Ggra9314.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra9314.t1
Unique NameGgra9314.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length612
Homology
BLAST of Ggra9314.t1 vs. uniprot
Match: A0A2V3IF51 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IF51_9FLOR)

HSP 1 Score: 130 bits (326), Expect = 2.540e-32
Identity = 65/105 (61.90%), Postives = 82/105 (78.10%), Query Frame = 0
Query:  319 LMISKFNSNARQLQVQSMLKTMRIEKIMSEHEITSHSEDLKKLVSVIEELSPLCPPDFRSEAHKIAFLRNAVLGTSWANTPISNIVTLKYSFNAFITALREHLQL 423
            ++++++NSNARQLQV S+LKT+RIEK MSE+EIT+ SE L K++S++EELSP C P F  EAHK  +LR+A  G SWA  PI NIV   Y+FN FITALRE LQL
Sbjct:    1 MVLTEYNSNARQLQVYSILKTLRIEKSMSENEITTSSEGLTKVLSIVEELSPQCRPHFWCEAHKFGYLRDAFRGLSWAKLPIGNIVPSNYTFNGFITALREGLQL 105          
BLAST of Ggra9314.t1 vs. uniprot
Match: A0A1X6NZP0 (CCHC-type domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NZP0_PORUM)

HSP 1 Score: 94.7 bits (234), Expect = 8.850e-17
Identity = 58/202 (28.71%), Postives = 107/202 (52.97%), Query Frame = 0
Query:  231 GSHGNRFGSSDDTRKASYVFQQFRDN--RFTGDIKQSIEMTLRDYNVCAHQHRLSPAQKADYFVNVLDGPARTFFFNNAKDGMT-FEDMASLMISKFNSNARQLQVQSMLKTMRIEKIMSEHEITSHSEDLKKLVSVIEELSPLCPPDFRSEAHKIAFLRNAVLGTSWANTPISNIVTLKYSFNAFITALREHLQLEDEIKE 429
            G   N  G++   R A  +  +F+D   +F+G + ++    + DY   +  + L+ +QK  +  N+L G A+ F+  N +   T F     L+ +++NS  RQ +V++ L T R+  ++++ +  + +  L++    I +L+P+ P   + +AH++ FLR+AV+G  WAN P+S + T   SF      L   LQL  E K+
Sbjct:  154 GGSSNMGGTNPPDRLAHNLAMRFKDKAAKFSGGLGEAWMEYVADYQQVSRDYNLTSSQKLQFLHNLLAGDAKRFYLENVQAFATSFNQAVELVSTEYNSVVRQSRVKNDLSTFRMSTLVAQGKTETFA--LEQTYKNIMKLAPMVPRSHQGDAHRVDFLRHAVVGYPWANEPLSRVPTHNLSFQQLYGELEAALQLHGEAKQ 353          
BLAST of Ggra9314.t1 vs. uniprot
Match: A0A2V3IHV0 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IHV0_9FLOR)

HSP 1 Score: 83.6 bits (205), Expect = 6.230e-16
Identity = 44/96 (45.83%), Postives = 60/96 (62.50%), Query Frame = 0
Query:  519 MKNGETAVHIISDMVLAMEGEISENVE--DGTDVNGNTNGTFNVEEVCLFDELTSKDISTAREVEMADQEWYTNHLPASLGSSDMCSRAADQ-DFC 611
            M NGE+A HIISD+VL +EGE+S+ V   +G D N  T+   N EE+C+FDELT  +   A  +E AD+EWY NH   ++      S  +D+ DFC
Sbjct:    1 MSNGESATHIISDLVLTIEGEVSDGVSAVEGADPNFETD--HNTEEICIFDELTKDEKILAEYMERADKEWYINHFSVAMSKDQYPSNLSDEKDFC 94          
BLAST of Ggra9314.t1 vs. uniprot
Match: A0A2V3IIY8 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IIY8_9FLOR)

