Ggra9640.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra9640.t1
Unique NameGgra9640.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length511
Homology
BLAST of Ggra9640.t1 vs. uniprot
Match: A0A2V3IYQ5 (Pre-mRNA-processing factor 19 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IYQ5_9FLOR)

HSP 1 Score: 533 bits (1374), Expect = 7.970e-184
Identity = 279/508 (54.92%), Postives = 355/508 (69.88%), Query Frame = 0
Query:    1 MYCALSGNIPKEPVVSVKSGYLFERALIEKQLAVNGNKCPETGEPLSASDLLPVKNGEHISPLPPEKSSMPHVLDHVRAEWDRLSLELHTSQKLLHETRQELATALYRCDASARVIARLEKECDELKASRGAANGDAKRADDQVNGTKEAEEQSKDQPDGREENKVSTKEDKSEPGEQLSKDKSEGTGREGEIVTLPAGIVSQAQKLAMELQETRKSRKSSAPKSSVISSFAEIGRTAVDGTDVELRAVCVNGEKTIVGCSNGKLHLVEQDMKVSFSEEAHKGGVSAMCWDERIFTGGKDGVVKVWDDDMKCKAMFDGKGTVQDIERHPLKSVMYCSRGGGFEWRNVEDGVVIGSAKVDHDCGAIHPDGLLFATGGKAGLRMWDLSSLEQVAELKTDGVTQVAMSEKGYYMVSVGTDQVLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKVVASVETKGGSDARLGIAWGPQSSFVVVGGADGVLQKFGA 508
            MYCALSGNIPKEPVVSVKSG+L+ERALIEK+L+VNGNKCPETGEPL+ +DLLPVK+G ++ PLPPEKSSMPHVLDHVRAEWDR+ LELHT+++ LH TRQELATALYRC AS R+IA+LE+E DELK S    NG+A+ A  Q    +   +  + Q    E  K   K+DK E  +    ++S+    E  I++LP G+V QA+KLA ELQE RK+RKS+AP S VISSFAE+G+TAVDG +V + A+CV+      GCS+GK+H+V+ DM VS +E+AH  GV ++C DE +FTGG+DGV+KVWD+ MKCK + DG   VQD++RHPLKS+++C R  G+EWRN+EDGVV+GSAK    CGAIHPDGLLFATG + G+RMW+LSSL+ V ELK+  V Q+ MSEKGYYMV+V  ++                                                 K+ A ++  G SD RLGIAWG Q+S ++VGG DG+L+KFGA
Sbjct:    1 MYCALSGNIPKEPVVSVKSGHLYERALIEKELSVNGNKCPETGEPLTTADLLPVKSGGYVLPLPPEKSSMPHVLDHVRAEWDRVILELHTAKRRLHVTRQELATALYRCQASERLIAKLERERDELKRSHLNPNGNAQNASQQAIDHENKADSIELQHSADE--KPEQKKDKEEVNQD---NQSQADQSENGIISLPEGLVEQARKLATELQEGRKARKSAAPGSDVISSFAELGQTAVDGAEVHVGALCVHERNIFAGCSSGKVHVVKPDMTVSHTEDAHADGVLSICLDEWLFTGGRDGVIKVWDESMKCKTIIDGADPVQDVQRHPLKSMLFCCRPNGYEWRNIEDGVVLGSAKDSISCGAIHPDGLLFATGAEKGIRMWELSSLKPVVELKSKHVQQIVMSEKGYYMVTVQPEEATVWDLRKQGIVGSVPMDGASGVALDEYGEFGCVVGTSGMNIFGAKKKAKIFARLKVSGTSDGRLGIAWGEQASCIIVGGTDGILRKFGA 503          
BLAST of Ggra9640.t1 vs. uniprot
Match: R7Q9H2 (Pre-mRNA-processing factor 19 n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q9H2_CHOCR)

HSP 1 Score: 226 bits (577), Expect = 3.940e-64
Identity = 189/529 (35.73%), Postives = 281/529 (53.12%), Query Frame = 0
Query:    1 MYCALSGNIPKEPVVSVKSGYLFERALIEKQLAVNGNKCPETGEPLSASDLLPVK-NGEHISPLPPEKSSMPHVLDHVRAEWDRLSLELHTSQKLLHETRQELATALYRCDASARVIARLEKECDELKASRGAANGDAKRADDQVNGTK-EAEEQSKDQPDGREENKVSTK---EDKSEPGEQLSKDKSEGTGREGEIVTLPAGIVSQAQKLAMELQETRKSRK--SSAPKSSVISSFAEIGRTAVDGTDVELRAVCVNGEKTIVG-CSNGKLHLVEQDMK--VSFSEEAHK-GGVSAMCWD-ERIFTGGKDGVVKVWDDDM-KCKAMFDGKGTVQDIERHPLKSVMYCSRGGG-FEWRNVEDGVVI-GSAKVDHDCGAIHPDGLLFATGGKAGL-RMWDLSSLEQVAELKTDG--VTQVAMSEKGYYMVSVGTDQVLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKVVASV---ETKGGSDARLGIAWGPQSSFVVVGGADGVLQKFGA 508
