINEKVHTR 226          
BLAST of Ggra9649.t1 vs. uniprot
Match: A0A8H6ZBD8 (Uncharacterized protein n=1 Tax=Mycena venus TaxID=2733690 RepID=A0A8H6ZBD8_9AGAR)

HSP 1 Score: 58.5 bits (140), Expect = 2.930e-6
Identity = 23/88 (26.14%), Postives = 48/88 (54.55%), Query Frame = 0
Query:   42 KHRGTEKYTLEDVNHMLDLVAQYKPINNNQWAQIASKYATYARLKCRPRRTINSLKYTFDQLLFTPNHIADLSCPPQVRRAKQINNMV 129
            + +G++ ++  D+  +LDLV ++ P+    W  +   +  +A    RP+R   +++  +  LL T     D  CPP+++RA QI +++
Sbjct:  185 RRKGSQNWSKNDMGKLLDLVQKHLPLGQKGWKLVTDDFCKWAERSGRPQRDGKAIEAKYKTLLKTKKPTGDAHCPPEIKRAHQIESLI 272          
BLAST of Ggra9649.t1 vs. uniprot
Match: uncharacterized protein n=3 Tax=Suillus clintonianus TaxID=1904413 RepID=UPI001B86DC40 (uncharacterized protein n=3 Tax=Suillus clintonianus TaxID=1904413 RepID=UPI001B86DC40)

HSP 1 Score: 57.8 bits (138), Expect = 4.300e-6
Identity = 30/85 (35.29%), Postives = 44/85 (51.76%), Query Frame = 0
Query:   45 GTEKYTLEDVNHMLDLVAQYKPINNNQWAQIASKYATYARLKCRPRRTINSLKYTFDQLLFTPNHIADLSCPPQVRRAKQINNMV 129
            G+  Y+  DV  +LDLV   +P+    W  I  KY+ +A    RP R   SL+  F QL+ T     +  CPP V RA +I+ ++
Sbjct:   82 GSNNYSAADVQVLLDLVEDERPLGQKGWQAIHLKYSEWATSHGRPPRKAMSLETKFKQLVKTTKPTGNGVCPPDVTRAHEIDALI 166          
The following BLAST results are available for this feature:
BLAST of Ggra9649.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A371D1H61.590e-730.43Uncharacterized protein n=1 Tax=Polyporus brumalis... [more]
A0A8H6ZBD82.930e-626.14Uncharacterized protein n=1 Tax=Mycena venus TaxID... [more]
uncharacterized protein n=3 Tax=Suillus clintonianus TaxID=1904413 RepID=UPI001B86DC404.300e-635.29uncharacterized protein n=3 Tax=Suillus clintonian... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 217..237
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 6..44
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 7..44
NoneNo IPR availablePANTHERPTHR34409FAMILY NOT NAMEDcoord: 44..128

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000266_piloncontigtig00000266_pilon:37446..38210 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra9649.t1Ggra9649.t1Gracilaria gracilis GNS1m malemRNAtig00000266_pilon 37446..38210 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra9649.t1 ID=Ggra9649.t1|Name=Ggra9649.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=255bp
MDQNKISIRSLIRKPEHGLGEKDGGDEHGKRNDNSGCQSADKHRGTEKYT
LEDVNHMLDLVAQYKPINNNQWAQIASKYATYARLKCRPRRTINSLKYTF
DQLLFTPNHIADLSCPPQVRRAKQINNMVLGGLHVQVCNSNLHQYEKPNC
PCIEPRKANQPSRPKGVPVPIATAWRKRRARSMSVLNSKQVQLALLNSVH
EISNCMKRVAEAQLRSIAKAQANENQLKTLIEKTVEQTVRRLLQRNNNKD
PSKS*
back to top