Ggra9116.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra9116.t1
Unique NameGgra9116.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length551
Homology
BLAST of Ggra9116.t1 vs. uniprot
Match: A0A2V3IGX3 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IGX3_9FLOR)

HSP 1 Score: 636 bits (1641), Expect = 9.540e-223
Identity = 318/505 (62.97%), Postives = 383/505 (75.84%), Query Frame = 0
Query:   46 SSVTIWAPRASCSGTFTSSTAEHSDPPFPSVVIREAVVDRRYLSMKQFRDVHPTVPYVRIILYMSVHLSVSLTREDAAAQLLLQNTSSSSFRAHVDFVTRVDPFLIRGKYKPGKKTKRGHQVSEWQVAVSIRPTDENSDLTPLQFIHQIYMLANEDGTILSLLLPLKRFDGVAERFDPAFDLRCVTGWGSHSVYPAITKLRREPQCYKGARHASGALLVSGSALYGKKKTNPKHYREVAHFAARALQGPLRFEAVAMSIVVNNSYSDRELVCRGNDECHYVMRQRNYQLLENVRAVVEGVFEELKLDRSVWQKLILVPYGRLGSDATGTEAHDPSRSSHRYGQYHATFFTYAMLSPFFNWSASYDMDEFIAGIPSS-GA-FSPKNFEDVMDRWTFKLSGGHVSFPWLNFLVPTDASKELTEDIIRGNVPILKG-GKDCYGIGKDSTGKAAVRCDVGLGFTIHKPVIRKKSSDPTELRQIQGKRGSRLLRTWHPRIGGSMGKCTFS 547
            +SVTIW+P   C+G F S+ A  ++P FPS VIR+AV+D RYLS +QFR VHP  PY+RIILY+SVHLS+SLTR  A AQ+L+Q   S S RAHVD+V RVDPFL+ G YKPGKKTKRGHQ+SEWQVAVSIRPT +NS+L   +F+ QI  L+ E    LSL+LPLKRFDGV ERF P+FDL C TGW   S YP I  L +EP C+ GAR + GA+L SGSALYGKKK NP++Y EVAHFAARAL GPLRF+ VAMSIVVNNSYSDREL C  +  CH +M+++N QLLE+VR VVE VFEEL+++R +W  LIL+P+ RLGSDA GTEA D  RSSHRYGQYHATFF+YAMLSPF+ W+ SYD+DEFIA  PSS GA F  ++    +D  +     G++ F WLNFLV  ++S ELT+ I+ G  P LKG GK+CY    D TGK+AVRCD GLGFTIH+PVIRKK+ +PT L QIQG+  S+ LRTWHPR G S GKC F+
Sbjct:   62 ASVTIWSPTVRCTGKFASAPASFAEPSFPSAVIRDAVIDHRYLSKEQFRTVHPNAPYLRIILYVSVHLSLSLTRRGAVAQMLVQGAPSPSLRAHVDYVVRVDPFLMLGPYKPGKKTKRGHQISEWQVAVSIRPTGDNSNLHQREFLRQIRTLSQESRGELSLVLPLKRFDGVTERFSPSFDLGCATGWELSSSYPKIPLLNKEPVCHSGARKSKGAILFSGSALYGKKKVNPEYYSEVAHFAARALNGPLRFQNVAMSIVVNNSYSDRELACGSDRNCHAIMQEKNSQLLEDVRRVVEQVFEELRVERKLWSNLILLPFCRLGSDANGTEASDACRSSHRYGQYHATFFSYAMLSPFYKWAVSYDLDEFIANTPSSKGAKFVQQDASRTLD--SVNRHSGYMFFSWLNFLVKDNSSIELTKHIMSGKRPELKGRGKECYAFTNDRTGKSAVRCDTGLGFTIHRPVIRKKNPNPTILDQIQGEHWSKSLRTWHPRFGSSRGKCHFA 564          
BLAST of Ggra9116.t1 vs. uniprot
Match: A0A2V3IM97 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IM97_9FLOR)

HSP 1 Score: 271 bits (693), Expect = 2.050e-80
Identity = 163/502 (32.47%), Postives = 264/502 (52.59%), Query Frame = 0
