Ggra912.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra912.t1
Unique NameGgra912.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length207
Homology
BLAST of Ggra912.t1 vs. uniprot
Match: A0A2V3IV86 (Putative D-cysteine desulfhydrase 1, mitochondrial n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IV86_9FLOR)

HSP 1 Score: 175 bits (444), Expect = 3.340e-50
Identity = 90/201 (44.78%), Postives = 129/201 (64.18%), Query Frame = 0
Query:    1 MHSLKLELNRKGHRAHVIDLGGSNRMGIWGDFLSFEELLQQGAKEKYTDIVLPSGAASTACGFAIANYLCGSPFRIHSISVENGAYYVYSYLNSMLELLGIQQETHAKKLLNVMVAIGAGYDVNSKNELELCVKVASETGILLDPIYSLKAFYRLMMELKTRRRAFSEACRILFVQTGAVFPLLDGRIFPFLRDSQIKEWN 201
            M  L+ +L  +G  A++I +GGSN +G+WG   +F ELL QG +E +TDIV+  G+  TA G AI NYL G P R+H+++V +   Y Y +LN ML  LG+ QE  A+ +L++  A G GY  +++ ELEL ++++  TGI+LDP+Y+LKA Y ++ ELK  +     + RILFV TG VF L DGRI P L  S  + W 
Sbjct:  162 MRLLQEKLAAEGKNAYLIGIGGSNEIGVWGYIDAFNELLTQGVRE-FTDIVVAVGSGGTASGLAIGNYLAGRPVRVHAVTVCDTPAYFYGHLNEMLAKLGLDQEVDAQDILHITEAKGLGYARSTEEELELGLQISRSTGIMLDPVYTLKAIYGMISELKKGKSPLRSSRRILFVHTGGVFGLFDGRIEPHLDSSLARTWR 361          
BLAST of Ggra912.t1 vs. uniprot
Match: C3ZIX7 (PALP domain-containing protein n=1 Tax=Branchiostoma floridae TaxID=7739 RepID=C3ZIX7_BRAFL)

HSP 1 Score: 142 bits (357), Expect = 1.190e-37
Identity = 71/200 (35.50%), Postives = 126/200 (63.00%), Query Frame = 0
Query:   12 GHRAHVIDLGGSNRMGIWGDFLSFEELLQQGAKEKYTDIVLPSGAASTACGFAIANYLCGSPFRIHSISVENGAYYVYSYLNSMLELLGIQQETHAKKLLNVMVAI-GAGYDVNSKNELELCVKVASETGILLDPIYSLKAFYRLMMELKTRRRAFSEACRILFVQTGAVFPLLDGRIFPFLRDS------QIKEWNWPP 204
            G  +++I +GGSN  G++G   +F+EL++QG  E++ D+V+  G+  T CG  +ANYL GS  RIH++++ + A Y + ++N+ L+ +G+  +  ++ +++++    G GY +++K ELE    +A  +GI+LDP+Y+ KA   L+ EL+T +  F +  RILF+ TG +F L DGR+   L+D       ++ +W W P
Sbjct:  121 GKESYLIPVGGSNLAGLFGYITAFQELMEQGVLERFDDLVVTVGSGGTTCGLCVANYLTGSKIRIHAVAICDDAAYFHRHINNTLQEIGLM-DVRSEDIVDIIEGYKGRGYALSTKKELEFVANIAHTSGIILDPVYTGKAAIGLLQELRTNQSRF-QGNRILFLHTGGIFGLYDGRMSAVLKDGMRHVTDRVHDW-WNP 317          
BLAST of Ggra912.t1 vs. uniprot
Match: bifunctional D-cysteine desulfhydrase/1-aminocyclopropane-1-carboxylate deaminase, mitochondrial-like isoform X1 n=1 Tax=Styela clava TaxID=7725 RepID=UPI00193A7451 (bifunctional D-cysteine desulfhydrase/1-aminocyclopropane-1-carboxylate deaminase, mitochondrial-like isoform X1 n=1 Tax=Styela clava TaxID=7725 RepID=UPI00193A7451)