            M+C++SG +P  PVVS KSG++FER LIE+ L  +  +CPETGEPLS SDL+ +K +G  + PL P + S+P VL H++ EWD   LELH  +  L+ETR+ELA ALY+ + + RVIA++ ++  E   +R +         D+ NG + EA    + + D  +++K S +   +DK   G   + D S  T  E      P  ++ + +  + ELQ+ RK RK  +S  ++  + S +E G+ AVDG++  + ++    +  + G  S+GKL  ++      V  +   H  GGV  + WD ER+ + G  G VK+WD    +    ++  G V D++ HP K V++     G + WR +   VV  G     +  G +HPDG++FATG   G+  MWDL +++ VAEL   G  V  + MSEKGYYM S       XXXXXXXXXXXXXX                                 K V  V   + + G   R G AWG  +  +VVGGADG ++++GA
Sbjct:   10 MFCSISGIVPDVPVVSAKSGHIFERRLIEQALEASDGRCPETGEPLSTSDLIEIKKSGTVVEPLVPAEVSVPGVLRHLQKEWDTTMLELHQVKTELNETRKELANALYKYETAERVIAKMNQDMKESATARASDEVQT----DETNGARVEAAAAGEVKKDATQDSKTSDRVMVKDKVVTGRDATADVSSSTRTE-----FPEELLKKVKARSAELQKKRKERKVPASHARADTLKSLSETGQVAVDGSEATVTSLARGADGLMYGGTSSGKLMTLDTRGMGVVGKAVVGHTDGGVKRVRWDGERVVSCGA-GSVKIWDGQTWEQLGGWEETGEVVDVDVHPTKEVVFVVLAEGKWVWRELGGRVVCEGQGGEGYGSGVVHPDGMVFATGRTDGVVEMWDLRTMKCVAELGERGGRVVSLEMSEKGYYMASCRXXXXXXXXXXXXXXXXXXXMEGVVGLALDGVGEFGGAVGAGGVAVFMGKKKTKTVVKVPMHKWQVGGAGRQGCAWGDDAGCIVVGGADGTVRQYGA 528          
BLAST of Ggra9640.t1 vs. uniprot
Match: A0A7S0G9U0 (Pre-mRNA-processing factor 19 (Fragment) n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0G9U0_9RHOD)

HSP 1 Score: 159 bits (403), Expect = 8.930e-40
Identity = 145/452 (32.08%), Postives = 216/452 (47.79%), Query Frame = 0
Query:    1 MYCALSGNIPKEPVVSVKSGYLFERALIEKQLAVNGNKCPETGEPLSASDLLPVK-NGEHISPLPPEKSSMPHVLDHVRAEWDRLSLELHTSQKLLHETRQELATALYRCDASARVIARLEKECDELKAS------RGAANGDAKRADDQVNGTKEAEEQSKDQPDGREENKVSTKEDKSEPGEQLSKDKSEGTGREGEIVTL-----PA--GIVSQAQKLAMELQETRKSRKSSAPKSSVISSFAEIGRTAVDGTDVELRAVCVNGEK-----TIVGCSNGKLHLV-EQDMKVSFSEEAHKGGVSAMCW----DERIFTGG--KDGVVKVWDDDMKCKAMFDGKGT-VQDIERHPLKSVMY-CSRGGGFEWRNVEDGVVIGSAKVDHD-----CGAIHPDGLLFATGGKAGL-RMWDLSSLEQVAELKTDG--VTQVAMSEKGYYMVSVGT 416
            M+CA+SG  P+EPVVS KSG+++E+ LI + L  +G K PETGE L+  DL+ VK +G  + P P   +S+P  L  +R EWD + LE    ++ L  TR EL+ +LY  DAS RVIARL  E DE + +      +G    D      ++NG+    E      D  E  K        EP + LS++  E  G++ E +       PA  G++  +    +  +E+RK                      V+G  VE+    +  E        VGCS+G   ++ EQ  ++    +AH+GG+ A+      D  I TG   K  V +  D     KA F      +     HP       CS+ G +   ++E    + S  VD D     C   HPDG +FA+G + G+ R+WD+ SL  VA  +T+   V+ + +SE GY +VSVG+