Query:   49 TIWAPRASCSGTFTSSTAEHSDPPFPSVVIREAVVDRRYLSMKQFRDVHPTVPYVRIILYMSVHLSVSLTREDAAAQLLLQNTSSSSFRAHVDFVTRVDPFLIRG--KYKPGKKTKRGHQVSEWQVAVSIRPTDENSDLTPLQFIHQIYMLANEDGTILSLLLPLKRFDGVAERFDPAFDLRCVTGWGSHSVYPAITKLRREPQCYKGARHASGALLVSGSALYGKKKTNPKHYREVAHFAARALQGPLRFEAVAMSIVVNNSYSDRELVCRGND-ECHYVMRQRNYQLLENVRAVVEGVFEELKLDRSVWQKLILVPYGRLGSDATGTEAHDPSRSSHRYGQYHATFFTYAMLSPFFNWSASYDMDEFIAGIPSSGAFSPKN------FEDVMDRWTFKLSGGHVSFPWLNFLVPTDASKELTEDIIRGNVPIL----KGGKDCYGIGKDSTGKAAVRCDVGLGFTIHKPVIRKKSSDPTELRQIQGKRGSRLLRTWHPRI 537
            +IW P   C G+F+S+++ HS+  FP  V+R+A +DRR  S++Q    H  +P  R++L +S HLSV L   +A  +L     ++ + R  +D V  ++        +Y PG+ TKRGH+V+EWQV +++R T    D     F   +  LA +    L L L L  FDG    F+P   L C+ GW      P I + R  P      +  S A+L+  ++L G KK   + + EVAH+AARAL+GP+RF+ V + ++V+ S ++    C  ND  C     + N  L  ++   V    + + +   V+++++L+P+ RLG+   G E ++P   S RYGQ   TF  Y++L+ +F W++ YD+DE+IA     G  SP N      F+ ++    + +       PWLNF +       +T +++ G  P+L     G  +CY + +   GKA VR DVGLGF+IH+P+++         R+ + +  S  +R WH R+
Sbjct:   58 SIWYPELVCRGSFSSTSSPHSNASFPEAVLRDAYLDRRPASLRQAFGKHGPLPKQRVVLAISAHLSVRLEESEATVRL----ANAPNVRVSIDDVREIESTSKEKAFEYAPGRTTKRGHEVAEWQVIITLRSTYFRRD-----FEQHLRNLAGDPLVQLKLQLSLSHFDGNNSTFEPRLSLGCIFGWD----VPEIIQ-RHAPADIDRLQQPSSAVLLCANSLSGNKKLQNRSHAEVAHWAARALRGPVRFDIVVLPVIVDISAAE----CSPNDLHCFEDTSRTNSVLFNSLAKNVAQELQRIGVAEEVFERVVLIPFCRLGAHVLGFEHNNPCSGSQRYGQIQVTFMPYSVLAKYFKWASMYDLDEYIAPHHEKGVASPLNTNASDLFDHILHE-NYHIKSPAFVIPWLNFRIRRQDLVNITHELMHGVTPVLVSPSNGDTNCYRLPRHRIGKAVVRYDVGLGFSIHQPIVQIPGMGLQHNRK-ETRVDSMDIRVWHARL 539          
BLAST of Ggra9116.t1 vs. uniprot
Match: A0A5J4Z3C5 (Uncharacterized protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z3C5_PORPP)

HSP 1 Score: 141 bits (355), Expect = 4.510e-32
Identity = 142/531 (26.74%), Postives = 228/531 (42.94%), Query Frame = 0
Query:   44 APSSVTIWAPRAS-CSGTFT-SSTAEHSDPPFPSVVIREAVVDRRYLSMKQFRDVHPTVPYVRIILYMSVHLSVSLTREDAAAQLLLQNTSSSSF--RAHVDFVTRVDPFLIRGKYKPGKKTKRGHQVSEWQVAVSIRPTDENSDLTPLQFIHQIYMLANEDGTILSLLLP--LKRFDGVAER---FDPAFDLRCVTGWGSHSVYPAITKLRREPQCYKGARHASGALLVSGSALYGKKKTNPKHYREVAHFAARALQGPLRFEAVAMSIVVNNSYSDRELVCR--------GNDECHYVMRQRNYQLLENVRAVVEGVFEELKLDRSVWQKLILVPYGRLGSDATGTEAHDPSRSSHRY-GQYHATFFTYAMLSPFFNWSASYDMDEFIAGIPSSGAFSPKNFEDVMDRWTFKLSGGHVSFPWLNFLVPTDASKELTEDIIRGNVPILKG------GKDCYGIGKDST---GKAAVRCDVGLGFTIHKP-VIRKKSSDPTELRQ----IQGK----RGSRLL--RTWHPR 536
