Ggra9647.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Ggra9647.t1
Unique Name	Ggra9647.t1
Type	polypeptide
Organism	Gracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length	290

Homology

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BLAST of Ggra9647.t1 vs. uniprot
Match: A0A7K7SLM5 (ALKB2 demethylase (Fragment) n=1 Tax=Sapayoa aenigma TaxID=239371 RepID=A0A7K7SLM5_9TYRA)

HSP 1 Score: 84.3 bits (207), Expect = 1.200e-15
Identity = 49/135 (36.30%), Postives = 74/135 (54.81%), Query Frame = 0

Query:    8 LSTGNSNESYTSRVWSPAMRRLRDRVQSDVGKTFDYVLLNHYDGGHNHIHFHSD---KLVPNALVASISFGQTRTFRTRNK-------KTGLET-DYELADGDMFLFDGAFDSTHWHAVTPGVHGCKLRINLTFR 131
            LS   S  ++  + W P + R+R+R+  D G TF++VL+N Y  G +HI  H D   +LVP + +AS+SFG  R F  R++       K G+E    ELA G + + +   +   +H+V P    C  R+NLTFR
Sbjct:   95 LSYTYSGVTFHPKPWIPVLNRIRERITLDTGHTFNFVLINRYKDGLDHIGEHRDDEKELVPRSPIASVSFGACRDFILRHRDCRGKGAKGGIERIKLELAHGSLLMMNHPTNVYWYHSVPPRRRVCTPRVNLTFR 229

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BLAST of Ggra9647.t1 vs. uniprot
Match: A0A349LUZ7 (Alpha-ketoglutarate-dependent dioxygenase AlkB n=1 Tax=Rheinheimera sp. TaxID=1869214 RepID=A0A349LUZ7_9GAMM)

HSP 1 Score: 82.4 bits (202), Expect = 2.230e-15
Identity = 44/120 (36.67%), Postives = 64/120 (53.33%), Query Frame = 0

Query:   17 YTSRVWSPAMRRLRDRVQSDVGKTFDYVLLNHYDGGHNHIHFHSD---KLVPNALVASISFGQTRTFRTRNKKTGLETDYELADGDMFLFDGAFDSTHWHAVTPGVHGCKLRINLTFRYM 133
            ++   W+P + ++   V    G  F+ VLLN YDGG  H+ +HSD   +L  + ++AS+S GQ+R F  R+K  G +    LADGD+ L  G       HA+         R NLTFRY+
Sbjct:   58 FSPEPWTPILLQVTSMVSQLTGHPFNCVLLNRYDGGGEHMGWHSDDEPELGESPVIASLSLGQSRRFDLRHKDLGCQLQLTLADGDLLLMAGECQRFWQHALPKQARAEGTRYNLTFRYI 177

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BLAST of Ggra9647.t1 vs. uniprot
Match: F4QDY8 (Alkylated DNA repair protein n=1 Tax=Cavenderia fasciculata (strain SH3) TaxID=1054147 RepID=F4QDY8_CAVFA)

HSP 1 Score: 83.6 bits (205), Expect = 1.210e-14
Identity = 46/114 (40.35%), Postives = 65/114 (57.02%), Query Frame = 0

Query:   22 WSPAMRRLRDRVQSDVGKTFDYVLLNHYDGGHNHIHFHSDKLV--PNAL-VASISFGQTRTFRTRNKKTGLETDYELADGDMFLFDGAFDSTHW-HAVTPGVHGCKLRINLTFR 131
            W+P M +LR+ +++ +   FDYVL+N+Y  GH+HI +HSDK    P  + +AS+S G TR F  RN KT    +Y L  G + + D      HW H +   +     RINLTFR
Sbjct:  248 WTPPMLKLRECLETLLDTKFDYVLVNYYKDGHDHIGYHSDKEARDPETMTIASLSLGTTRRFLLRNIKTNETIEYSLEPGSLIVMDQQ-TQVHWKHCIPKELKVITSRINLTFR 360

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BLAST of Ggra9647.t1 vs. uniprot
Match: A0A1H2C9J4 (Alkylated DNA repair dioxygenase AlkB n=2 Tax=Mucilaginibacter TaxID=423349 RepID=A0A1H2C9J4_9SPHI)

HSP 1 Score: 80.1 bits (196), Expect = 2.300e-14
Identity = 46/123 (37.40%), Postives = 66/123 (53.66%), Query Frame = 0