Sbjct:    1 MFCAISGVTPEEPVVSKKSGHVYEKRLILQHLIASGGKDPETGEDLTEEDLVSVKVSGSSVKPTPTTNTSIPGTLTQLRNEWDSVMLESFKLKQTLKSTRLELSHSLYYYDASLRVIARLTDERDEARKALMELRKKGVYMQDGNEK--KMNGSSNLNE-----ADAMEVEKAGA----DEP-QLLSEEVIENIGKKAEALKKWRMKRPAISGLLKPSGSSGLGEKESRKYH--------------------VEGVSVEVMRTAMKVENPSYGHVFVGCSDGSCKVLNEQCTEIQSQFKAHEGGIGALAVSSASDVVISTGADQKSSVARHSDGGFSQKASFKCHSMDITGCSIHPTDDYFATCSKDGKWAVHDIETVTTLASV-VDPDGSPNLCAEFHPDGAIFASGLENGIVRVWDVRSLTSVASFETESGPVSTLTLSENGYSLVSVGS 419          
BLAST of Ggra9640.t1 vs. uniprot
Match: A0A7S0IDW5 (Pre-mRNA-processing factor 19 n=3 Tax=Micromonas TaxID=38832 RepID=A0A7S0IDW5_MICPS)

HSP 1 Score: 158 bits (399), Expect = 5.040e-39
Identity = 131/440 (29.77%), Postives = 208/440 (47.27%), Query Frame = 0
Query:    1 MYCALSGNIPKEPVVSVKSGYLFERALIEKQLAVNGNKCPETGEPLSASDLLPVKNGEHISPLPPEKSSMPHVLDHVRAEWDRLSLELHTSQKLLHETRQELATALYRCDASARVIARLEKECDELKASRGAANGDAKRADDQVNGTKEAEEQSKDQPDGREENKVSTKEDKSEPGEQLSKDKSEGTGREGEIVTLPAGIVSQAQKLAMELQETRKSRKSSAPKSSVISSFAEIGRTAVDGTDVE--------LRAVCVN---GEKTIVGCSNGKLHLVEQDM-KVSFSEEAHKGGVSAMCW-DERIFTGGKDGVVKVWDDDMKCKAMFD-GKGTVQDIERHPLKSVMYCSRGGGFEWRNVEDGVV----IGSAKVDHDCGAIHPDGLLFATGGK-AGLRMWDLSSLEQVAELK--TDGVTQVAMSEKGYYMVSVGTDQV 419
            M+C++SG  P++PV+S K+G+L+ER+LI K L   G +CP T  P++  DLLPVK+   + P     +S+P +L     EWD L LE H  +  LH TRQEL+ ALY+ DA+ RVI+RL KE DE + +   A      A                            K   S    ++  D + G G++      P  I +   K + EL + RK R+ S    S ++S  ++G+  V GT           +RA+ VN    ++   G ++G L L +    K       HK  V+ + +  + I T   D  VK+W    +  A+    +G V  +  HP+ +    S GG   W  ++ G      +     ++ CG  HPDGL+  TG   + +++WD+ + +  A+++     VT ++ SE GYY+ +   D V
Sbjct:    1 MFCSISGTTPEDPVISSKTGHLYERSLITKALQETG-ECPVTKTPMTLEDLLPVKSSTTVKPRTTAAASIPGLLSIFHNEWDALMLETHELRVDLHGTRQELSHALYQHDAACRVISRLMKERDEAREALANARAAGPSA-------------------------APGKRGPSSDAAEVDGDAA-GDGKKQRSGVPPEAIDAMTAK-SKELSKARKKREIS----STLASPEDVGKMEV-GTTAPCHATKAKGIRAIRVNPSNADEVATGGADGSLALFDAAKGKRGALMTGHKKAVTDVAFAGDAILTSSADKTVKIWRGGAEVAAVAGVHEGEVVAVSAHPMNAYAV-SIGGDGAWAFMDVGAAECLSVQRDGAEYTCGGFHPDGLILGTGAADSSVKIWDVKTSKVAAKVEGHVGAVTSMSFSENGYYLATCAQDGV 406          
BLAST of Ggra9640.t1 vs. uniprot
Match: A0A061S8V8 (Pre-mRNA-processing factor 19 n=2 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061S8V8_9CHLO)

HSP 1 Score: 156 bits (395), Expect = 2.100e-38
Identity = 135/439 (30.75%), Postives = 213/439 (48.52%), Query Frame = 0
Query:    1 MYCALSGNIPKEPVVSVKSGYLFERALIEKQLAVNGNKCPETGEPLSASDLLPVKNGEHISPLPPEKSSMPHVLDHVRAEWDRLSLELHTSQKLLHETRQELATALYRCDASARVIARLEKECDELKASRGAANGDAKRADDQVNGTKEAEEQSKDQPDGREENKVSTKEDKSEPGEQLSKDKSEGTGREGEIVTLPAGIVSQAQKLAMELQETRKSRKSSAPKSSVISSFAEIGRTAVDGTDVELRAVC--VNGEKTIVGCSN-GKLHLVEQDMKVSFSEEA-HKGGVSAMCW---DERIFTGGKDGVVKVW---DDDMKCKAMF-DGKGTVQDIERHPL-KSVMYCSRGGGFEWRNVEDG-----VVIGSAKVDHDCGAIHPDGLLFATGGKAG-LRMWDLSSLEQVA--ELKTDGVTQVAMSEKGYYMVSVGTDQV 419
