Ggra9393.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra9393.t1
Unique NameGgra9393.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length177
Homology
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BLAST of Ggra9393.t1 vs. uniprot
Match: A0A2V3ISQ3 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ISQ3_9FLOR)

HSP 1 Score: 194 bits (492), Expect = 3.320e-60
Identity = 111/181 (61.33%), Postives = 138/181 (76.24%), Query Frame = 0 
Query:    1 MSSEEISVAKLTINDEELEELLDAVDSRTQQQQVFHDLMSDGFLSLARERYRDPLSTERLGRLVYDLREDVTSSFQIDVQEDEKSGVVSMSRT----IADSNSTSTTAGSTLRRRRTNEGTKTSNATEKKVK-ARPDVANSFVAIPSSEVREAIRCFKLAIDQAVELVNTNSKLVATMDNQ 176
            M+SE+  +  L+I DE LEELLDAVD RT QQ +FH+L+SDGF+SLARERYRDP STERLGRLVYD REDV+S   IDVQED+ SG+V+M++T    +    S ST A  TLRRRRT E  K  N+ EK VK +  +V N+F+A+PS E+REAI+CF+LAID AV+LVNTNSKL A +D +
Sbjct:    1 MTSEDTGIENLSIRDEGLEELLDAVDRRTHQQDIFHNLISDGFMSLARERYRDPSSTERLGRLVYDEREDVSSDVHIDVQEDQDSGIVAMTKTNGQDVTGPESNSTEA--TLRRRRTKESEKVRNSREKPVKLSHKNVKNTFMAMPSKEIREAIKCFRLAIDHAVDLVNTNSKLNAALDKK 179
The following BLAST results are available for this feature:
BLAST of Ggra9393.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3ISQ33.320e-6061.33Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 92..123
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 92..110
IPR040357Vma22/CCDC115PANTHERPTHR31996COILED-COIL DOMAIN-CONTAINING PROTEIN 115coord: 11..172

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000883_piloncontigtig00000883_pilon:299911..300537 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra9393.t1Ggra9393.t1Gracilaria gracilis GNS1m malemRNAtig00000883_pilon 299911..300537 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra9393.t1 ID=Ggra9393.t1|Name=Ggra9393.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=177bp
MSSEEISVAKLTINDEELEELLDAVDSRTQQQQVFHDLMSDGFLSLARER
YRDPLSTERLGRLVYDLREDVTSSFQIDVQEDEKSGVVSMSRTIADSNST
STTAGSTLRRRRTNEGTKTSNATEKKVKARPDVANSFVAIPSSEVREAIR
CFKLAIDQAVELVNTNSKLVATMDNQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR040357Vma22/CCDC115