Ggra9153.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra9153.t1
Unique NameGgra9153.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length881
Homology
BLAST of Ggra9153.t1 vs. uniprot
Match: R7QKF5 (Uncharacterized protein n=2 Tax=Chondrus crispus TaxID=2769 RepID=R7QKF5_CHOCR)

HSP 1 Score: 407 bits (1046), Expect = 4.330e-121
Identity = 275/827 (33.25%), Postives = 395/827 (47.76%), Query Frame = 0
Query:  205 LTRLQAMNVFLPEYLLGKLVCHINRVLLSRKLKAPNVVEFKGIIVLHFLAAS----------------------------------------------------NIPQRANALITELEHELAAVNRDLLYVPGATIFSLDDDHQRLRSRTVTQLTSLSQVNNPKKALGPVNNAICSALHPVFLASHYSRPQEKLLHVWQRLLQLLQGVPTSGPIKPMVDAVFAADRGYNDKTVVDFVNDVLRATSIGTHERSLDFPFVWSSGPIRKRHKGMEVSEKGCRAVYSAIRSPSTT---AGRPIENFVYRESYSGRIAAAYHNNKELFHSSKYTLVPEIGFPKSLCAKSIMEHHIVYDTGINSQIQ-----------PGNNA-------------------------------------------DCANAAEACASLLAGQNDTQCSVEFSNDQYVLRSDISARLGHLCDLTGIKRGMLPTAESEQEASNHIMT-ATSEWLIGRRKEQLIALMAPVRHIGPAEKRTFVKAASVTSLQ------------------TFFRGLGDEASCI-DKWNE------------------EGTRDESQVLKALPGFFANQGMVVADASSPLSAWKN-----KNMTARHIKTIGLVSSATVHRMADSSDGIIVLVDEEEAVCVAAIEIQTVSSLRTIQEAQNVATQFSKLVMVNGIGNEASAGEFYRAIVPTVEYRMQCLHHAVCFDCKYVLFTVSKGSNTGVGDIMYVALLGFTEAIKTGYKYCITGIRRCAFLWVGKEAERIPKSYDELLKDSHALDLFSYASFYNISKAYTELVDRHG 879
            L+RL  +  F+P+ LL KL    NR L SR  K   V E  G++VLH L AS                                                        R  +LIT++E E+AAVNR+LLY+PGAT+ SLDDDH R+ SR V+ L+ L Q NNPKK LGPV N + SAL  VF A H++R  EKLLH W+RL  LLQG  T+G +KPM DA+FAADRGYN K  ++FV+  L A+ +GTH+R + +PFV+ SG I +R KGM VSEKGCRAVY A    + +   +GR +E  +YRES SGRIAA  HNN+ LF S  +T+VP   F        + E  +++D      +            PG+N                                            D  N   + A  L G+     S     D       +  +   +C L G++ G  P     ++ +  +   + S   +  R +    L    R +  A  +T V   +V  LQ                  +    L + AS I  K  E                  EG+R+E +VLKA+P F +      A      +A +      + +  RHI ++GLV S +   +ADS DGI+   +E E   V A EI+T+++L T+ EA ++  QF  L +++ +G+  +A E +R ++P+ +YR QCLHHA     K+VLF V+   +   G I+Y  L+ F+E I+  Y + +  +    F WVG+E + IP+ YD LLK+SHA D+ S+AS+Y++S     L+D+ G
Sbjct:  247 LSRLSVLRTFIPDSLLEKLKAVANRALHSRGQKLTTVQELLGLLVLHVLCASYNEGPSVVCGAKMSDFFFHMGLSAARYRQVWSALTGCREKRTAVDYSTTGWCRTASRTTSLITDIESEVAAVNRELLYIPGATVLSLDDDHLRMASRAVSSLSFLQQHNNPKKGLGPVGNTLGSALTSVFFACHFTRRGEKLLHTWERLAPLLQGASTTGALKPMADAIFAADRGYNTKETLNFVSKTLGASLLGTHKRDMTYPFVFGSGAITRRSKGMVVSEKGCRAVYVATLKSNLSVRRSGRELEACLYRESCSGRIAAMIHNNRRLFKSRSFTIVPHSRFRGQEPLSVLAEEQVIFDADRRVSLPQGEQSAKVLNTPGSNQVDQALARIKILTFNQSEDPVWFLLRAFRFTSRTGHSFLATVTRDFENHVSSLAWALRGKQLAVGSDTLPQDHSSCEQLLRVKWECVCKLFGMRLGAEPQPSERRDLALRLERYSRSRINLFNRNDLQQMLGGFARGLSGAPSKT-VLVNAVLQLQADIGAGTVELDDDGADSVSLSASLTERASKILQKLREASLHAWVMKPLVSTAGMKEGSRNEIEVLKAIPSFLSKTRGAYARTRGVFNAVEYAHSDIRKIVIRHIPSVGLVESKSSTMIADSPDGILACKNEIEESFVCAAEIKTMTALTTVSEATHLREQFGPLTILSDVGSCGAADELFRTLIPSTQYRAQCLHHAATLGLKHVLFIVASSGSVTHGQIIYGCLIQFSEYIRHSYTFTLDSVLSMGFGWVGREPKYIPREYDALLKESHASDINSFASYYSLSTGIRRLIDKDG 1072          
BLAST of Ggra9153.t1 vs. uniprot
Match: R7QLD7 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QLD7_CHOCR)