Query:   13 SNESYTSRVWSPAMRRLRDRVQSDVGKTFDYVLLNHYDGGHNHIHFHSD---KLVPNALVASISFGQTRTFRTRNKKTGLET-DYELADGDMFLFDGAFDSTHWHAVTPGVHGCKLRINLTFR 131
            S E Y    W+  ++ +R+RVQ   G  F+ VLLN+Y  G++ + +HSD   +L  + +VAS+SFGQ R+F  RNKK   +    +L DG   L  G       H +       K R+NLTFR
Sbjct:   77 SGEKYDPLPWTDELQTIRERVQILSGINFNSVLLNYYRDGNDSVAWHSDNEDELGKHPVVASVSFGQVRSFDIRNKKDHTQKYSIKLEDGSYLLMKGDLQENWEHRIAKSTKPMKERVNLTFR 199

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BLAST of Ggra9647.t1 vs. uniprot
Match: A0A8C6NG34 (AlkB homolog 2, alpha-ketoglutarate dependent dioxygenase n=2 Tax=Melopsittacus undulatus TaxID=13146 RepID=A0A8C6NG34_MELUD)

HSP 1 Score: 79.3 bits (194), Expect = 3.050e-14
Identity = 49/142 (34.51%), Postives = 76/142 (53.52%), Query Frame = 0

Query:   13 SNESYTSRVWSPAMRRLRDRVQSDVGKTFDYVLLNHYDGGHNHIHFHSD---KLVPNALVASISFGQTRTF-----RTRNKKTGLETD---YELADGDMFLFDGAFDSTHWHAVTPGVHGCKLRINLTFRYMNIYVLRPLPH 143
            S  +++ + W P + R+R+RV SD G TF++VL+N YDG  +HI  H D   +LVP + +AS+SFG  R F      +R KK          +LA G + +     +   +H++ P       R+NLTFR + + +  P PH
Sbjct:   41 SGVTFSPKPWIPVLNRIRERVTSDTGHTFNFVLINRYDG-EDHIGEHRDDERELVPRSPIASVSFGACRDFVFRHCASRGKKATRHIKPIKLQLAHGSLLMMKYPTNVYWYHSLPPRKRVLAPRVNLTFRKVMVSIT-PGPH 180

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BLAST of Ggra9647.t1 vs. uniprot
Match: F4PVZ1 (Fe2OG dioxygenase domain-containing protein n=1 Tax=Cavenderia fasciculata (strain SH3) TaxID=1054147 RepID=F4PVZ1_CAVFA)

HSP 1 Score: 81.6 bits (200), Expect = 3.380e-14
Identity = 49/124 (39.52%), Postives = 70/124 (56.45%), Query Frame = 0

Query:   19 SRVWSPAMRRLRDRVQSDVGKTFDYVLLNHYDGGHNHIHFHSD---KLVPNALVASISFGQTRTFRTRNKKTGLE-TDYELADGDMFLFDGAFDSTHWHAVTPGVHGCKLRINLTFRYMNIYVL 138
            +R WS  M  L+ +++S +G+TFDYVL+N+Y  G+++I +HSD   K     ++AS+S G TR F  RN K   E  +Y L +G + + D    ST  H V         RINLTFR  N  V+
Sbjct:  183 AREWSVPMLHLKHQLESLLGQTFDYVLINYYRDGNDYIGYHSDGEAKKEAFNVIASVSLGTTRRFILRNNKDNKEKVEYSLNNGSLLVMDRDTQSTWKHQVPKQPKVLTPRINLTFRKNNNVVV 306

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BLAST of Ggra9647.t1 vs. uniprot
Match: alpha-ketoglutarate-dependent dioxygenase AlkB n=1 Tax=Mucilaginibacter sp. UR6-11 TaxID=1435644 RepID=UPI001E323C21 (alpha-ketoglutarate-dependent dioxygenase AlkB n=1 Tax=Mucilaginibacter sp. UR6-11 TaxID=1435644 RepID=UPI001E323C21)

HSP 1 Score: 79.3 bits (194), Expect = 4.230e-14
Identity = 44/114 (38.60%), Postives = 65/114 (57.02%), Query Frame = 0