HSP 1 Score: 78.2 bits (191), Expect = 4.610e-14
Identity = 47/94 (50.00%), Postives = 63/94 (67.02%), Query Frame = 0
Query:  519 MKNGETAVHIISDMVLAMEGEISENVEDGTDVNGNTNGT-FNVEEVCLFDELTSKDISTA-REVEMADQEWYTNHLPASLGSSDMCSRAADQDF 610
            M +GE+AVHI+SD+VLAMEGE  E V D  D + + +G  ++VEEV LFD+LT  D   A R VE AD++W+TNH+ A++G   M    A Q F
Sbjct:    1 MTSGESAVHIVSDLVLAMEGETDE-VSDRNDGDDDQHGPCYDVEEVRLFDQLTGGDEPLATRAVEKADEDWFTNHVAATMGQERM--HPASQSF 91          
BLAST of Ggra9314.t1 vs. uniprot
Match: R7QE19 (Integrase catalytic domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QE19_CHOCR)

HSP 1 Score: 87.0 bits (214), Expect = 5.590e-14
Identity = 59/216 (27.31%), Postives = 108/216 (50.00%), Query Frame = 0
Query:  254 RDNRFTGDIKQSIEMTLRDYNVCAHQHRLSPAQKADYFVNVLDGPARTFFFNNAKDGMT-FEDMASLMISKFNSNARQLQVQSMLKTMRIEKIMSEHEITSHSEDLKKLVSVIEELSPLCPPDFRSEAHKIAFLRNAVLGTSWANTPISNIVTLKYSFNAFITALREHLQLEDEIK--------EVNSSSMTHIVGEETLFQQYGR---NPKYVRK 457
            ++ +F+GD+ +S    + DY   +  + LSP Q+  +  N+L G A+ ++ +      T F+    ++  ++NS  RQ +V++ L ++R+    +E +  S +  L     +I   S   P   + +AHK+ FLRNAV+G  W++ P+S + T + +F    + L   LQL+ E K        ++N  S++H      L+   GR   N  Y R+
Sbjct:  188 KEKKFSGDLGESWMEYVDDYLQISRDYNLSPPQRLQFLHNLLRGDAKRYYLDKIDGYATSFQQAIQMLEEEYNSPVRQTRVKNYLNSLRVTVFAAEGKEMSAALALTYKSIII--FSRQGPRSHQGDAHKVEFLRNAVVGMPWSSEPLSRVATHQLTFQQLYSELEAALQLDKESKIAIIRDHAQLNQRSVSHDSWAGILYTGQGRYYNNSPYPRE 401          
BLAST of Ggra9314.t1 vs. uniprot
Match: A0A2V3ICA2 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ICA2_9FLOR)

HSP 1 Score: 74.3 bits (181), Expect = 1.070e-12
Identity = 38/90 (42.22%), Postives = 54/90 (60.00%), Query Frame = 0
Query:  519 MKNGETAVHIISDMVLAMEGEISENVEDGTDVNGNTNGTFNVEEVCLFDELTSKDISTAREVEMADQEWYTNHLPASLGSSDMCSRAADQ 608
            M NG++AV I+SD+VL ME E+S+                N EE+C+FDELT K ++ A  +E AD+EWYTNH  A++G     S  +D+
Sbjct:    1 MTNGDSAVRIVSDLVLTMEREVSDATHSTDGAEPGVEIYHNTEEICIFDELT-KLMNLAENMERADEEWYTNHFSAAMGRDPYLSDLSDK 89          
BLAST of Ggra9314.t1 vs. uniprot
Match: A0A1X6PHH9 (Uncharacterized protein n=3 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6PHH9_PORUM)

HSP 1 Score: 67.0 bits (162), Expect = 6.060e-8
Identity = 48/186 (25.81%), Postives = 85/186 (45.70%), Query Frame = 0
Query:  244 RKASYVFQQFRDNR--FTGDIKQSIEMTLRDYNVCAHQHRLSPAQKADYFVNVLDGPARTFFFNNAKD-GMTFEDMASLMISKFNSNARQLQVQSMLKTMRIEKIMSEHEITSHSEDLKKLVSVIEELSPLCPPDFRSEAHKIAFLRNAVLGTSWANTPISNIVTLKYSFNAFITALREHLQLEDE 426
            + A  V  +F+D R  F G   Q     +  YN+    + L P  K  +  N+L G A+ F  +       T+ED    +  +++   +Q Q+++ L  +R+  ++ +      +  L ++   +   S + P  ++ + H++AFLR AV+G +WA  P+S I T   SF      L   L L  E
Sbjct:  212 KAARDVSVRFKDERAKFGGTKDQWWPDFVSTYNLVCRDYALPPRLKLQFLHNLLTGAAKVFLLDKVLPVASTYEDAVDHVHREYHPVVQQEQMKNDLSNLRLSYLVGKGMTVDLA--LVQVYKRVSSRSRMDPAAYQGKEHRVAFLRGAVIGCTWAAEPLSRIATHNLSFQQLYAELSSSLSLSRE 395          
BLAST of Ggra9314.t1 vs. uniprot
Match: A0A1X6PET3 (Integrase catalytic domain-containing protein n=2 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6PET3_PORUM)