            M+CA+SG++P+EPVVS  SG+LFE+ LI K L  +  +CP TGE LS  DLL ++  + + P     SS+P +L   + EWD L LE H  ++ LH+ RQEL+ ALY+ DAS RVIARL KE DE +++   A   A    D  NG + AE +   Q   R ++ ++++       E L  + S    +  +  T+P G   Q    A+ L                 +S   + +T   G  +   A+C  V G K +    N G + + + D      E A H   V+ + +    + + T   D  V++W   D+  +C  +  +    VQ +  HP  K  +  S    + + +V+       V   +    + C + HPDGL+  TGG    +R+W++ S + VA  +  T  +T ++ SE GYY+ +  TD V
Sbjct:    1 MFCAISGHVPEEPVVSRSSGHLFEKRLILKHLETDP-RCPVTGEELSKDDLLDLQTNKAVKPRTAPASSIPGLLGLFQNEWDALMLESHNLKQNLHKLRQELSHALYQHDASCRVIARLIKERDEARSALAQATRAAPA--DMENGKRPAESEDAAQEAKRAKSGITSE------AEALMTETSAKLSKSRKKRTIPEGTAGQDDIEALAL-----------------ASSHPLHKTTKGG--INHIAICPFVAGSKLLATAGNDGTVQVFDGDKGQVVGELAGHSKRVNNVAFVGGPDALITASADSTVRMWKGGDESFECVHVCKEHSQDVQGLTLHPTGKFFISASADATWAFYDVDTADCMLKVSDSNVTAPYTCASFHPDGLILGTGGTDNAVRIWEVRSSKNVATFDTHTGPITSLSFSENGYYLATSATDGV 411          
BLAST of Ggra9640.t1 vs. uniprot
Match: cell cycle control protein cwf8 n=1 Tax=Saitoella complicata (strain BCRC 22490 / CBS 7301 / JCM 7358 / NBRC 10748 / NRRL Y-17804) TaxID=698492 RepID=UPI000867509F (cell cycle control protein cwf8 n=1 Tax=Saitoella complicata (strain BCRC 22490 / CBS 7301 / JCM 7358 / NBRC 10748 / NRRL Y-17804) TaxID=698492 RepID=UPI000867509F)

HSP 1 Score: 154 bits (390), Expect = 7.690e-38
Identity = 125/431 (29.00%), Postives = 209/431 (48.49%), Query Frame = 0
Query:    1 MYCALSGNIPKEPVVSVKSGYLFERALIEKQLAVNGNKCPETGEPLSASDLLPVKNGEHISPLPPEKSSMPHVLDHVRAEWDRLSLELHTSQKLLHETRQELATALYRCDASARVIARLEKECDELKASRGAANGDAKRADDQVNGTKEAEEQSKDQPDGREENKVSTKEDKSEPGEQLSKDKSEGTGREGEIVTLPAGIVSQAQKLAMELQETRKSRKSSAP--KSSVISSFAEIGRTAVDGTDVELRAVCVNGEKTIVGCSNGKLHLVEQDMK--VSFSEEAHKGGVSAMCWDERI-FTGGKDGVVKVWDDDMKCKAMFD-GKGTVQDIERHPLKSVMYC-SRGGGFEWRNVEDGVVIG--SAKVDHDCGAIHPDGLLFATG-GKAGLRMWDLSSLEQVAELKTDG--VTQVAMSEKGYYM-VSVGTDQ 418
            M CALSG +P+ PV+S KSG +FE+ LIE  +A NG K P +GE L+  DL+ VK+ + + P PP  +S+P +L   + EWD L+LE +T ++ L  TRQEL+TALY+ DA+ RV+ARL KE DE + +    N   + A    NG                             G+ +  D+            +PA +V + ++   +L   RK RK  A    + ++++F     T V     +  A+   G   IVG   G  H V  ++K   + +E    G ++   W      T   +G+++ W+ D   +   D   G V  +  HP +  +   ++ G +   +++ G  +   ++  +      HPDG L   G  + G++++D+ + + +A + T+G  +T +  SE GY++ VS  TD+
Sbjct:    1 MVCALSGEVPQFPVISSKSGAVFEKHLIESYIAENG-KDPLSGEALTPEDLIEVKSSKIVRPRPPNVTSIPALLSVFQQEWDALALETYTLREQLATTRQELSTALYQNDAATRVVARLMKERDEARDALAKINISGRPAAS-ANG-----------------------------GDAMDVDEKPAA--------VPASVVKKIEETHGDLSAKRKKRKVPADWTTAEIVAAFETTVSTDVIAPMTKCLALDATGTIAIVG---GGSHAVLLNVKDQATLNELKEAGSIADAVWSGPTPVTAATNGIIRTWNQDGSVEKTIDPDMGQVVSVALHPSRDFLAAVAKNGTWALCDLQSGETVAKITSSDEFTVARFHPDGQLLGVGTSEGGVQIYDVRTGQVMASVNTNGGAITSLHFSENGYWLAVSSATDK 389          
