Ggra9645.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra9645.t1
Unique NameGgra9645.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length280
Homology
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BLAST of Ggra9645.t1 vs. uniprot
Match: A0A2V3ITE7 (Uncharacterized protein n=4 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ITE7_9FLOR)

HSP 1 Score: 195 bits (496), Expect = 3.170e-56
Identity = 113/293 (38.57%), Postives = 153/293 (52.22%), Query Frame = 0 
Query:    5 VSQLPRHVLQRIFHIGIT-------EVW-----------CSSDQDMEDHEXXXXXXXXXXXXXXXXXDNGFSDRFKPDYDPFRNLPELVTLMDCAVVCKAWADAIINKEFWTCIRSSSFEDALAEPWKVGKRWNALLVHVPVPILCVREMILCNVGKIVTSRSRGRYAFHVYFPSCSTHKAHIFGAWVNLQPILQKNCAYLTITNQSAA---AYSGRVTNTRVGFETLMTRKWPSLQSLDINFSMNEIISLETISEWLELLRTPKSVLSRDPPFPALRRLSFCTHVETRRRKL 276
            +S  P  VLQRIF IG++       EVW            SS +D+E                      G+   FKPD D FR +PE+ TLM CA VCK W+DAII K FW    ++   +  AEPWK+G+RWNAL  HVPVPIL   +  L N+GKI TS  RGR +FHVY P  S  +     AW +L+P L+    +L ++N +      + G+    RVGF+TL   +WP LQSLD++ + N I+S   +    EL    + V+  + PFP L++LS  T    R  +L
Sbjct:    1 MSNFPCDVLQRIFSIGVSIFSIGVREVWRPAHGEYAHLSVSSAEDVE---------------------GGYRLLFKPDRDDFRGIPEVFTLMQCAQVCKVWSDAIIEKRFWDSNVTTMLGEQYAEPWKLGRRWNALFAHVPVPILGTMDQFLSNIGKIETSIRRGRPSFHVYLPLSSDRRRETIRAWCSLEPFLRTKALHLKVSNMTTGDDDLFRGK----RVGFKTLTLNEWPLLQSLDVDLAENGILSPAMVRSRTELDSKLEHVVRANLPFPCLKKLSLPTPPNGRGAQL 268
The following BLAST results are available for this feature:
BLAST of Ggra9645.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3ITE73.170e-5638.57Uncharacterized protein n=4 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 33..47
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 30..53

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000266_piloncontigtig00000266_pilon:13299..14138 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra9645.t1Ggra9645.t1Gracilaria gracilis GNS1m malemRNAtig00000266_pilon 13299..14138 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra9645.t1 ID=Ggra9645.t1|Name=Ggra9645.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=280bp
MSIRVSQLPRHVLQRIFHIGITEVWCSSDQDMEDHENDGEEGDSGESASS
DGSDNGFSDRFKPDYDPFRNLPELVTLMDCAVVCKAWADAIINKEFWTCI
RSSSFEDALAEPWKVGKRWNALLVHVPVPILCVREMILCNVGKIVTSRSR
GRYAFHVYFPSCSTHKAHIFGAWVNLQPILQKNCAYLTITNQSAAAYSGR
VTNTRVGFETLMTRKWPSLQSLDINFSMNEIISLETISEWLELLRTPKSV
LSRDPPFPALRRLSFCTHVETRRRKLFFW*
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