HSP 1 Score: 185 bits (470), Expect = 1.960e-50
Identity = 87/136 (63.97%), Postives = 108/136 (79.41%), Query Frame = 0
Query:  257 NIPQRANALITELEHELAAVNRDLLYVPGATIFSLDDDHQRLRSRTVTQLTSLSQVNNPKKALGPVNNAICSALHPVFLASHYSRPQEKLLHVWQRLLQLLQGVPTSGPIKPMVDAVFAADRGYNDKTVVDFVNDV 392
            N P   NALIT +E ELAA+NR L++V G TI+S+DDDH RL SR V  LT+LSQV NPKKALGPVNNA CSAL   F+ASHYSRP EK+ HVW RL+QL+QGVPT G ++PMVD++FA+DRGYN+   + F+N++
Sbjct:   53 NKPVAGNALITYMEGELAAINRRLVHVEGVTIYSVDDDHNRLSSRAVLHLTNLSQVTNPKKALGPVNNAACSALTHAFIASHYSRPHEKITHVWHRLVQLIQGVPTVGALRPMVDSIFASDRGYNEVETISFLNEL 188          
BLAST of Ggra9153.t1 vs. uniprot
Match: R7Q9D7 (EF-hand domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q9D7_CHOCR)

HSP 1 Score: 166 bits (420), Expect = 1.140e-38
Identity = 85/164 (51.83%), Postives = 112/164 (68.29%), Query Frame = 0
Query:  344 EKLLHVWQRLLQLLQGVPTSGPIKPMVDAVFAADRGYNDKTVVDFVNDVLRATSIGTHERSLDFPFVWSSGPIRKRHKGMEVSEKGCRAVYSAI--RSPSTTAG---RPIENFVYRESYSGRIAAAYHNNKELFHSSKYTLVPEIGFPKSLCAKSIMEHHIVYD 502
            EKL+H W+RL+QLLQGV T+G ++PM  A+FAADRGYN K  ++F++DVL A+ +GTH+R L FPFV+  GPI +RH+GM VSE+GCRAVY+A     PS++     R +E  VYRES SGRIAA  HNN  LF S  +T+V    +      + +    IVYD
Sbjct:  425 EKLIHTWERLVQLLQGVSTTGSLRPMPGAIFAADRGYNSKVTIEFISDVLGASLLGTHKRDLWFPFVFGDGPITRRHRGMVVSERGCRAVYTARLKEGPSSSRASNLRAVEACVYRESCSGRIAALVHNNGALFPSRCFTIVCRDSYRAESAVRKLEAALIVYD 588          
BLAST of Ggra9153.t1 vs. uniprot
Match: A0A2V3ITK4 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ITK4_9FLOR)

HSP 1 Score: 103 bits (256), Expect = 9.490e-21
Identity = 55/158 (34.81%), Postives = 94/158 (59.49%), Query Frame = 0
Query:  644 EEGTRDESQVLKALPGFFANQGMVVADASSPLSAWKNKNMTARHIKTIGLVSSATVHRMADSSDGIIVLVDEEEAVCVAAIEIQTVSSLRTIQEAQNVATQFSKLVMVNGIGNEASAGEFYRAIVPTVEYRMQCLHHAVCFDCKYVLFTVSKGSNTGV 801
            +EG+ +E QVL  L  FF +    V +  S           A +I+TIGL+SS +   ++DS D ++V +D++EA  V A EI+T++++RT ++ ++V+  F   ++++G+G    AG   + +V + +YR++CLHHAVC     V F V+K S  G+
Sbjct:  104 KEGSLNEKQVLIELSTFFDSHN--VQEWLSTKMKGDTFKYRADYIRTIGLISSRSYLMISDSPDALMVYLDKQEARHVCAFEIKTMNTVRTTEDTRDVSRTFGSSILISGVGRSVDAGLVLQQLVSSTDYRLECLHHAVCLKANKVCFVVAKVSTCGI 259          
BLAST of Ggra9153.t1 vs. uniprot
Match: R7Q906 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q906_CHOCR)