HSP 1 Score: 142 bits (357), Expect = 4.090e-37
Identity = 72/199 (36.18%), Postives = 121/199 (60.80%), Query Frame = 0
Query:    8 LNRKGHRAHVIDLGGSNRMGIWGDFLSFEELLQQGAKEKYTDIVLPSGAASTACGFAIANYLCGSPFRIHSISVENGAYYVYSYLNSMLELLGIQQETHAKKLLNVMVAI-GAGYDVNSKNELELCVKVASETGILLDPIYSLKAFYRLMMELKTRRRAFSEACRILFVQTGAVFPLLDGRIFPFLRDSQIKEWNWPPI 205
            L + G  A++I +GGS+ +G+ G   ++ ELL Q  ++ + D+++  G+  T  G +I NYL G   +IH+++V + A Y + ++NSMLE +G+  ET ++ +++++    GAGY +++  + EL  K+A+ TGI  DP+YS K    L+ EL   R+ F +  RILFV TG +F L DGR+F F      + ++W  I
Sbjct:  176 LKKTGKPAYLICVGGSDSVGLHGYLNAWHELLDQKVQDNFDDVIVTCGSGGTIAGISIGNYLTGGKLKIHAVAVCDDAAYFHGHINSMLEEIGLGSETRSEDIVDIIEGYKGAGYGISTPEDHELYRKLAAATGIFCDPVYSGKGIKGLISELNVNRKCF-KGDRILFVHTGGIFGLYDGRMFDFFEKDVKRIYDWKDI 373          
BLAST of Ggra912.t1 vs. uniprot
Match: A0A6P4Y7I4 (bifunctional D-cysteine desulfhydrase/1-aminocyclopropane-1-carboxylate deaminase, mitochondrial-like isoform X1 n=3 Tax=Branchiostoma TaxID=7737 RepID=A0A6P4Y7I4_BRABE)

HSP 1 Score: 141 bits (355), Expect = 1.230e-36
Identity = 70/196 (35.71%), Postives = 125/196 (63.78%), Query Frame = 0
Query:   12 GHRAHVIDLGGSNRMGIWGDFLSFEELLQQGAKEKYTDIVLPSGAASTACGFAIANYLCGSPFRIHSISVENGAYYVYSYLNSMLELLGIQQETHAKKLLNVMVAI-GAGYDVNSKNELELCVKVASETGILLDPIYSLKAFYRLMMELKTRRRAFSEACRILFVQTGAVFPLLDGRIFPFLRDS------QIKEW 200
            G  +++I +GGSN++G++G   +F+EL++QG  E++ D+VL  G+  T CG  +ANYL GS  RIH++++ + A Y + ++N+ L+ +G+  +  ++ +++++    G GY +++K ELE    VA  +GI+LDP+Y+ KA   ++ EL+T    F +  RILF+ TG +F L DGR+   L+D       ++ +W
Sbjct:  203 GKESYLIPVGGSNQVGLFGYITAFQELIEQGVLERFDDLVLTVGSGGTTCGLCVANYLTGSKIRIHAVAICDDAAYFHRHINAALQEIGLT-DVRSEDIVDIIEGYKGRGYALSTKKELEFVANVAHTSGIILDPVYTGKATMGMLNELRTNHSRF-QGNRILFLHTGGIFGLYDGRMNTVLKDGMRHVTDRVHDW 396          
BLAST of Ggra912.t1 vs. uniprot
Match: putative D-cysteine desulfhydrase 1, mitochondrial n=1 Tax=Exaiptasia diaphana TaxID=2652724 RepID=UPI000A2A9CB5 (putative D-cysteine desulfhydrase 1, mitochondrial n=1 Tax=Exaiptasia diaphana TaxID=2652724 RepID=UPI000A2A9CB5)

HSP 1 Score: 137 bits (345), Expect = 2.060e-35
Identity = 69/199 (34.67%), Postives = 122/199 (61.31%), Query Frame = 0
Query:    7 ELNRKGHRAHVIDLGGSNRMGIWGDFLSFEELLQQGAKEKYTDIVLPSGAASTACGFAIANYLCGSPFRIHSISVENGAYYVYSYLNSMLELLGIQQETHAKKLLNVMVAI-GAGYDVNSKNELELCVKVASETGILLDPIYSLKAFYRLMMELKTRRRAFSEACRILFVQTGAVFPLLDGR---IFPFLRDSQIKEWN 201
            +L  KG   +++ LGGSN +G++G   +F+EL++Q   E + DIVL  G+A +A G AI NYL GS  + H++   + A   Y ++N  L+ +G+  +  A+ +++++    G GY +++K ELEL V+++S TGI+LDP+Y++K+   ++ E+      F +  R+L++ TG V+ L DGR   +   +  + I+EW 
Sbjct:  171 KLREKGRVPYIVPLGGSNPLGLYGYISAFQELIEQKVLENFDDIVLCIGSAGSAAGIAIGNYLTGSKVKCHAVCASDNAKNFYEHINEELDAIGM--DVKAEDIIDIVDGYKGKGYGISTKEELELIVRISSLTGIVLDPVYTIKSVRGMLSEMNANPSRF-KGSRVLYIHTGGVYGLYDGRMDDVVTEMTSNSIREWK 366          
BLAST of Ggra912.t1 vs. uniprot
Match: A7RTD7 (Predicted protein n=3 Tax=Nematostella vectensis TaxID=45351 RepID=A7RTD7_NEMVE)