BLAST of Ggra9640.t1 vs. uniprot
Match: C1MLI6 (Pre-mRNA-processing factor 19 n=1 Tax=Micromonas pusilla (strain CCMP1545) TaxID=564608 RepID=C1MLI6_MICPC)

HSP 1 Score: 153 bits (386), Expect = 3.830e-37
Identity = 132/447 (29.53%), Postives = 207/447 (46.31%), Query Frame = 0
Query:    1 MYCALSGNIPKEPVVSVKSGYLFERALIEKQLAVNGNKCPETGEPLSASDLLPVKNGEHISPLPPEKSSMPHVLDHVRAEWDRLSLELHTSQKLLHETRQELATALYRCDASARVIARLEKECDELKASRGAANGDAKRADDQVNGTKEAEEQSKDQPDGREENKVSTKEDKSEPGEQLSKDKSEGTGREGEIVTLPAGIVSQAQKLAMELQETRKSRKSSAPKSSV-------ISSFAEIGRTAVDGTDVELRAVCVN-GEKTIVGCS--NGKLHLVEQDM-KVSFSEEAHKGGVSAMCW--DERIFTGGKDGVVKVWDDDM----KCKAMFDG--KGTVQDIERHPLKSVMYCSRGGGFEWR--NVEDGVVIGSAKVDHD----CGAIHPDGLLFATGGKAG-LRMWDLSSLEQVAELK--TDGVTQVAMSEKGYYMVSVGTDQV 419
            M+CA+SG  P+ PVVSVKSG+LFE++LI K +   G KCP T   L+  D++P+     ++      +S+P +L     EWD L LE H  +K LH  RQEL+ +LY+ DA+ RVIARL KE DE +A+        + A      T  A +                        + ++ D   G+ +  +   +P  ++   Q  + EL + RK R+++   SS        +   +   +T+  G    + ++ +N G   IV  +  +G L L +  + K S     H   ++++ W     + +G  D +VKVW  +     KC +         V  +  HP  +   CS G    W   ++     + S K D D    CG  HPDGL+FATGG    +++WD+ + + VA L   T  V   + SE GYY+ +   D V
Sbjct:    1 MFCAISGVAPELPVVSVKSGHLFEKSLIAKAIQETG-KCPITKIALTLDDIIPITGNPAVNSRVFANASIPGMLATFHNEWDALMLETHQLKKDLHSVRQELSVSLYQHDAACRVIARLVKERDEARAALVNVQASGRSASTMGKRTSTAAD------------------------DDVAFDPVSGSTKRSKS-GIPTDVIDVLQSKSAELSKMRKKRETAPSLSSPEAIKLYDLKLASPCHKTSTHG----IYSLALNPGTPAIVATAGADGTLALFDASVGKRSTLLTGHGKRINSVAWAGSNLLVSGSNDKLVKVWRQESSGTYKCTSTIKDVHNNDVVAVSTHPTNTYA-CSVGADGLWALYDIVAAECLSSVKDDSDSRYLCGGFHPDGLIFATGGDDSFVKLWDMKTQKSVARLTGHTGAVAAHSFSENGYYVATAAADGV 416          
BLAST of Ggra9640.t1 vs. uniprot
Match: A0A7S3ELK3 (Pre-mRNA-processing factor 19 n=4 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3ELK3_9RHOD)

HSP 1 Score: 153 bits (386), Expect = 6.430e-37
Identity = 142/446 (31.84%), Postives = 214/446 (47.98%), Query Frame = 0
Query:    4 ALSGNIPKEPVVSVKSGYLFERALIEKQLAVNGNKCPETGEPLSASDLLPVK-NGEHISPLPPEKSSMPHVLDHVRAEWDRLSLELHTSQKLLHETRQELATALYRCDASARVIARLEKECDELKAS------RGAANGDAKRADDQVNGTKEAEEQSKDQPDGREENKVSTKEDKSEPGEQLSKDKSEGTGREGEIVTLPAGIVSQAQKLAMELQETRKSRKSSA----PKSSVISSFAEIGRTAVDGTDVELRAVCVNGEKTI-----VGCSNGKLHLV-EQDMKVSFSEEAHKGGVSAMCW----DERIFTGG--KDGVVKVWDDDMKCKAMFDGKGTVQDIER---HPLKSVMY-CSRGGGFEWRNVEDGVVIGSAKVDHD-----CGAIHPDGLLFATGGKAGL-RMWDLSSLEQVAELKTDG--VTQVAMSEKGYYMVSV 414
