Ggra9182.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra9182.t1
Unique NameGgra9182.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length231
Homology
[Close]
BLAST of Ggra9182.t1 vs. uniprot
Match: A0A2V3IP93 (GOLD domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IP93_9FLOR)

HSP 1 Score: 215 bits (547), Expect = 6.470e-67
Identity = 116/222 (52.25%), Postives = 153/222 (68.92%), Query Frame = 0 
Query:   10 FMLLLLCCRCDALRFYIHDRERRCFQFEAPYGARVLGHRSIANGKGQAQLSLDIKSTTGTRVYESHSGDPKDAMFSFVTPPYHSSDEHYEQYDYEMDDQMATFDACVMLTYDQTMHAAQHGKRAVTFWVQLDHRAVKSDV--HATTEGVTRITHSLSQMHSTLNMLLADLAALKMREQRLVKRTQRMALSLRNFAVLSIMVLMTVSYFQFKHYKKLFTAKKI 229
            F++ LL   C  +RFY++DRERRCF FEA +G RVLGHRSIA+G+GQA+LSL+IK+  G  VYESHSGD KD+MFSF+TP +  + +HYE Y+YEM+D  A F AC+ L++  +MH A   KRAVTFWV++D R        HAT   + R+  SL QM +TL  +  DL  L+ RE+RLVKR +  A  L+ FA + + VL+  S  Q+ HYKKLF AKK+
Sbjct:   14 FVIALLIQSCGGVRFYLNDRERRCFNFEAQHGVRVLGHRSIAHGRGQAELSLEIKAANGKVVYESHSGDAKDSMFSFITPAF-DAPQHYEDYEYEMEDPHAVFAACLTLSFHASMHTANE-KRAVTFWVEVDARGSGESAQGHATGGSMIRVQQSLRQMQNTLKTVAIDLTHLQARERRLVKRNKATAERLKLFAGVCLTVLIATSSLQYMHYKKLFKAKKL 233
The following BLAST results are available for this feature:
BLAST of Ggra9182.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IP936.470e-6752.25GOLD domain-containing protein n=1 Tax=Gracilariop... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009038GOLD domainSMARTSM01190EMP24_GP25L_2coord: 21..225
e-value: 5.7E-10
score: 49.1
IPR009038GOLD domainPFAMPF01105EMP24_GP25Lcoord: 21..224
e-value: 7.5E-18
score: 65.1
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 22..197
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 6..17
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 198..217
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..5
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 18..21
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 218..230
NoneNo IPR availableTMHMMTMhelixcoord: 195..217
NoneNo IPR availableTMHMMTMhelixcoord: 4..26

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000075_piloncontigtig00000075_pilon:315785..316477 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra9182.t1Ggra9182.t1Gracilaria gracilis GNS1m malemRNAtig00000075_pilon 315785..316477 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra9182.t1 ID=Ggra9182.t1|Name=Ggra9182.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=231bp
MGAHSFIALFMLLLLCCRCDALRFYIHDRERRCFQFEAPYGARVLGHRSI
ANGKGQAQLSLDIKSTTGTRVYESHSGDPKDAMFSFVTPPYHSSDEHYEQ
YDYEMDDQMATFDACVMLTYDQTMHAAQHGKRAVTFWVQLDHRAVKSDVH
ATTEGVTRITHSLSQMHSTLNMLLADLAALKMREQRLVKRTQRMALSLRN
FAVLSIMVLMTVSYFQFKHYKKLFTAKKII*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009038GOLD_dom