Ggra9502.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra9502.t1
Unique NameGgra9502.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length169
Homology
BLAST of Ggra9502.t1 vs. uniprot
Match: R7QLD7 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QLD7_CHOCR)

HSP 1 Score: 203 bits (516), Expect = 7.390e-64
Identity = 95/164 (57.93%), Postives = 123/164 (75.00%), Query Frame = 0
Query:    5 ENREFYYQTGLSGKRYSEIWAALSGTRKRRQRVEDCDSEWFNKPIPGNQLITELEHELSAINRVYLHVVGQTVFSLDDDHQRLRSRAVTELTNLSHVNNTQKALGPVNNALCSALTSGFISSHYSRPGEKLIHVLERLVQLFQGAATPGSIKPMTEAIFAADRG 168
            + + F ++  +SG RY E+W+ALSGT+++R+  E  +  W NKP+ GN LIT +E EL+AINR  +HV G T++S+DDDH RL SRAV  LTNLS V N +KALGPVNNA CSALT  FI+SHYSRP EK+ HV  RLVQL QG  T G+++PM ++IFA+DRG
Sbjct:   12 KTKHFSFRCKISGSRYKEVWSALSGTKRKREGFEQSECGWLNKPVAGNALITYMEGELAAINRRLVHVEGVTIYSVDDDHNRLSSRAVLHLTNLSQVTNPKKALGPVNNAACSALTHAFIASHYSRPHEKITHVWHRLVQLIQGVPTVGALRPMVDSIFASDRG 175          
BLAST of Ggra9502.t1 vs. uniprot
Match: R7QKF5 (Uncharacterized protein n=2 Tax=Chondrus crispus TaxID=2769 RepID=R7QKF5_CHOCR)

HSP 1 Score: 167 bits (422), Expect = 9.680e-45
Identity = 81/161 (50.31%), Postives = 111/161 (68.94%), Query Frame = 0
Query:    8 EFYYQTGLSGKRYSEIWAALSGTRKRRQRVEDCDSEWFNKPIPGNQLITELEHELSAINRVYLHVVGQTVFSLDDDHQRLRSRAVTELTNLSHVNNTQKALGPVNNALCSALTSGFISSHYSRPGEKLIHVLERLVQLFQGAATPGSIKPMTEAIFAADRG 168
            +F++  GLS  RY ++W+AL+G R++R  V+   + W         LIT++E E++A+NR  L++ G TV SLDDDH R+ SRAV+ L+ L   NN +K LGPV N L SALTS F + H++R GEKL+H  ERL  L QGA+T G++KPM +AIFAADRG
Sbjct:  313 DFFFHMGLSAARYRQVWSALTGCREKRTAVDYSTTGWCRTASRTTSLITDIESEVAAVNRELLYIPGATVLSLDDDHLRMASRAVSSLSFLQQHNNPKKGLGPVGNTLGSALTSVFFACHFTRRGEKLLHTWERLAPLLQGASTTGALKPMADAIFAADRG 473          
BLAST of Ggra9502.t1 vs. uniprot
Match: A0A2V3IV24 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IV24_9FLOR)

HSP 1 Score: 75.9 bits (185), Expect = 8.260e-15
Identity = 34/55 (61.82%), Postives = 41/55 (74.55%), Query Frame = 0
Query:    1 MTSPENREFYYQTGLSGKRYSEIWAALSGTRKRRQRVE---DCDSEWFNKPIPGN 52
            MT  E+ EFYYQTG+ GKRY+EIWAAL GT+KR QR E   + +  WFNKP+ GN
Sbjct:   57 MTYTESEEFYYQTGILGKRYAEIWAALRGTKKRPQRAEVYGNSEKGWFNKPVVGN 111          
BLAST of Ggra9502.t1 vs. uniprot
Match: R7Q906 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q906_CHOCR)

HSP 1 Score: 72.8 bits (177), Expect = 7.280e-14
Identity = 36/67 (53.73%), Postives = 48/67 (71.64%), Query Frame = 0
Query:   57 ELEHELSAINRVYLHVVGQTVFSLDDDHQRLRSRAVTELTNLSHVNNTQKALGPVNNALCSALTSGF 123
            E+E E +AINR  L++   TVFSLDDDH R+   A+  LT+L  +NN +K+LGP++NALCSAL   F
Sbjct:    2 EIESETAAINRELLYIPNATVFSLDDDHLRMAFSALVVLTHLRQLNNQKKSLGPLDNALCSALNPFF 68          
The following BLAST results are available for this feature:
BLAST of Ggra9502.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
R7QLD77.390e-6457.93Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
R7QKF59.680e-4550.31Uncharacterized protein n=2 Tax=Chondrus crispus T... [more]
A0A2V3IV248.260e-1561.82Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7Q9067.280e-1453.73Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000873_piloncontigtig00000873_pilon:329621..330127 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra9502.t1Ggra9502.t1Gracilaria gracilis GNS1m malemRNAtig00000873_pilon 329621..330127 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra9502.t1 ID=Ggra9502.t1|Name=Ggra9502.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=169bp
MTSPENREFYYQTGLSGKRYSEIWAALSGTRKRRQRVEDCDSEWFNKPIP
GNQLITELEHELSAINRVYLHVVGQTVFSLDDDHQRLRSRAVTELTNLSH
VNNTQKALGPVNNALCSALTSGFISSHYSRPGEKLIHVLERLVQLFQGAA
TPGSIKPMTEAIFAADRG*
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