Query:   22 WSPAMRRLRDRVQSDVGKTFDYVLLNHYDGGHNHIHFHSDK---LVPNALVASISFGQTRTFRTRNKKTGLETDYELADGDMFLFDGAFDSTHW-HAVTPGVHGCKLRINLTFR 131
            W+P +  +++R++   G  F+ VLLN+Y  G++ + +HSD+   L  N ++ASISFGQ R+F  RNKK  LE      +   FL   A    HW H V   +   + R+NLTFR
Sbjct:   86 WTPELLMIKERIEPVAGIKFNSVLLNYYRDGNDSVAWHSDREDVLGKNPVIASISFGQVRSFDIRNKKNHLEKYSVRLEHGSFLLMKAGLQEHWEHRVAKSIKPMQARMNLTFR 199

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BLAST of Ggra9647.t1 vs. uniprot
Match: A0A851ET49 (ALKB2 demethylase (Fragment) n=1 Tax=Pitta sordida TaxID=9163 RepID=A0A851ET49_PITSO)

HSP 1 Score: 80.1 bits (196), Expect = 4.340e-14
Identity = 47/135 (34.81%), Postives = 73/135 (54.07%), Query Frame = 0

Query:    8 LSTGNSNESYTSRVWSPAMRRLRDRVQSDVGKTFDYVLLNHYDGGHNHIHFHSD---KLVPNALVASISFGQTRTF-------RTRNKKTGL-ETDYELADGDMFLFDGAFDSTHWHAVTPGVHGCKLRINLTFR 131
            LS   S  ++  + W P + R+R+R+  + G TF++VL+N Y  G +HI  H D   +LVP++ +AS+SFG  R F       R +  K G      ELA G + + +   ++  +H+V P    C  R+NLTFR
Sbjct:  103 LSYTYSGVTFHPKPWIPVLNRIRERLALNTGHTFNFVLINRYKDGLDHIGEHRDDEKELVPHSPIASVSFGACRDFILRHRDCRAKGTKGGPGRIKLELAHGSLLMMNHPTNTYWYHSVPPRRRVCAPRVNLTFR 237

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BLAST of Ggra9647.t1 vs. uniprot
Match: A0A4R5ASL8 (Alpha-ketoglutarate-dependent dioxygenase AlkB n=1 Tax=Flavobacterium caseinilyticum TaxID=2541732 RepID=A0A4R5ASL8_9FLAO)

HSP 1 Score: 79.3 bits (194), Expect = 4.750e-14
Identity = 45/115 (39.13%), Postives = 64/115 (55.65%), Query Frame = 0

Query:   22 WSPAMRRLRDRVQSDVGKTFDYVLLNHYDGGHNHIHFHSDK---LVPNALVASISFGQTRTFRTRNK--KTGLETDYELADGDMFLFDGAFDSTHWHAVTPGVHGCKLRINLTFR 131
            W+P +  ++DRV+ +  K F+ VLLN Y  G++ + +HSD+     PNA++AS+SFG+TR FR R+K  K     +  L  G + L  G   S   H V         RINLTFR
Sbjct:   88 WTPELLSIKDRVEKETQKKFNSVLLNLYRNGNDGVGWHSDREQNFGPNAIIASVSFGETRMFRLRHKFRKEIPSVEIPLHHGSLLLMAGTTQSFWQHQVPKTTKDILPRINLTFR 202

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BLAST of Ggra9647.t1 vs. uniprot
Match: A0A7K5UWZ5 (ALKB2 demethylase (Fragment) n=3 Tax=Passeriformes TaxID=9126 RepID=A0A7K5UWZ5_9CORV)

HSP 1 Score: 79.0 bits (193), Expect = 5.850e-14
Identity = 49/135 (36.30%), Postives = 70/135 (51.85%), Query Frame = 0

Query:    8 LSTGNSNESYTSRVWSPAMRRLRDRVQSDVGKTFDYVLLNHYDGGHNHIHFHSD---KLVPNALVASISFGQTRTF----RTRNKKTGL----ETDYELADGDMFLFDGAFDSTHWHAVTPGVHGCKLRINLTFR 131
            LS   S   +  + W P + R+RDRV S+ G TF++VL+N Y  G +HI  H D   +LVP++ +AS+SFG  R F    R R  K G         +LA G + L     +   +H++ P       R+NLTFR
Sbjct:   60 LSYTYSGVMFHPKPWIPVLTRIRDRVTSETGHTFNFVLINRYKDGLDHIGEHRDDEKELVPHSPIASVSFGACRDFVFRRRDRRGKGGTPGTGRISLQLAHGSLLLMKHPTNRHWYHSLPPRRRVLAPRVNLTFR 194

