Ggra9018.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra9018.t1
Unique NameGgra9018.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length224
Homology
BLAST of Ggra9018.t1 vs. uniprot
Match: A0A2V3J3X2 (NAD(P)-bd_dom domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J3X2_9FLOR)

HSP 1 Score: 275 bits (703), Expect = 7.340e-91
Identity = 140/222 (63.06%), Postives = 170/222 (76.58%), Query Frame = 0
Query:    1 MSTSILIIGANGRTGQKLIQAASAHESAPQIHAFVRNPDSLSPSLTSQCNSVQKGDALNAEDVRNALLASNATHVVVAIGVPNDLSESSLRTDSAKAITEALGKLERKVKVVVLSSIGAGGTAIKIGFGIGMIVCAMLRNVLKDHDGQEECFSKSFENKEEDLLIVRPTSLTEGQGGAKLVTFDGQKKSPSSKTDRQDLAEWIITQVCEDGDQFGHAVNVTR 222
            M+ SILIIGANGR GQ LI AA+   + P IHAFVRNP SL P + S C+SVQ+G+AL AEDVR AL+ S+ATH++VAIGVPN  + S+LR DSAKAITEA+ + E+ VKVVV+SS+GAGGT IK GFGIG +   +LR+VL DHD QEE F   FEN ++ LLIVRPT LTEG+ GAK+  FDG K++PS K DR D+A WI  QVC DG+ FG AVN+TR
Sbjct:    1 MAASILIIGANGRMGQHLIYAAARETNKPTIHAFVRNPASLPPPVASVCDSVQRGNALEAEDVRAALVESSATHIIVAIGVPNSTARSTLRADSAKAITEAIERSEQPVKVVVVSSMGAGGTKIKFGFGIGSLTHFILRHVLDDHDHQEERFLSFFENDKDKLLIVRPTELTEGRAGAKVTLFDGDKRTPSMKVDRGDVATWIAGQVCRDGECFGRAVNITR 222          
BLAST of Ggra9018.t1 vs. uniprot
Match: A0A2V3INI8 (NAD(P)-bd_dom domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3INI8_9FLOR)

HSP 1 Score: 262 bits (670), Expect = 7.870e-86
Identity = 134/222 (60.36%), Postives = 168/222 (75.68%), Query Frame = 0
Query:    1 MSTSILIIGANGRTGQKLIQAASAHESAPQIHAFVRNPDSLSPSLTSQCNSVQKGDALNAEDVRNALLASNATHVVVAIGVPNDLSESSLRTDSAKAITEALGKLERKVKVVVLSSIGAGGTAIKIGFGIGMIVCAMLRNVLKDHDGQEECFSKSFENKEEDLLIVRPTSLTEGQGGAKLVTFDGQKKSPSSKTDRQDLAEWIITQVCEDGDQFGHAVNVTR 222
            M+ SILIIGANGR GQ LI AA+     P IHAFVRNP SL PS+ S C SV KGDAL ++DV+ AL A++ATHVVVA+GVP+    SSLRTDSA  ITEA+ +  + V+VVV+SSIGAGGT IK  FG+G +   ML++VL DHD QEE F + FEN +E LLIVRPT LT+G GG K++ FDGQ+K+P+ K DR+D++ WI+ Q+C +GD FG AVN+TR
Sbjct:    1 MTASILIIGANGRMGQNLIHAATLQTKKPHIHAFVRNPLSLPPSVASLCYSVHKGDALCSDDVQAALTATSATHVVVAVGVPDSNVLSSLRTDSANTITEAISRSNQTVQVVVVSSIGAGGTRIKFSFGLGTLFHFMLQHVLTDHDHQEERFLRFFENDKERLLIVRPTQLTDGYGGDKVILFDGQQKTPTLKVDRRDVSVWILGQICGEGDCFGRAVNITR 222          
BLAST of Ggra9018.t1 vs. uniprot
Match: A0A2V3IUG3 (NAD(P)-bd_dom domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IUG3_9FLOR)