            +P+S+ +W P A  C GTF     +E        + IREA +DRR+ +    ++  PT  + RI+L+++ H S +++ E  +A+  L +T+ S F    HV+ V     F +     P   T R H   +W V + + P                 + +  D  ++ L L        GV E    +   F + C   W +  + P +   R    C      A+GA +V+   L+G K  +     E AH+A R+L G  +F+ V +S+ V +S S+ E  C         GN +C   + +RN   L  ++  +E     L +  +V+ +++L PY RLG+   G EA+  +     Y GQ  A    Y + SP F W AS D+DEF A         P+   ++ DR    L+ G   FPWLN          +T+ ++  ++P L         + CY +        GK    C +    T+HK   +R  ++    LR+     Q K    R   +L  RTWH R
Sbjct:  124 SPASIQVWYPTAKRCVGTFLLPENSESFGLDHHVMWIREAYIDRRFAT----QEFKPTPSHTRIVLHVTSHASATMSTETTSAR--LYDTALSEFVQGIHVESV-----FSLSHLIAPLTVT-RDH---DWVVHLMMDPA----------------LSSGWDQLMIELKLSGSYAEDSGVGEHIFSYTARFAVGCAADWFAPDIIPPVLNSRGFNTC----ADATGAAVVTSGGLFGAKLDSGV---EAAHYAVRSLLGLAQFDVVGISVRVPHSVSEIEAWCTRANSRPEDGNTKCREGLHKRNVLALSRLKCRIETELTRLGVPSTVFARIVLFPYCRLGTSHKGGEAYGRACELSLYHGQTVALELAYHLFSPHFAWVASADVDEFFAPSYPWSKHVPEAASELFDRIRTHLTDGLYIFPWLNVFDSERNYARVTDSLLHASLPALVDPETQLTNESCYEVNPRPDRRHGKVVAHCKLCGAITVHKLFAVRPNATQAWHLREKGLSFQPKWMTPRFDSILGWRTWHVR 616          
BLAST of Ggra9116.t1 vs. uniprot
Match: A0A5J4YYK6 (Uncharacterized protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YYK6_PORPP)

HSP 1 Score: 138 bits (348), Expect = 3.970e-31
Identity = 139/535 (25.98%), Postives = 231/535 (43.18%), Query Frame = 0
Query:   49 TIWAPRASCSGTFTSSTAEHSDPPFPS----------------VVIREAVVDRRYLSMKQFR-DVHPTVPYVRIILYMSVHLSVSLTREDAAAQLLLQNTSSSSFRAH-VDFVTRV--DPFLIRGKYKPGKKTKRGHQVSEWQVAVSIRPTDENSDLTP--LQFIHQIYMLANEDGTILSLLLPLKRFDGVAERFDPAFDLRCVTGWGSHSVYPAITKLRREPQCYKGARHASGALLVSGSALYGKKKTNPKHYREVAHFAARALQGPLRFEAVAMSIVVNNSYSDRELVCRGNDECHYVM-----RQRNYQLLENVRAVVEGVFEELKLDRSVWQKLILVPYGRLGSDATGTEAHDPSRSSHRYGQYHATFFTYAMLSPFFNWSASYDMDEFIAGIPSSGAFSPKNFEDVMDRWTF-KLSGGHVSFPWLNFLVPT-DASKELTEDIIRGNV---------PILKG-----GKDCYGIGKDSTGKAAVRCDVGLGFTIHKPVIRKKSS----DPTELRQIQGKRGSRLLRTWHPR 536
            ++W P   CSG F     E      PS                V++RE  +D R  + +    D H      R+++ +S+  + S+ ++ A A+L   N  +S ++ H ++ V R+  D + +  +Y+  +K  +    ++W +A+ + P    S  +   +++   ++M A +D               +A  F     L C +GW    + P      R  QC      +SGA++++GSAL+G K  +    RE AHF AR+L GP+RF+ V + + +  S      + R   ECH V         N QLL+ V   V      L L  ++  ++   P+ RLGS    +EA  P + S+   QY +   TY + +P F W   YD+DEF+A + S    +    + V     F +L    V  PW N LV T +  + L+  +IR  +         P L        + C  + + S GK A+ C+ G+  +IH      + +    D   +R +     S LLR WH R
