Ggra9143.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra9143.t1
Unique NameGgra9143.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length223
Homology
[Close]
BLAST of Ggra9143.t1 vs. uniprot
Match: A0A2V3IKJ0 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IKJ0_9FLOR)

HSP 1 Score: 74.3 bits (181), Expect = 1.530e-12
Identity = 74/215 (34.42%), Postives = 96/215 (44.65%), Query Frame = 0 
Query:   14 SSSDDGFQVNAVTTADGVRVPK-HSSPKPRRAAIRPLTA------YDDASSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEDAR-----ELQREREDEEALLMSELARFEARVDAIDRDQETVTQELRDATDFYEQVAQRRLERRVAMLRNRLRD-DSVVHSVREGEMEDMHAEDRRLDGDDLSDEHIEIKRVLRAPTK 215
            SSS   F++ AVTTADG+R P    +PK ++ + +P T       Y  ASS                                              D        LQ E  DEEA +++ELA FEA V  I RD + VT +L+DA D  EQ  QRRLE+RV  LR RLR  +S     R+  M D+ A +  LD  D   + I+IK VL+A  K
Sbjct:   15 SSSSSDFEIQAVTTADGIRKPSAEENPKSKQLSKQPSTTLNGLVPYVGASSSSSDEADTAALPTNPTRAKKRVRFSDGVEPNKRVRTASDDAMLERNDVSLTEHAVLQDEELDEEASIVAELAHFEAVVADIGRDYDAVTADLQDAEDMREQDTQRRLEQRVKSLRQRLRSAESSRLGERDHSMRDVDAANNELDDGDGYLDDIQIKGVLKAKLK 229
The following BLAST results are available for this feature:
BLAST of Ggra9143.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IKJ01.530e-1234.42Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 95..125
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 52..68
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..110
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 88..110

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000075_piloncontigtig00000075_pilon:88483..89151 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra9143.t1Ggra9143.t1Gracilaria gracilis GNS1m malemRNAtig00000075_pilon 88483..89151 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra9143.t1 ID=Ggra9143.t1|Name=Ggra9143.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=223bp
MPAATQRHDEDDDSSSDDGFQVNAVTTADGVRVPKHSSPKPRRAAIRPLT
AYDDASSSSSSSSSSSPAPVAPQPSPAPLAAAKKRVRFADAVSPRKRART
RAEDARELQREREDEEALLMSELARFEARVDAIDRDQETVTQELRDATDF
YEQVAQRRLERRVAMLRNRLRDDSVVHSVREGEMEDMHAEDRRLDGDDLS
DEHIEIKRVLRAPTKHVQRKRE*
back to top