Ggra9639.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra9639.t1
Unique NameGgra9639.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length335
Homology
BLAST of Ggra9639.t1 vs. uniprot
Match: A0A2V3IXE6 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IXE6_9FLOR)

HSP 1 Score: 309 bits (792), Expect = 6.260e-101
Identity = 193/337 (57.27%), Postives = 227/337 (67.36%), Query Frame = 0
Query:    1 MSEREVIDACLKVVSNRCRNLRKAIDRAKTWEQAAASGQELNPEQMESVKSCVKKEALLAELQEILKKQTTVVESPERADQKQQTSKRSAKAXXXXXXXXXASQVQGESTTSSADGTHRDDDSDLSIPTQEKN-RTRGTTDESSEVPPSSQVLMTEFQALKNDNESLRQELEKLKSTIPAERAKVKKENVRKVLNLFHVVDFLRQPGSREALLSYSQAQTDKAPAYITELDMDLLCYFNVMLTSPNGNVPHDEAVDVSTLHCLEFLQNSNLDAFKDTSYAALNNIVGSIATSPILTDRGRDELPNAALFGD--LHDGLNGNTPGYEVNNAHANVSVP 334
            M++REVIDACLKVVSNRCRNLRKAIDRAKTWEQAAA GQ+LN EQ+ESVKSCVKKEALLAELQEILKKQT++VE PE+ +            XXXXXXXXX                        ++ T  ++ ++   + ESS                         ELE LK +   E+  +KKENVRKVLNLFH+VDFLRQ GSREAL  Y+ +  +    ++TELDMDLLCYFNVMLTSPNGNVPH+EAVDVSTLHCLEFLQNS LDAFKDTSY AL  IV  I++ PILT+RG DE   AAL  +  +HDG NGN P +EV +A ANV++P
Sbjct:    1 MADREVIDACLKVVSNRCRNLRKAIDRAKTWEQAAAKGQDLNAEQLESVKSCVKKEALLAELQEILKKQTSIVERPEQQEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKALTTSPRDAKSPDYSKESSAXXXXXXXXXXXXXXXXXXXXXXXXELEDLKESKATEQNGMKKENVRKVLNLFHIVDFLRQQGSREALHGYAASHPETIGNFVTELDMDLLCYFNVMLTSPNGNVPHNEAVDVSTLHCLEFLQNSQLDAFKDTSYEALTRIVDKISSCPILTERGLDERAKAALQSEKFVHDGTNGNGPAHEVTDARANVAIP 337          
BLAST of Ggra9639.t1 vs. uniprot
Match: R7QCM9 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QCM9_CHOCR)

HSP 1 Score: 223 bits (569), Expect = 5.050e-66
Identity = 143/315 (45.40%), Postives = 195/315 (61.90%), Query Frame = 0
Query:    1 MSEREVIDACLKVVSNRCRNLRKAIDRAKTWEQAAASGQELNPEQMESVKSCVKKEALLAELQEILKKQTTVVESPERADQKQQTSKRSAKAXXXXXXXXXAS-----QVQGESTTS--SADGTHRDDDSDLSIPTQEKN---RTRGTTDESSEVPPSSQ------VLMTEFQALKNDNESLRQELEKLKSTIPAERAKVKKENVRKVLNLFHVVDFLRQPGSREALLSYSQAQTDK-APAYITELDMDLLCYFNVMLTSPNGNVPHDEAVDVSTLHCLEFLQNSNLDAFKDTSYAALNNIVGSIATSPILTDRG 298
            MS ++  D+ L++VSN+CRNLRKAIDRA+T E A   G +LN EQ ESV+   +KEALL ELQEILKKQT V+E  +   ++ + +K++A+A          S       +GE +     A+   R D S+ + P    N   +   + DE+ +    ++      +L  + + +  + ++L +E+ +LK +   + A+ KK+ +   LNLFHV DFLRQPGSREALLSY      K +P  +  L +D +CYFNVMLTSPNGNVPH EAVDVST HCLE+LQ S  DAF  TSYAAL  IV +IA+ PILTDRG
Sbjct:   85 MSSKDQTDSLLRIVSNKCRNLRKAIDRARTQEAAEKRGDQLNDEQRESVRGLGRKEALLVELQEILKKQTAVLEPQQPETKQSRRAKKAARAKAREGKGSSKSISEKSSEEGERSEKVPEAESGARPDGSETAHPNGNGNPAGKGEPSADEARKAERGAEQLAELEILRKQSEEMSKERDALLKEMAELKLSHEHQLAQDKKKAIASTLNLFHVADFLRQPGSREALLSYYATPEGKTSPLVLNGLHLDPVCYFNVMLTSPNGNVPHPEAVDVSTAHCLEYLQGSTTDAFIGTSYAALVEIVDTIASCPILTDRG 399          
BLAST of Ggra9639.t1 vs. uniprot
Match: M2X619 (Uncharacterized protein n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2X619_GALSU)