            ++SG  P+EPVVS KSG+++E+ LI + L  +G K PETGE ++  DL+ VK +G  + P P   +S+P  L  +R EWD + LE    ++ L  TR EL+ +LY  DAS RVIARL  E DE + +      +G    D    ++++NG+    E                     +P E    D        GE   L   ++    K A  L++ R  R + +    P++S      +  +  V+G  VE+    +  E  +     VGCS+G   ++ EQ  ++    +AH+GGV+A+      D  I TG   K  V +  D     KA F  K   QDI     HP       CS+ G +   ++E    + S  VD D     C   HPDG +FA+G + G+ R+WD+ SL  VA  +T+   V+ + +SE GY +VSV
Sbjct:    9 SVSGVTPEEPVVSKKSGHVYEKRLILQHLLASGGKDPETGEDMNEEDLINVKLSGSSVKPTPTTNASIPGTLTQLRNEWDSVMLESFKLKQTLKSTRLELSHSLYYYDASLRVIARLTDERDEARKALMELRNKGVYMQDGN--ENKMNGSSNVNEV--------------------DPMEVEKPDA-------GEPQALSEEVIENIGKKAEALKKWRMKRPAISGLLKPRASSSLVEKDSRKYHVEGVSVEVMRTAMKVENPLHGYVFVGCSDGSCKILNEQATEIQSQFKAHEGGVTALSLSSAADVVISTGADQKSCVARHGDGGFSQKASF--KYHSQDITGCSIHPTDDYFATCSKDGKWAIHDIETVTTLASV-VDPDGSPNLCAEFHPDGAIFASGLENGIVRVWDVRSLTSVASFETESGPVSTLTLSENGYSLVSV 422          
BLAST of Ggra9640.t1 vs. uniprot
Match: A0A3N4IG90 (Pre-mRNA-processing factor 19 n=1 Tax=Ascobolus immersus RN42 TaxID=1160509 RepID=A0A3N4IG90_ASCIM)

HSP 1 Score: 151 bits (382), Expect = 9.940e-37
Identity = 136/434 (31.34%), Postives = 208/434 (47.93%), Query Frame = 0
Query:    1 MYCALSGNIPKEPVVSVKSGYLFERALIEKQLAVNGNKCPETGEPLSASDLLPVKNGEHISPLPPEKSSMPHVLDHVRAEWDRLSLELHTSQKLLHETRQELATALYRCDASARVIARLEKECDELK--ASRGAANGDAKRADDQVNGTKEAEEQSKDQPDGREENKVSTKEDKSEPGEQLSKDKSEGTGREGEIVTLPAGIVSQAQKLAMELQETRKSRKSSAPKSSV----ISSFAEIGRTAVDGTDVELRAVCVNGEKTIVGCSNGKLHLVE-QDMKVSFSEEAHKGGVSAMCW-DERIFTGGKDGVVKVWDDD-MKCKAMFDGKGTVQDIERHPLKSVMYCSRGGGFEW--RNVEDGVVIGSAKVDHD--CGAIHPDGLLFATGGKAG-LRMWDLSSLEQVAELKTDG---VTQVAMSEKGYYMVSVGTD 417
            M CA+SG  PKEPV+S KSG +FE+ LIE  +  NG K P TGE L+ +DLL VK+   + P PP  +S+P +L   + EWD L+LE  T Q+ L +TRQEL+TALY+ DA+ RVIARL KE DE +   +R + +G A +AD                                  G+ +  D   G   E + V          ++   +L   RK R  + P+  V    IS F E+  +       +  +V  +GE  +VG ++G   +    + +V    +A  G ++   W  ++  T  ++GV++VW +D  +  A+    G V  +  HP   ++  S G    W   +++   V+   + D D    A HPDG LFA G  AG + ++D  SL   A    +    VT +A +E G+ + +   D
Sbjct:    1 MLCAISGEAPKEPVISTKSGNVFEKRLIEAYITENG-KDPITGEELTLNDLLEVKSPRVVRPRPPTLTSIPSLLTVFQNEWDALALETFTLQQQLTQTRQELSTALYQHDAAVRVIARLIKERDEARDALARLSISGGAPQAD----------------------------------GDAMQVDAEVGLSEEVKTVI---------EETHAKLSAGRKKR--AIPEGWVNADAISEFKEVESSESLYPGTKFISVDGSGELALVGGADGVSGIYSVPNNEVITPLKAEDGAITDGLWRGKQPVTASENGVIRVWSEDGSENTALRSHAGAVVALALHPSGDIL-ASVGVDKTWILHDLKTNKVVAQVRSDEDFSSAAFHPDGHLFAAGTTAGNIVIYDTKSLSIAATFPHNPALPVTSLAFNENGFLLATTLRD 387          
BLAST of Ggra9640.t1 vs. uniprot
Match: A0A0E9N7Z4 (Pre-mRNA-processing factor 19 n=1 Tax=Saitoella complicata (strain BCRC 22490 / CBS 7301 / JCM 7358 / NBRC 10748 / NRRL Y-17804) TaxID=698492 RepID=A0A0E9N7Z4_SAICN)