HSP 1 Score: 250 bits (639), Expect = 4.030e-81
Identity = 116/222 (52.25%), Postives = 165/222 (74.32%), Query Frame = 0
Query:    1 MSTSILIIGANGRTGQKLIQAASAHESAPQIHAFVRNPDSLSPSLTSQCNSVQKGDALNAEDVRNALLASNATHVVVAIGVPNDLSESSLRTDSAKAITEALGKLERKVKVVVLSSIGAGGTAIKIGFGIGMIVCAMLRNVLKDHDGQEECFSKSFENKEEDLLIVRPTSLTEGQGGAKLVTFDGQKKSPSSKTDRQDLAEWIITQVCEDGDQFGHAVNVTR 222
            M+TSIL++GA+GRTGQ+ I AA  H   PQ+HAF RNP SL   +  +C SVQKGDAL  + V +AL+A+ ATH+VV+IGVPN  ++S+LR DSA AI EA+ + +  VK +++S++GAGG+ I+ GFGIGM    +LR+V++DHD QE+ F K ++  ++ LLI+RPT L +GQ GAK++ FDGQ  +PS   DR D+A W++ Q+C DGD+FG AV++T+
Sbjct:    1 MTTSILVLGASGRTGQQFINAAYDHPDHPQVHAFARNPQSLPSDIAEKCTSVQKGDALLTDQVYDALVATEATHIVVSIGVPNSAAQSTLRYDSAVAIIEAMRRYKHTVKTIIVSALGAGGSKIQFGFGIGMFYYFILRHVMRDHDRQEDTFDKYYQENKKGLLILRPTLLVDGQDGAKVLLFDGQGHTPSKTVDRYDMAVWVVNQICGDGDRFGEAVHITK 222          
BLAST of Ggra9018.t1 vs. uniprot
Match: A0A2V3IUE0 (NAD(P)-bd_dom domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IUE0_9FLOR)

HSP 1 Score: 249 bits (635), Expect = 1.630e-80
Identity = 116/222 (52.25%), Postives = 164/222 (73.87%), Query Frame = 0
Query:    1 MSTSILIIGANGRTGQKLIQAASAHESAPQIHAFVRNPDSLSPSLTSQCNSVQKGDALNAEDVRNALLASNATHVVVAIGVPNDLSESSLRTDSAKAITEALGKLERKVKVVVLSSIGAGGTAIKIGFGIGMIVCAMLRNVLKDHDGQEECFSKSFENKEEDLLIVRPTSLTEGQGGAKLVTFDGQKKSPSSKTDRQDLAEWIITQVCEDGDQFGHAVNVTR 222
            M+TSIL+IGA GRTGQ+LI+AA+ H   PQ+HAF RNP S    +  +C SVQKGDAL A+ V +AL+A+ ATH+V+AIGVPN  + S+LR DSA+AI EA+ +  + VK V++S++GA  T I+ GFG+GM++  +LR++LKDHD QE  F   + + E+ LLIVRPT L +GQ G+K++ FDGQ ++PS   DR D+A W++ Q+  DGD FG A+N+++
Sbjct:    1 MTTSILVIGATGRTGQQLIKAANEHPDHPQVHAFARNPQSFPSEIAEKCTSVQKGDALVADQVYDALVATKATHIVIAIGVPNSTAPSTLRGDSAEAIIEAMKRYPKPVKTVIISALGASDTKIQFGFGVGMVIYYILRHLLKDHDRQEASFLDYYNDNEKGLLIVRPTGLVDGQEGSKVLLFDGQGRTPSLTVDRYDMAAWVVNQIANDGDCFGKAINISK 222          
BLAST of Ggra9018.t1 vs. uniprot
Match: R7QF13 (NAD(P)-bd_dom domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QF13_CHOCR)