HSP 1 Score: 89.4 bits (220), Expect = 7.450e-18
Identity = 40/67 (59.70%), Postives = 53/67 (79.10%), Query Frame = 0
Query:  268 ELEHELAAVNRDLLYVPGATIFSLDDDHQRLRSRTVTQLTSLSQVNNPKKALGPVNNAICSALHPVF 334
            E+E E AA+NR+LLY+P AT+FSLDDDH R+    +  LT L Q+NN KK+LGP++NA+CSAL+P F
Sbjct:    2 EIESETAAINRELLYIPNATVFSLDDDHLRMAFSALVVLTHLRQLNNQKKSLGPLDNALCSALNPFF 68          
BLAST of Ggra9153.t1 vs. uniprot
Match: R7QIE1 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QIE1_CHOCR)

HSP 1 Score: 75.5 bits (184), Expect = 2.280e-11
Identity = 38/63 (60.32%), Postives = 44/63 (69.84%), Query Frame = 0
Query:  423 MEVSEKGCRAVYSAIRSPSTTAGRPIENFVYRESYSGRIAAAYHNNKELFHSSKYTLVPEIGF 485
            M VSEKGCRAVYSA +    + GRPIE  VYRESYSGRIAA Y N+   F +  Y L+P+ GF
Sbjct:    1 MVVSEKGCRAVYSATKVSRGSKGRPIEASVYRESYSGRIAAVYSNDSTRFGAHHYCLIPKDGF 63          
The following BLAST results are available for this feature:
BLAST of Ggra9153.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
R7QKF54.330e-12133.25Uncharacterized protein n=2 Tax=Chondrus crispus T... [more]
R7QLD71.960e-5063.97Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
R7Q9D71.140e-3851.83EF-hand domain-containing protein n=1 Tax=Chondrus... [more]
A0A2V3ITK49.490e-2134.81Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7Q9067.450e-1859.70Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
R7QIE12.280e-1160.32Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000075_piloncontigtig00000075_pilon:225073..228233 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra9153.t1Ggra9153.t1Gracilaria gracilis GNS1m malemRNAtig00000075_pilon 225073..228233 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra9153.t1 ID=Ggra9153.t1|Name=Ggra9153.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=881bp
MPCINDVSKTQLNDGVPQNRNAENVIVSTDPQAADLNCSIVHTAPSLEHY
TIHSDSSNGFEECEIFTAENNQTQCRLISVQDTIESQNAFESQRIIAEDA
WSSLSFDGVDGVIDSTGSTADADASQTNDALNGEANRERLEQFVTGRING
WKYSSPFMPVTIGIDNTDKELSRTFIVEKNAILESVTKEVQASFQKPFTT
TGSNLTRLQAMNVFLPEYLLGKLVCHINRVLLSRKLKAPNVVEFKGIIVL
HFLAASNIPQRANALITELEHELAAVNRDLLYVPGATIFSLDDDHQRLRS
RTVTQLTSLSQVNNPKKALGPVNNAICSALHPVFLASHYSRPQEKLLHVW
QRLLQLLQGVPTSGPIKPMVDAVFAADRGYNDKTVVDFVNDVLRATSIGT
HERSLDFPFVWSSGPIRKRHKGMEVSEKGCRAVYSAIRSPSTTAGRPIEN
FVYRESYSGRIAAAYHNNKELFHSSKYTLVPEIGFPKSLCAKSIMEHHIV
YDTGINSQIQPGNNADCANAAEACASLLAGQNDTQCSVEFSNDQYVLRSD
ISARLGHLCDLTGIKRGMLPTAESEQEASNHIMTATSEWLIGRRKEQLIA
LMAPVRHIGPAEKRTFVKAASVTSLQTFFRGLGDEASCIDKWNEEGTRDE
SQVLKALPGFFANQGMVVADASSPLSAWKNKNMTARHIKTIGLVSSATVH
RMADSSDGIIVLVDEEEAVCVAAIEIQTVSSLRTIQEAQNVATQFSKLVM
VNGIGNEASAGEFYRAIVPTVEYRMQCLHHAVCFDCKYVLFTVSKGSNTG
VGDIMYVALLGFTEAIKTGYKYCITGIRRCAFLWVGKEAERIPKSYDELL
KDSHALDLFSYASFYNISKAYTELVDRHGP*
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