HSP 1 Score: 154 bits (390), Expect = 1.580e-36
Identity = 125/431 (29.00%), Postives = 209/431 (48.49%), Query Frame = 0
Query:    1 MYCALSGNIPKEPVVSVKSGYLFERALIEKQLAVNGNKCPETGEPLSASDLLPVKNGEHISPLPPEKSSMPHVLDHVRAEWDRLSLELHTSQKLLHETRQELATALYRCDASARVIARLEKECDELKASRGAANGDAKRADDQVNGTKEAEEQSKDQPDGREENKVSTKEDKSEPGEQLSKDKSEGTGREGEIVTLPAGIVSQAQKLAMELQETRKSRKSSAP--KSSVISSFAEIGRTAVDGTDVELRAVCVNGEKTIVGCSNGKLHLVEQDMK--VSFSEEAHKGGVSAMCWDERI-FTGGKDGVVKVWDDDMKCKAMFD-GKGTVQDIERHPLKSVMYC-SRGGGFEWRNVEDGVVIG--SAKVDHDCGAIHPDGLLFATG-GKAGLRMWDLSSLEQVAELKTDG--VTQVAMSEKGYYM-VSVGTDQ 418
            M CALSG +P+ PV+S KSG +FE+ LIE  +A NG K P +GE L+  DL+ VK+ + + P PP  +S+P +L   + EWD L+LE +T ++ L  TRQEL+TALY+ DA+ RV+ARL KE DE + +    N   + A    NG                             G+ +  D+            +PA +V + ++   +L   RK RK  A    + ++++F     T V     +  A+   G   IVG   G  H V  ++K   + +E    G ++   W      T   +G+++ W+ D   +   D   G V  +  HP +  +   ++ G +   +++ G  +   ++  +      HPDG L   G  + G++++D+ + + +A + T+G  +T +  SE GY++ VS  TD+
Sbjct:    3 MVCALSGEVPQFPVISSKSGAVFEKHLIESYIAENG-KDPLSGEALTPEDLIEVKSSKIVRPRPPNVTSIPALLSVFQQEWDALALETYTLREQLATTRQELSTALYQNDAATRVVARLMKERDEARDALAKINISGRPAAS-ANG-----------------------------GDAMDVDEKPAA--------VPASVVKKIEETHGDLSAKRKKRKVPADWTTAEIVAAFETTVSTDVIAPMTKCLALDATGTIAIVG---GGSHAVLLNVKDQATLNELKEAGSIADAVWSGPTPVTAATNGIIRTWNQDGSVEKTIDPDMGQVVSVALHPSRDFLAAVAKNGTWALCDLQSGETVAKITSSDEFTVARFHPDGQLLGVGTSEGGVQIYDVRTGQVMASVNTNGGAITSLHFSENGYWLAVSSATDK 391          
The following BLAST results are available for this feature:
BLAST of Ggra9640.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IYQ57.970e-18454.92Pre-mRNA-processing factor 19 n=1 Tax=Gracilariops... [more]
R7Q9H23.940e-6435.73Pre-mRNA-processing factor 19 n=1 Tax=Chondrus cri... [more]
A0A7S0G9U08.930e-4032.08Pre-mRNA-processing factor 19 (Fragment) n=1 Tax=R... [more]
A0A7S0IDW55.040e-3929.77Pre-mRNA-processing factor 19 n=3 Tax=Micromonas T... [more]
A0A061S8V82.100e-3830.75Pre-mRNA-processing factor 19 n=2 Tax=Tetraselmis ... [more]
cell cycle control protein cwf8 n=1 Tax=Saitoella complicata (strain BCRC 22490 / CBS 7301 / JCM 7358 / NBRC 10748 / NRRL Y-17804) TaxID=698492 RepID=UPI000867509F7.690e-3829.00cell cycle control protein cwf8 n=1 Tax=Saitoella ... [more]
C1MLI63.830e-3729.53Pre-mRNA-processing factor 19 n=1 Tax=Micromonas p... [more]
A0A7S3ELK36.430e-3731.84Pre-mRNA-processing factor 19 n=4 Tax=Rhodosorus m... [more]
A0A3N4IG909.940e-3731.34Pre-mRNA-processing factor 19 n=1 Tax=Ascobolus im... [more]
A0A0E9N7Z41.580e-3629.00Pre-mRNA-processing factor 19 n=1 Tax=Saitoella co... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 109..136