HSP 1 Score: 63.9 bits (154), Expect = 8.150e-7
Identity = 43/144 (29.86%), Postives = 71/144 (49.31%), Query Frame = 0
Query:  287 KADYFVNVLDGPARTFFFNNAKDGMT-FEDMASLMISKFNSNARQLQVQSMLKTMRIEKIMSEHEITSHSEDLKKLVSVIEELSPLCPPDFRSEAHKIAFLRNAVLGTSWANTPISNIVTLKYSFNAFITALREHLQLEDEIKE 429
            +A +  N+L G A+ F+  N +   T F     L+ + +NS  RQ +V++ L T R+  +    E T  +         I +L+P+ P   + +AH++ FLR+AV+G + AN P+  + T    F      L   LQL  E K+
Sbjct:   39 EAPFLHNLLYGDAKHFYLENVQAFATSFNQAVELVSTDYNSVVRQSRVKNYLSTFRMSTLTVALEHTYRN---------IMKLAPMVPRSHQGDAHRVDFLRHAVVGYTSANEPLRRVQTHNLPFQQLYGELEAALQLHGEAKQ 173          
The following BLAST results are available for this feature:
BLAST of Ggra9314.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
A0A2V3IF512.540e-3261.90Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A1X6NZP08.850e-1728.71CCHC-type domain-containing protein n=1 Tax=Porphy... [more]
A0A2V3IHV06.230e-1645.83Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IIY84.610e-1450.00Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QE195.590e-1427.31Integrase catalytic domain-containing protein n=1 ... [more]
A0A2V3ICA21.070e-1242.22Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A1X6PHH96.060e-825.81Uncharacterized protein n=3 Tax=Porphyra umbilical... [more]
A0A1X6PET38.150e-729.86Integrase catalytic domain-containing protein n=2 ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 197..241
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 208..241

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000863_piloncontigtig00000863_pilon:576715..578550 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra9314.t1Ggra9314.t1Gracilaria gracilis GNS1m malemRNAtig00000863_pilon 576715..578550 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra9314.t1 ID=Ggra9314.t1|Name=Ggra9314.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=612bp
MASSTSSRTAAFDDRLKKSVERFQSTPETGMLLRDAASYILEMYPVYDSS
ESTITLTSAKRAEVEAALKGFLPAPESILDPSLFLFPLFPILLVRETAML
YELGDVPEGLYTTLQVSNRETANESLVTYVWFMNFIDASRETMHIGVELS
RRSSSASRLSAAIRHATSGQQPYQMHMQVPEVLPSSQHVQAAAPMETAPP
AASVAVHSHYDDTQNRNQNFDSRQTPQQSMGSHGNRFGSSDDTRKASYVF
QQFRDNRFTGDIKQSIEMTLRDYNVCAHQHRLSPAQKADYFVNVLDGPAR
TFFFNNAKDGMTFEDMASLMISKFNSNARQLQVQSMLKTMRIEKIMSEHE
ITSHSEDLKKLVSVIEELSPLCPPDFRSEAHKIAFLRNAVLGTSWANTPI
SNIVTLKYSFNAFITALREHLQLEDEIKEVNSSSMTHIVGEETLFQQYGR
NPKYVRKHPPRWSTNDTGRDDWNSSRLGTKALSFEESRRRNECHKCRSQW
KPGHRCQPGAIRNHIRQRMKNGETAVHIISDMVLAMEGEISENVEDGTDV
NGNTNGTFNVEEVCLFDELTSKDISTAREVEMADQEWYTNHLPASLGSSD
MCSRAADQDFC*
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