The following BLAST results are available for this feature:

BLAST of Ggra9647.t1 vs. uniprot

BLAST of Ggra9647.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A7K7SLM5	1.200e-15	36.30	ALKB2 demethylase (Fragment) n=1 Tax=Sapayoa aenig...	[more]
A0A349LUZ7	2.230e-15	36.67	Alpha-ketoglutarate-dependent dioxygenase AlkB n=1...	[more]
F4QDY8	1.210e-14	40.35	Alkylated DNA repair protein n=1 Tax=Cavenderia fa...	[more]
A0A1H2C9J4	2.300e-14	37.40	Alkylated DNA repair dioxygenase AlkB n=2 Tax=Muci...	[more]
A0A8C6NG34	3.050e-14	34.51	AlkB homolog 2, alpha-ketoglutarate dependent diox...	[more]
F4PVZ1	3.380e-14	39.52	Fe2OG dioxygenase domain-containing protein n=1 Ta...	[more]
alpha-ketoglutarate-dependent dioxygenase AlkB n=1 Tax=Mucilaginibacter sp. UR6-11 TaxID=1435644 RepID=UPI001E323C21	4.230e-14	38.60	alpha-ketoglutarate-dependent dioxygenase AlkB n=1...	[more]
A0A851ET49	4.340e-14	34.81	ALKB2 demethylase (Fragment) n=1 Tax=Pitta sordida...	[more]
A0A4R5ASL8	4.750e-14	39.13	Alpha-ketoglutarate-dependent dioxygenase AlkB n=1...	[more]
A0A7K5UWZ5	5.850e-14	36.30	ALKB2 demethylase (Fragment) n=3 Tax=Passeriformes...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR037151	Alpha-ketoglutarate-dependent dioxygenase AlkB-like superfamily	GENE3D	2.60.120.590		coord: 4..133 e-value: 7.0E-30 score: 106.2
IPR027450	Alpha-ketoglutarate-dependent dioxygenase AlkB-like	PFAM	PF13532	2OG-FeII_Oxy_2	coord: 15..131 e-value: 3.5E-18 score: 66.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 221..236
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 199..213
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 184..236
None	No IPR available	PANTHER	PTHR31212:SF4	ALPHA-KETOGLUTARATE-DEPENDENT DIOXYGENASE ALKB HOMOLOG 3	coord: 18..133
None	No IPR available	SUPERFAMILY	51197	Clavaminate synthase-like	coord: 17..133
IPR032854	Alkylated DNA repair protein alkB homologue 3	PANTHER	PTHR31212	ALPHA-KETOGLUTARATE-DEPENDENT DIOXYGENASE ALKB HOMOLOG 3	coord: 18..133
IPR005123	Oxoglutarate/iron-dependent dioxygenase	PROSITE	PS51471	FE2OG_OXY	coord: 40..134 score: 8.582544

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
tig00000266_pilon	contig	tig00000266_pilon:22840..23709 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria gracilis GNS1m male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Ggra9647.t1	Ggra9647.t1	Gracilaria gracilis GNS1m male	mRNA	tig00000266_pilon 22840..23709 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Ggra9647.t1 ID=Ggra9647.t1|Name=Ggra9647.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=290bp
MSDIPVTLSTGNSNESYTSRVWSPAMRRLRDRVQSDVGKTFDYVLLNHYD
GGHNHIHFHSDKLVPNALVASISFGQTRTFRTRNKKTGLETDYELADGDM
FLFDGAFDSTHWHAVTPGVHGCKLRINLTFRYMNIYVLRPLPHERVHFVQ
GKTVSNRGIKVDPASLRKRRLAHERKRVRELRRRVQSPQVVQPRNVSKHP
PRPKQDHFKHGEGVSRGVVLPSETERRKMRMADERRRRGLELRGGLKAPQ
YANSWKPLKSPYLVPFSSTGTNWSTIYSGIKTEKPSDTR*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR037151	AlkB-like_sf
IPR027450	AlkB-like
IPR032854	ALKBH3
IPR005123	Oxoglu/Fe-dep_dioxygenase