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 134..197
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 134..189
NoneNo IPR availablePANTHERPTHR43995:SF3PRE-MRNA-PROCESSING FACTOR 19 HOMOLOG 2coord: 354..508
coord: 1..127
NoneNo IPR availablePROSITEPS50294WD_REPEATS_REGIONcoord: 278..307
score: 9.151057
NoneNo IPR availableCDDcd16656RING-Ubox_PRP19coord: 2..55
e-value: 1.21549E-22
score: 88.7914
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 1..54
IPR003613U-box domainSMARTSM00504Ubox_2coord: 1..67
e-value: 6.4E-10
score: 49.0
IPR003613U-box domainPROSITEPS51698U_BOXcoord: 1..71
score: 17.516253
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 466..507
e-value: 33.0
score: 7.4
coord: 349..384
e-value: 5.0
score: 12.6
coord: 271..307
e-value: 0.002
score: 27.4
coord: 387..423
e-value: 0.04
score: 23.1
IPR001680WD40 repeatPFAMPF00400WD40coord: 279..307
e-value: 0.025
score: 15.5
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 278..307
score: 10.909469
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10Zinc/RING finger domain, C3HC4 (zinc finger)coord: 1..60
e-value: 5.9E-19
score: 69.4
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 222..507
e-value: 3.7E-30
score: 106.7
IPR013915Pre-mRNA-splicing factor 19PFAMPF08606Prp19coord: 67..128
e-value: 2.7E-19
score: 68.9
IPR038959Pre-mRNA-processing factor 19PANTHERPTHR43995PRE-MRNA-PROCESSING FACTOR 19coord: 354..508
coord: 1..127
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 249..503

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000150_piloncontigtig00000150_pilon:293877..295409 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra9640.t1Ggra9640.t1Gracilaria gracilis GNS1m malemRNAtig00000150_pilon 293877..295409 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra9640.t1 ID=Ggra9640.t1|Name=Ggra9640.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=511bp
MYCALSGNIPKEPVVSVKSGYLFERALIEKQLAVNGNKCPETGEPLSASD
LLPVKNGEHISPLPPEKSSMPHVLDHVRAEWDRLSLELHTSQKLLHETRQ
ELATALYRCDASARVIARLEKECDELKASRGAANGDAKRADDQVNGTKEA
EEQSKDQPDGREENKVSTKEDKSEPGEQLSKDKSEGTGREGEIVTLPAGI
VSQAQKLAMELQETRKSRKSSAPKSSVISSFAEIGRTAVDGTDVELRAVC
VNGEKTIVGCSNGKLHLVEQDMKVSFSEEAHKGGVSAMCWDERIFTGGKD
GVVKVWDDDMKCKAMFDGKGTVQDIERHPLKSVMYCSRGGGFEWRNVEDG
VVIGSAKVDHDCGAIHPDGLLFATGGKAGLRMWDLSSLEQVAELKTDGVT
QVAMSEKGYYMVSVGTDQVLVWDLRKQAVVGSVAMTGACGVALDEFGEYG
CATGAGRVNVFGAKKKAKVVASVETKGGSDARLGIAWGPQSSFVVVGGAD
GVLQKFGAAA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003613Ubox_domain
IPR001680WD40_repeat
IPR013083Znf_RING/FYVE/PHD
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR013915Pre-mRNA_splic_Prp19
IPR038959Prp19
IPR036322WD40_repeat_dom_sf