HSP 1 Score: 136 bits (343), Expect = 3.210e-35
Identity = 72/200 (36.00%), Postives = 123/200 (61.50%), Query Frame = 0
Query:    1 MHSLKLELNRKGHRAHVIDLGGSNRMGIWGDFLSFEELLQQGAKEKYTDIVLPSGAASTACGFAIANYLCGSPFRIHSISVENGAYYVYSYLNSMLELLGIQQETHAKKLLNVMVAI-GAGYDVNSKNELELCVKVASETGILLDPIYSLKAFYRLMMELKTRRRAFSEACRILFVQTGAVFPLLDGRIFPFLRDSQIKE 199
            M +L  +L ++G   +VI LGGSN +G++G   +F EL +Q   +++ D+V+  G++ TA G AI NYL G+  + H+++V + A + Y  +N  L  +G+  + HA+ +L+++    G GY V++  ELE  V+++S TGI+LDP+Y++K+   ++ E+K     F +  R+L++ TG VF L DGRI P L    +  
Sbjct:  152 MENLAEKLRQQGKSPYVIPLGGSNEIGLFGYITAFHELTKQNVLDEFDDMVMCVGSSGTAAGIAIGNYLTGNKLKCHAVNVCDDAAFFYKCVNEELVSVGLT-DVHAEDILDIIEGYKGKGYAVSTTEELEDIVRISSTTGIMLDPVYTIKSVRGMLAEMKNNPSRF-KGKRVLYIHTGGVFGLFDGRIEPVLEAMGVSN 349          
BLAST of Ggra912.t1 vs. uniprot
Match: bifunctional D-cysteine desulfhydrase/1-aminocyclopropane-1-carboxylate deaminase, mitochondrial-like n=1 Tax=Gigantopelta aegis TaxID=1735272 RepID=UPI001B889AAA (bifunctional D-cysteine desulfhydrase/1-aminocyclopropane-1-carboxylate deaminase, mitochondrial-like n=1 Tax=Gigantopelta aegis TaxID=1735272 RepID=UPI001B889AAA)

HSP 1 Score: 137 bits (345), Expect = 3.730e-35
Identity = 74/194 (38.14%), Postives = 117/194 (60.31%), Query Frame = 0
Query:   12 GHRAHVIDLGGSNRMGIWGDFLSFEELLQQGAKEKYTDIVLPSGAASTACGFAIANYLCGSPFRIHSISVENGAYYVYSYLNSMLELLGIQQETHAKKLLNVMVAI-GAGYDVNSKNELELCVKVASETGILLDPIYSLKAFYRLMMELKTRRRAFSEACRILFVQTGAVFPLLDGRIFPFLRD----SQIKEW 200
            G  +++I +GGSN +G +G     EEL +QG  E++ D++   G+  TA G AI NYL GS  RIH ++V + A Y +S++N ML  LG+  +  ++ +++++    G GY ++S  EL+L  +++ +TGI+LDP+Y+ K  Y +  ELK     F    RILF+ TG VF L DGR+   L+     ++IK W
Sbjct:  210 GESSYLIPVGGSNEVGFYGYIQVMEELRKQGVLERFDDLIFSCGSGGTAAGLAIGNYLTGSKLRIHGVAVSDDAAYFHSHVNEMLSALGLA-DVKSEDIVDIVEGYKGKGYGISSPGELDLITEISCKTGIILDPVYTGKGAYGMWHELKRNPDRF-HGKRILFLHTGGVFGLYDGRMDALLKSKADTNKIKFW 401          
BLAST of Ggra912.t1 vs. uniprot
Match: bifunctional D-cysteine desulfhydrase/1-aminocyclopropane-1-carboxylate deaminase, mitochondrial-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1D8DE8 (bifunctional D-cysteine desulfhydrase/1-aminocyclopropane-1-carboxylate deaminase, mitochondrial-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1D8DE8)