HSP 1 Score: 165 bits (418), Expect = 1.220e-47
Identity = 91/222 (40.99%), Postives = 139/222 (62.61%), Query Frame = 0
Query:    2 STSILIIGANGRTGQKLIQAASAHESAPQIHAFVRNPDSLSPSLTSQCNSVQKGDALNAEDVRNALLASNATHVVVAIGVPNDLSESSLRTDSAKAITEAL--GKLERKVKVVVLSSIGAGGTAIKIGFGIGMIVCAMLRNVLKDHDGQEECFSKSFENKEEDLLIVRPTSLTEGQGGAKLVTFDGQKKSPSSKTDRQDLAEWIITQVCEDGDQFGHAVNVT 221
            S  +L+IGA G  G++LI+AAS+  S   +HAF R P  LS S  S C S+ +GDA ++ DVR AL+++ A+  ++ IG     + + +R  +AKA+ + +  G+    VKV+V+SS GAGGT I IGFGIGM+V  +LR+V+KDH  QE  F +   +K   +LIVRPT LT+G+      TF+   K P+   DR+DLA++++ ++      +G  ++VT
Sbjct:    3 SQQVLLIGATGSLGRQLIRAASS-SSGVTLHAFCRTPSKLSASDASSCASIVRGDARSSSDVRRALVSTKASVAIMCIGEGTSTAPTDVREATAKALMDVIEPGQDLDHVKVMVVSSTGAGGTKIDIGFGIGMVVAYVLRHVMKDHTEQERVFKQRIGDKSR-MLIVRPTGLTDGKATGHTTTFEKHSKPPTVHIDREDLAKFMVGEINRGAKAYGKEISVT 222          
BLAST of Ggra9018.t1 vs. uniprot
Match: S0F2U9 (NAD(P)-bd_dom domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=S0F2U9_CHOCR)

HSP 1 Score: 164 bits (414), Expect = 4.730e-47
Identity = 88/220 (40.00%), Postives = 138/220 (62.73%), Query Frame = 0
Query:    4 SILIIGANGRTGQKLIQAASAHESAPQIHAFVRNPDSLSPSLTSQCNSVQKGDALNAEDVRNALLASNATHVVVAIGVPNDLSESSLRTDSAKAITEALGKLER--KVKVVVLSSIGAGGTAIKIGFGIGMIVCAMLRNVLKDHDGQEECFSKSFENKEEDLLIVRPTSLTEGQGGAKLVTFDGQKKSPSSKTDRQDLAEWIITQVCEDGDQFGHAVNVT 221
            ++L+IG NG+TG ++I+A +A  + P +HAF R P  LS S  + C SV +GDA +AED+  AL  +    VVVA+G   DL  + +R  SAKA+ +++   E+  +VK+VV+SS+GAGGT + IGFGIGM++   L++VL DHD QE+       +++   L++  T LT GQ   ++  F+G  K P  + DR  +A +I+ ++C     FG A+++T
Sbjct:    5 TLLVIGGNGQTGVEVIRACAASAAKPPVHAFCRTPSKLSESDAAHCVSVIEGDARSAEDIARALEQAKPDAVVVAVGRSEDLGPTDVRAASAKALMDSVAPGEKFDQVKIVVVSSVGAGGTKLHIGFGIGMLLGMRLKHVLADHDRQEKEIWDRLADQKNRALVLHTTGLTTGQPAGEVCIFEG--KIPHPRIDRAVVARFIVAELCGTCPNFGKAISIT 222          
BLAST of Ggra9018.t1 vs. uniprot
Match: B5Y5A0 (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B5Y5A0_PHATC)

HSP 1 Score: 159 bits (403), Expect = 2.210e-45
Identity = 94/224 (41.96%), Postives = 138/224 (61.61%), Query Frame = 0
Query:    2 STSILIIGANGRTGQKLIQAASAHESAPQIHAFVRNPDSLSPSLTSQCNSVQKGDALNAEDVRNALLASNATHVVVAIGVPNDLSESSLRTDSAKAITEALGKLE--RKVKVVVLSSIGAGGTAIKIGFGIGMIVCAMLRNVLKDHDGQEECFSKSFENKEEDLLIVRPTSLTEGQGGAKLVTFDGQKKSPSSKTDRQDLAEWIITQVCEDGDQF--GHAVNVT 221
            S SIL+IGA GRTG + ++  +A    P IHAF RN   LS +  ++C S+ +GDA +A+++  AL  S+AT V+++IG  + +  + +RT S KA+ + L KL   +KV+ +V+SS GAG + I +G GIG ++   LR++LKDH  QE  F  S  N+     IVR ++LT+     KLV     +K+ + KTDR DLA WI+ Q+C+  D    G AVNVT
Sbjct:    4 SQSILVIGATGRTGLECVRQFAALSPNPFIHAFCRNKSKLSIADQNRCTSIIEGDARSADNLERALADSSATDVILSIGNGDSIKRTDIRTASGKALVQVL-KLPAYKKVRTLVISSSGAGSSQIVVGMGIGKLISFHLRHILKDHTDQEAAFY-SIRNR---TTIVRASALTDNAATGKLVEHGDHEKALTIKTDRADLAAWIVNQICDTDDSLALGRAVNVT 222          
BLAST of Ggra9018.t1 vs. uniprot
Match: A0A1Z5JCD0 (NAD(P)-bd_dom domain-containing protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JCD0_FISSO)

