Ggra9343.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra9343.t1
Unique NameGgra9343.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length161
Homology
BLAST of Ggra9343.t1 vs. uniprot
Match: A0A2V3IV99 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IV99_9FLOR)

HSP 1 Score: 95.9 bits (237), Expect = 2.400e-22
Identity = 57/139 (41.01%), Postives = 72/139 (51.80%), Query Frame = 0
Query:   24 DVINLVSDDDRTPVRRPRPVKPCAELQIVAEQLTYTETTTSDASRRRARS----RPPLLGVDANQQVVTNFEPGTTDKDVCLLQHVERFDPVKHYVHPRPACGTFAFADDS---RKFCSKCYCLVCEIPAAECPSWDVH 155
            +VINL+SDDD+TPVRRPRPV    EL+IV E + YT     D  +R + S    R PL  +  ++    +        +V L+   E   P+K Y H RP C    F       R+ C  CYC VCEIPAAEC  W  H
Sbjct:    6 EVINLISDDDQTPVRRPRPVPATEELEIVHEHIRYT-----DPKQRISSSEFWIRSPLRTICDSK---LSSRQNVNGNEVQLVVEREVLKPLKDYPHARPHCLAHPFGKKGVHRRRHCDNCYCCVCEIPAAECKKWKEH 136          
BLAST of Ggra9343.t1 vs. uniprot
Match: A0A448ZL92 (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZL92_9STRA)

HSP 1 Score: 58.5 bits (140), Expect = 5.060e-7
Identity = 24/50 (48.00%), Postives = 31/50 (62.00%), Query Frame = 0
Query:  109 DPVKHYVHPRPACGTFAFADDSRKFCSKCYCLVCEIPAAECPSWDVHRAI 158
            +P   Y H R  CG   F  D +KFC KCYC+VC+IPA+EC  W  H ++
Sbjct:  229 NPNIQYPHKRTDCGLHDFQADPQKFCRKCYCVVCDIPASECTYWKDHCSL 278          
BLAST of Ggra9343.t1 vs. uniprot
Match: A0A1E7FKG8 (DNA helicase n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FKG8_9STRA)

HSP 1 Score: 56.6 bits (135), Expect = 2.470e-6
Identity = 26/57 (45.61%), Postives = 33/57 (57.89%), Query Frame = 0
Query:  114 YVHPRPACGTFAF---------ADDSRK--FCSKCYCLVCEIPAAECPSWDVHRAIE 159
            Y H RP CG ++F          +DS K  FC KCYC+VC+IPA +C  W+ H  IE
Sbjct:  190 YPHIRPLCGVYSFDGGSGDDKGTEDSNKVKFCDKCYCVVCDIPAKDCTQWNDHYIIE 246          
BLAST of Ggra9343.t1 vs. uniprot
Match: A0A448ZBD0 (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZBD0_9STRA)

HSP 1 Score: 55.8 bits (133), Expect = 4.230e-6
Identity = 34/121 (28.10%), Postives = 55/121 (45.45%), Query Frame = 0
Query:   36 PVRRPRPVKPCAELQIVAEQLTYTETTTSDASR----RRARSRPPLLGVDANQQVVTNFEPGTTDKDVCLLQHVERFDPVKHYVHPRPACGTFAFADDSRKFCSKCYCLVCEIPAAECPSW 152
            P+RR  P    A L  +       +T    A++    R+   RP      A  +       G  D  + +L+     +P+  + H R  C  FAFA++  +FC KC+C +C++PA+ CP W
Sbjct:   34 PLRRRPPAAVFATLDTLVPDEHLPQTIPHAANKTDHDRKXLCRPVEPSFAARDR-------GDDDDILEILETRRGNNPLLDFPHRREDCLKFAFAENPCRFCPKCFCYICDVPASACPEW 147          
The following BLAST results are available for this feature:
BLAST of Ggra9343.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A2V3IV992.400e-2241.01Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A448ZL925.060e-748.00Uncharacterized protein n=1 Tax=Pseudo-nitzschia m... [more]
A0A1E7FKG82.470e-645.61DNA helicase n=1 Tax=Fragilariopsis cylindrus CCMP... [more]
A0A448ZBD04.230e-628.10Uncharacterized protein n=1 Tax=Pseudo-nitzschia m... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..37

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000883_piloncontigtig00000883_pilon:37394..37876 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra9343.t1Ggra9343.t1Gracilaria gracilis GNS1m malemRNAtig00000883_pilon 37394..37876 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra9343.t1 ID=Ggra9343.t1|Name=Ggra9343.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=161bp
MQAAQQEIPLPDAARHAASPPKVDVINLVSDDDRTPVRRPRPVKPCAELQ
IVAEQLTYTETTTSDASRRRARSRPPLLGVDANQQVVTNFEPGTTDKDVC
LLQHVERFDPVKHYVHPRPACGTFAFADDSRKFCSKCYCLVCEIPAAECP
SWDVHRAIEF*
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