HSP 1 Score: 136 bits (343), Expect = 5.720e-35
Identity = 76/183 (41.53%), Postives = 114/183 (62.30%), Query Frame = 0
Query:   12 GHRAHVIDLGGSNRMGIWGDFLSFEELLQQGAKEKYTDIVLPSGAASTACGFAIANYLCGSPFRIHSISVENGAYYVYSYLNSMLELLGIQQETHAKKLLNVMVAI-GAGYDVNSKNELELCVKVASETGILLDPIYSLKAFYRLMMELKTRRRAFSEACRILFVQTGAVFPLLDGRIFPFLR 193
            G   + I +GGSN +G++G    FEELL QG +E + DIV   G+  TA G AIAN+L GS  RIH ++V + A Y + + N M+E +G+     ++ +L+++    G GY ++++ EL+  VK++S TGI+LDP+Y+ KA   LM EL +    F +  RILF+ TG V+ L DGRI   L+
Sbjct:  194 GELCYQIPVGGSNSVGLFGYISVFEELLSQGVQENFDDIVFACGSGGTAGGLAIANFLTGSKLRIHGVAVSDDATYFHHHCNEMIEAVGVS--ARSEDILDIIDGHKGEGYGISTQEELDFIVKISSTTGIMLDPVYTGKAVKGLMHELHSNPDMF-KGDRILFLHTGGVYGLYDGRIEDTLK 373          
BLAST of Ggra912.t1 vs. uniprot
Match: A0A6P8GZ37 (bifunctional D-cysteine desulfhydrase/1-aminocyclopropane-1-carboxylate deaminase, mitochondrial-like n=1 Tax=Actinia tenebrosa TaxID=6105 RepID=A0A6P8GZ37_ACTTE)

HSP 1 Score: 136 bits (342), Expect = 6.330e-35
Identity = 70/192 (36.46%), Postives = 118/192 (61.46%), Query Frame = 0
Query:    9 NRKGHRAHVIDLGGSNRMGIWGDFLSFEELLQQGAKEKYTDIVLPSGAASTACGFAIANYLCGSPFRIHSISVENGAYYVYSYLNSMLELLGIQQETHAKKLLNVMVAI-GAGYDVNSKNELELCVKVASETGILLDPIYSLKAFYRLMMELKTRRRAFSEACRILFVQTGAVFPLLDGRIFPFLRDSQIKE 199
            + KG   ++I +GGSN +G++G   +FEEL+QQ   E Y DIV+  G++ TA G AI NYL GS  + H++   + A Y Y  +N  L+ LG+     A+++++++    G GY +++K ELE  V+++S TG++LDP+Y++K+   ++ E+      F+   R+L++ TG VF L DGR+   ++D   K 
Sbjct:  178 SEKGMSPYIIPVGGSNSVGVFGYITAFEELIQQNVLEDYDDIVMCIGSSGTAAGLAIGNYLTGSKLKCHAVCACDDATYFYQCINEELDALGLN--VTAEEIIDIIEGYKGVGYALSTKEELEDIVRISSTTGVMLDPVYTIKSVRGMLSEMTNNPSRFNGR-RVLYLHTGGVFGLYDGRMDSIIQDITAKS 366          
BLAST of Ggra912.t1 vs. uniprot
Match: A0A1S3JMM0 (bifunctional D-cysteine desulfhydrase/1-aminocyclopropane-1-carboxylate deaminase, mitochondrial n=1 Tax=Lingula unguis TaxID=7574 RepID=A0A1S3JMM0_LINUN)