HSP 1 Score: 146 bits (369), Expect = 3.250e-40
Identity = 82/205 (40.00%), Postives = 126/205 (61.46%), Query Frame = 0
Query:    4 SILIIGANGRTGQKLIQAASAHESAPQIHAFVRNPDSLSPSLTSQCNSVQKGDALNAEDVRNALLASNATHVVVAIGVPNDLSESSLRTDSAKAITEALGKLE-RKVKVVVLSSIGAGGTAIKIGFGIGMIVCAMLRNVLKDHDGQEECFSKSFENKEEDLLIVRPTSLTEGQGGAKLVTFDGQKKSPSSKTDRQDLAEWIITQV 207
            S+L++GA+G TG   ++A S  ++  ++H F RNP  L PS+ + C SV  G+A    D+ +AL++SNA  +++AIG    +++  +R  SAK I   L +   + ++VVV+SS GAG + I +G GIG ++   LR++L DH  QE  F +S E +     +VR T+LT+ +   KLVTF   +KSPS  TDR DLA WI+  +
Sbjct:   14 SVLVVGASGLTGVACVRALS-QKAGTKVHGFCRNPTKLDPSVRALCTSVIAGNAREERDIESALISSNANWIIIAIGNGESVAKDDIRAVSAKVIHNVLLQPAFQHIRVVVVSSTGAGPSKIIVGMGIGQLITFYLRHILVDHSEQEAVF-RSPELRSR-TTVVRATALTDNRATGKLVTFGDTQKSPSIHTDRADLANWIVEDI 215          
BLAST of Ggra9018.t1 vs. uniprot
Match: A0A6U3ETT7 (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A6U3ETT7_9STRA)

HSP 1 Score: 102 bits (253), Expect = 7.320e-24
Identity = 60/143 (41.96%), Postives = 89/143 (62.24%), Query Frame = 0
Query:   85 LSESSLRTDSAKAITEALGK-----LERKVKVVVLSSIGAGGTAIKIGFGIGMIVCAMLRNVLKDHDGQEECFSKSFENKEEDLLIVRPTSLTEGQGGAK-LVTFDGQKKSPSSKTDRQDLAEWIITQVCEDGDQFGHAVNVT 221
            +S+S +RT +A+A+ + LGK     +   V+V+ +SS GAGG+ IK+G GIG ++   LR+VL+DH+GQEE      +     + IVRPT+L EG    + L+ F    KSP+ +TDR DLA+W++ +V   G   G  VNVT
Sbjct:    1 VSKSDIRTANAQALVQVLGKKNQESMPENVRVIAVSSTGAGGSRIKVGMGIGKMIEHHLRHVLRDHNGQEEALQALPQGV---VTIVRPTALGEGAPTMQALLEFGDLDKSPTIQTDRADLADWVVQEVAT-GKHKGQKVNVT 139          
BLAST of Ggra9018.t1 vs. uniprot
Match: A0A3C1PL63 (Nucleoside-diphosphate sugar epimerase n=1 Tax=Bacteroidales bacterium TaxID=2030927 RepID=A0A3C1PL63_9BACT)