HSP 1 Score: 74.7 bits (182), Expect = 4.040e-11
Identity = 40/117 (34.19%), Postives = 67/117 (57.26%), Query Frame = 0
Query:  189 VRKVLNLFHVVDFL-RQPGSREALLSYSQAQTDKAPAYITELDMDLLCYFNVMLTSPNGNVPHDEAVDVSTLHCLEFLQNSNLDAFKDTSYAALNNIVGSIATSPILTDRGRDELPN 304
            V+ +L + HV DF+  +P + E ++  +          ++ + MD + YF  MLTSP+G++P + A+ VST H +E+LQ S  +A    SY  L+ I+ +IA+ P+L  RG +   N
Sbjct:  144 VQNILTILHVSDFIVNEPEAVETIVKENLELPQGKFGKLSRVHMDSVNYFAKMLTSPDGDIPIERALLVSTYHAMEYLQRSKKEAIPGISYEFLHEIISTIASHPLLVFRGVNNSSN 260          
BLAST of Ggra9639.t1 vs. uniprot
Match: A0A7S0BHY7 (Hypothetical protein (Fragment) n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0BHY7_9RHOD)

HSP 1 Score: 63.5 bits (153), Expect = 5.690e-8
Identity = 66/265 (24.91%), Postives = 117/265 (44.15%), Query Frame = 0
Query:   10 CLKVVSNRCRNLRKAIDRAKTWEQAAASGQELNPEQMESVKSCVKKEALLAELQEILKKQTTVVESPERADQKQQTSKRSAKAXXXXXXXXXASQVQGESTTSSADGTHRDDDSDLSIPTQEKNRTRGTTDESSEVPPSSQVLMTEFQALKNDNESLRQELEKLKSTI---PAERAKVKKENVRKVLNLFHVVD-FLRQPGSREALLSYSQ--AQTDKAPAYITELDMDLLCYFNVMLTSPNGNVPHDEAVDVSTLHCLEFLQNS 268
            C K++ N+ RNL+KAI++    E+A   G+ LN +Q+ESV++   K       +E+ KKQT V +  E+   +Q+                                   +D   LS P +++        E+   P   +       +   D  S+  E       +   P    K  +E  +++LNL HV D F  +  + +A+L + +   +   + +  +E D+  + YF +MLT+P+G VP +EAV VS+ H   +++ S
Sbjct:   20 CSKILLNKLRNLKKAIEKVHHLEEALQRGETLNDQQLESVRTKELKXXXXXXXEEVHKKQTVVFKK-EKDTVRQKLF---------------------------------EDFKQLSAPEKKEEEVTKPEVEAETAPEPEEPAKEVATSTTQDAHSVESEQAAASYPVQPRPQPEEKTGQEVTQELLNLLHVADRFNHEKETVKAVLEHFERNGKPGLSESTCSEQDLKAITYFAMMLTTPDGVVPLNEAVRVSSFHAENYIKRS 250          
BLAST of Ggra9639.t1 vs. uniprot
Match: A0A7S2ZG09 (Hypothetical protein n=3 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZG09_9RHOD)

HSP 1 Score: 60.1 bits (144), Expect = 2.330e-6
Identity = 37/118 (31.36%), Postives = 66/118 (55.93%), Query Frame = 0
Query:  187 ENVRKVLNLFHVVDFLR-QPGSREALLSYSQAQTDKAPAYIT--ELDMDLLCYFNVMLTSPNGNVPHDEAVDVSTLHCLEFLQNSNLDAFKDTSYAALNNIVGSIATSPILTDRGRDE 301
            E  +++LNL HV D +  +  + +A+L   +       +  T  E D+  + YF +MLT+P+G VP +EAV VS+ H   +++ S  DAF   +Y +L ++V  ++ +  L +R + E
Sbjct:  166 EVTQELLNLLHVADRINHEKETVKAVLEDFERNGKPGLSENTCSEQDLKAITYFAMMLTTPDGVVPLNEAVRVSSFHAENYIKRSAEDAFPGCTYESLASLVSQVSDTDTLQNRNQQE 283          
The following BLAST results are available for this feature:
BLAST of Ggra9639.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A2V3IXE66.260e-10157.27Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QCM95.050e-6645.40Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
M2X6194.040e-1134.19Uncharacterized protein n=1 Tax=Galdieria sulphura... [more]
A0A7S0BHY75.690e-824.91Hypothetical protein (Fragment) n=1 Tax=Rhodosorus... [more]
A0A7S2ZG092.330e-631.36Hypothetical protein n=3 Tax=Rhodosorus marinus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 149..183
NoneNo IPR availableGENE3D6.10.250.2730coord: 143..194
e-value: 3.4E-5
score: 25.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 76..150
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 76..103
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 114..139

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000150_piloncontigtig00000150_pilon:292327..293331 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra9639.t1Ggra9639.t1Gracilaria gracilis GNS1m malemRNAtig00000150_pilon 292327..293331 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra9639.t1 ID=Ggra9639.t1|Name=Ggra9639.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=335bp
MSEREVIDACLKVVSNRCRNLRKAIDRAKTWEQAAASGQELNPEQMESVK
SCVKKEALLAELQEILKKQTTVVESPERADQKQQTSKRSAKAAKAKEKRA
KASQVQGESTTSSADGTHRDDDSDLSIPTQEKNRTRGTTDESSEVPPSSQ
VLMTEFQALKNDNESLRQELEKLKSTIPAERAKVKKENVRKVLNLFHVVD
FLRQPGSREALLSYSQAQTDKAPAYITELDMDLLCYFNVMLTSPNGNVPH
DEAVDVSTLHCLEFLQNSNLDAFKDTSYAALNNIVGSIATSPILTDRGRD
ELPNAALFGDLHDGLNGNTPGYEVNNAHANVSVP*
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