HSP 1 Score: 136 bits (342), Expect = 1.480e-34
Identity = 75/198 (37.88%), Postives = 121/198 (61.11%), Query Frame = 0
Query:    9 NRKGHRAHVIDLGGSNRMGIWGDFLSFEELLQQGAKEKYTDIVLPSGAASTACGFAIANYLCGSPFRIHSISVENGAYYVYSYLNSMLELLGIQQETHAKKLLNVMVAI-GAGYDVNSKNELELCVKVASETGILLDPIYSLKAFYRLMMELKTRRRAFSEACRILFVQTGAVFPLLDGRIFPFL----RDSQIKEWN 201
            + +G  +++I +GGSN +G++G   +F+E++ QG +  + DIV   G+  TA G A+ NYL GS  RIH++ V +   Y + ++N  LE  GI  +T +  +++++    G GY ++++ ELE  + V++ TGI+LDP+Y+ KA   L+ EL T+   F +  RILF+ TG VF L DGR+   L    R S+IK W 
Sbjct:  236 DERGENSYLIPVGGSNVVGLFGYITAFQEMISQGIQRDFDDIVFACGSGGTAAGLALTNYLTGSRLRIHAVIVSDDPKYFHDHINETLEATGIT-DTKSCDIVDIIDGYKGKGYGLSTEEELEFILDVSTSTGIMLDPVYTGKAVRGLVRELTTQPGRF-KGTRILFLHTGGVFGLFDGRMAGTLKVDKRTSKIKLWR 431          
The following BLAST results are available for this feature:
BLAST of Ggra912.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IV863.340e-5044.78Putative D-cysteine desulfhydrase 1, mitochondrial... [more]
C3ZIX71.190e-3735.50PALP domain-containing protein n=1 Tax=Branchiosto... [more]
bifunctional D-cysteine desulfhydrase/1-aminocyclopropane-1-carboxylate deaminase, mitochondrial-like isoform X1 n=1 Tax=Styela clava TaxID=7725 RepID=UPI00193A74514.090e-3736.18bifunctional D-cysteine desulfhydrase/1-aminocyclo... [more]
A0A6P4Y7I41.230e-3635.71bifunctional D-cysteine desulfhydrase/1-aminocyclo... [more]
putative D-cysteine desulfhydrase 1, mitochondrial n=1 Tax=Exaiptasia diaphana TaxID=2652724 RepID=UPI000A2A9CB52.060e-3534.67putative D-cysteine desulfhydrase 1, mitochondrial... [more]
A7RTD73.210e-3536.00Predicted protein n=3 Tax=Nematostella vectensis T... [more]
bifunctional D-cysteine desulfhydrase/1-aminocyclopropane-1-carboxylate deaminase, mitochondrial-like n=1 Tax=Gigantopelta aegis TaxID=1735272 RepID=UPI001B889AAA3.730e-3538.14bifunctional D-cysteine desulfhydrase/1-aminocyclo... [more]
bifunctional D-cysteine desulfhydrase/1-aminocyclopropane-1-carboxylate deaminase, mitochondrial-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1D8DE85.720e-3541.53bifunctional D-cysteine desulfhydrase/1-aminocyclo... [more]
A0A6P8GZ376.330e-3536.46bifunctional D-cysteine desulfhydrase/1-aminocyclo... [more]
A0A1S3JMM01.480e-3437.88bifunctional D-cysteine desulfhydrase/1-aminocyclo... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036052Tryptophan synthase beta subunit-like PLP-dependent enzymeGENE3D3.40.50.1100coord: 3..185
e-value: 6.2E-28
score: 99.8
IPR036052Tryptophan synthase beta subunit-like PLP-dependent enzymeSUPERFAMILY53686Tryptophan synthase beta subunit-like PLP-dependent enzymescoord: 8..180
NoneNo IPR availablePANTHERPTHR43780:SF21-AMINOCYCLOPROPANE-1-CARBOXYLATE DEAMINASE-RELATEDcoord: 1..187
IPR0272781-aminocyclopropane-1-carboxylate deaminase/D-cysteine desulfhydrasePANTHERPTHR437801-AMINOCYCLOPROPANE-1-CARBOXYLATE DEAMINASE-RELATEDcoord: 1..187

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000049_piloncontigtig00000049_pilon:334500..335120 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra912.t1Ggra912.t1Gracilaria gracilis GNS1m malemRNAtig00000049_pilon 334500..335120 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra912.t1 ID=Ggra912.t1|Name=Ggra912.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=207bp
MHSLKLELNRKGHRAHVIDLGGSNRMGIWGDFLSFEELLQQGAKEKYTDI
VLPSGAASTACGFAIANYLCGSPFRIHSISVENGAYYVYSYLNSMLELLG
IQQETHAKKLLNVMVAIGAGYDVNSKNELELCVKVASETGILLDPIYSLK
AFYRLMMELKTRRRAFSEACRILFVQTGAVFPLLDGRIFPFLRDSQIKEW
NWPPIN*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036052Trypto_synt_PLP_dependent
IPR027278ACCD_DCysDesulf