HSP 1 Score: 85.1 bits (209), Expect = 9.400e-17
Identity = 61/203 (30.05%), Postives = 105/203 (51.72%), Query Frame = 0
Query:    5 ILIIGANGRTGQKLIQAASAHESAPQIHAFVRNPDSLSPSLTSQCNSVQKGDALNAEDVRNALLASNATHVVVAIGVPNDLSESSLRTDSAKAITEALGKLERKVKVVVLSSIGAGGTAIKIGFGIGMIVCAMLRNVLKDHDGQEECFSKSFENKEEDLLIVRPTSLTEGQGGAKLVTFDGQKKSPSSKTDRQDLAEWIITQV 207
            IL++GA+G+TG ++++ A A      + A VRNP  +   LT+    V + D  N    +         HV++A+G  N L +S+LR+     +  AL K  +  ++ V+SS+GAG +  ++ F + + + A+LRNV+KDH+ QE     S  +      IVRPT LT+            + K  + +  R D+A +I++ +
Sbjct:    3 ILLVGASGKTGTEIMKQALAANH--HVIAAVRNPSKI--ELTNPLLQVIETDVTNIASFQAIFENHQFDHVIIALG-NNALGKSTLRSGGTANVLAALKKSGKSARIWVISSVGAGSSRKQLPFLLRITMLAILRNVIKDHELQENLVQSSGFS----FTIVRPTGLTDLPVTGNYTALS-EGKLATGQIPRADVAHFIVSNL 195          
The following BLAST results are available for this feature:
BLAST of Ggra9018.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 17
Match NameE-valueIdentityDescription
A0A2V3J3X27.340e-9163.06NAD(P)-bd_dom domain-containing protein n=1 Tax=Gr... [more]
A0A2V3INI87.870e-8660.36NAD(P)-bd_dom domain-containing protein n=1 Tax=Gr... [more]
A0A2V3IUG34.030e-8152.25NAD(P)-bd_dom domain-containing protein n=1 Tax=Gr... [more]
A0A2V3IUE01.630e-8052.25NAD(P)-bd_dom domain-containing protein n=1 Tax=Gr... [more]
R7QF131.220e-4740.99NAD(P)-bd_dom domain-containing protein n=1 Tax=Ch... [more]
S0F2U94.730e-4740.00NAD(P)-bd_dom domain-containing protein n=1 Tax=Ch... [more]
B5Y5A02.210e-4541.96Predicted protein n=1 Tax=Phaeodactylum tricornutu... [more]
A0A1Z5JCD03.250e-4040.00NAD(P)-bd_dom domain-containing protein n=2 Tax=Fi... [more]
A0A6U3ETT77.320e-2441.96Hypothetical protein n=1 Tax=Amphiprora paludosa T... [more]
A0A3C1PL639.400e-1730.05Nucleoside-diphosphate sugar epimerase n=1 Tax=Bac... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.720coord: 2..216
e-value: 5.5E-24
score: 86.8
NoneNo IPR availablePANTHERPTHR15020FLAVIN REDUCTASE-RELATEDcoord: 2..220
NoneNo IPR availableTMHMMTMhelixcoord: 111..133
IPR016040NAD(P)-binding domainPFAMPF13460NAD_binding_10coord: 9..207
e-value: 2.5E-22
score: 79.7
IPR036291NAD(P)-binding domain superfamilySUPERFAMILY51735NAD(P)-binding Rossmann-fold domainscoord: 3..221

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000860_piloncontigtig00000860_pilon:1165801..1166472 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra9018.t1Ggra9018.t1Gracilaria gracilis GNS1m malemRNAtig00000860_pilon 1165801..1166472 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra9018.t1 ID=Ggra9018.t1|Name=Ggra9018.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=224bp
MSTSILIIGANGRTGQKLIQAASAHESAPQIHAFVRNPDSLSPSLTSQCN
SVQKGDALNAEDVRNALLASNATHVVVAIGVPNDLSESSLRTDSAKAITE
ALGKLERKVKVVVLSSIGAGGTAIKIGFGIGMIVCAMLRNVLKDHDGQEE
CFSKSFENKEEDLLIVRPTSLTEGQGGAKLVTFDGQKKSPSSKTDRQDLA
EWIITQVCEDGDQFGHAVNVTRG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR016040NAD(P)-bd_dom
IPR036291NAD(P)-bd_dom_sf