Sbjct:  117 SLWYPSLQCSGDFVLDAHEADKVWSPSHMNLNPTEWTWLFQGQVIVRETAIDHRPAAQRFLTSDSHH-----RMLVLLSMSSNFSIEQDSAWARLPAVN--ASEYQPHRLEEVPRLRADAYPLTDRYRQLEKNPKVMD-ADWVLAIELDPGTNLSTHSRRMVEYGFAVHMRAPQDS----------EHQPIALTFSGRLALACASGWEEAYLLPHHIP-HRSAQC----SDSSGAVVIAGSALFGPKLRDA---REAAHFIARSLHGPVRFDFVGVPVAMEYS------MARIEHECHSVRCMIHKHLLNLQLLQKVERDVRTELRVLGLSPNLTHQVAFFPFCRLGS-LVMSEAGSPCKVSYYRSQYVSLMLTYLLYAPRFRWLTVYDVDEFVAPLGSVHGSARAWRKQVSATSVFDQLGKSAVVIPWHNVLVRTAEDRRALSRQLIRSTIGQDGQTADYPRLYNRECAVSQSCTYMARRSNGKPAISCEKGMQISIHHAFTLSEHARSIVDVDTIRVLDESLNSSLLRIWHAR 618          
The following BLAST results are available for this feature:
BLAST of Ggra9116.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A2V3IGX39.540e-22362.97Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IM972.050e-8032.47Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A5J4Z3C54.510e-3226.74Uncharacterized protein n=1 Tax=Porphyridium purpu... [more]
A0A5J4YYK63.970e-3125.98Uncharacterized protein n=1 Tax=Porphyridium purpu... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 5..15
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 21..550
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..4
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 16..20
NoneNo IPR availableTMHMMTMhelixcoord: 5..27

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000075_piloncontigtig00000075_pilon:21730..23465 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra9116.t1Ggra9116.t1Gracilaria gracilis GNS1m malemRNAtig00000075_pilon 21730..23465 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra9116.t1 ID=Ggra9116.t1|Name=Ggra9116.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=551bp
MPSPFIFVFAAVFILSMSFLVVEFTQLDAPIQSPPQQHRIVPKAPSSVTI
WAPRASCSGTFTSSTAEHSDPPFPSVVIREAVVDRRYLSMKQFRDVHPTV
PYVRIILYMSVHLSVSLTREDAAAQLLLQNTSSSSFRAHVDFVTRVDPFL
IRGKYKPGKKTKRGHQVSEWQVAVSIRPTDENSDLTPLQFIHQIYMLANE
DGTILSLLLPLKRFDGVAERFDPAFDLRCVTGWGSHSVYPAITKLRREPQ
CYKGARHASGALLVSGSALYGKKKTNPKHYREVAHFAARALQGPLRFEAV
AMSIVVNNSYSDRELVCRGNDECHYVMRQRNYQLLENVRAVVEGVFEELK
LDRSVWQKLILVPYGRLGSDATGTEAHDPSRSSHRYGQYHATFFTYAMLS
PFFNWSASYDMDEFIAGIPSSGAFSPKNFEDVMDRWTFKLSGGHVSFPWL
NFLVPTDASKELTEDIIRGNVPILKGGKDCYGIGKDSTGKAAVRCDVGLG
FTIHKPVIRKKSSDPTELRQIQGKRGSRLLRTWHPRIGGSMGKCTFSPSD
*
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