Ggra8899.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra8899.t1
Unique NameGgra8899.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length215
Homology
BLAST of Ggra8899.t1 vs. uniprot
Match: A0A2V3J4G3 (Prefoldin subunit 3 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J4G3_9FLOR)

HSP 1 Score: 291 bits (745), Expect = 1.560e-97
Identity = 147/209 (70.33%), Postives = 173/209 (82.78%), Query Frame = 0
Query:    6 KAAEQAKENDVLVSTPVTEDFHHGIPTAIFFEDIPEVVEKHNAPLLIDKLSNLSQRYRFFEEKLVKSRDSLEEKVAEVRRALKAVQSLAERSSRAGENAKDIETHFELSDGIYAKASIPPTNKVCLWLGANVMVEYSHEEAKALLSKNLANVEKSYEETCSDISYLRDQLNTTDVNLSRVYNHHVQAMRTAPKNSKPAKTGVTVPLQAK 214
            K +  +K  + +VS PV E  HHGIP A+F +DIP+VVE+H+APLLI+KLS LSQRYRFFEE LVK+RDSLEEK+AE RRALKAVQ LA+RSS +GEN KDIETHFELSDGI+AKA IP TNKVCLWLGANVMVEY+H+EA  LLSKNL+N++ S +ET +DISYLRDQLNTTDVNLSRVYN H+QAMR+  KN + A  G    L+AK
Sbjct:    6 KESSASKAKEAVVSIPVGESVHHGIPKAVFLDDIPKVVEEHSAPLLIEKLSQLSQRYRFFEENLVKNRDSLEEKIAEGRRALKAVQCLAKRSSNSGENTKDIETHFELSDGIFAKARIPATNKVCLWLGANVMVEYTHDEATTLLSKNLSNIQMSLDETNADISYLRDQLNTTDVNLSRVYNQHIQAMRSVGKNGRSANQGKGTSLKAK 214          
BLAST of Ggra8899.t1 vs. uniprot
Match: R7QFV6 (Prefoldin subunit 3 n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QFV6_CHOCR)

HSP 1 Score: 243 bits (621), Expect = 1.040e-78
Identity = 120/193 (62.18%), Postives = 155/193 (80.31%), Query Frame = 0
Query:   15 DVLVSTPVTEDFHHGIPTAIFFEDIPEVVEKHNAPLLIDKLSNLSQRYRFFEEKLVKSRDSLEEKVAEVRRALKAVQSLAERSSRAGENAKDIETHFELSDGIYAKASIPPTNKVCLWLGANVMVEYSHEEAKALLSKNLANVEKSYEETCSDISYLRDQLNTTDVNLSRVYNHHVQAMRTAPKNSKPAKTGV 207
            D +V+ P + + HHGIPTA+FF+D+  +  K+ A  LIDKLS LSQ+YRFFEEKL+KSRD+L EK+AEV+RALKAV SL E+S+R+G+N+ DIET FELSDGIY +A +PP+  VCLWLGAN+MVEYS++EA  LL+KNL + + +  ET +DISYLRDQLNTTD+NLSRVYNHHVQ++R A      +KT +
Sbjct:   16 DSVVTIPNSGEKHHGIPTAVFFDDVASLAVKNTATGLIDKLSALSQKYRFFEEKLLKSRDTLGEKIAEVQRALKAVTSLEEKSTRSGDNSSDIETQFELSDGIYVQAVVPPSRAVCLWLGANIMVEYSYKEAITLLTKNLGSAQTNLAETNADISYLRDQLNTTDINLSRVYNHHVQSVRKAAAQGSASKTAI 208          
BLAST of Ggra8899.t1 vs. uniprot
Match: V4B4G6 (Prefoldin subunit 3 n=1 Tax=Lottia gigantea TaxID=225164 RepID=V4B4G6_LOTGI)

HSP 1 Score: 138 bits (348), Expect = 9.390e-38
Identity = 74/177 (41.81%), Postives = 112/177 (63.28%), Query Frame = 0
Query:   27 HHGIPTAIFFEDIPEVVEKH---NAPLLIDKLSNLSQRYRFFEEKLVKSRDSLEEKVAEVRRALKAVQSLAERSSRAGENAKDIETHFELSDGIYAKASIPPTNKVCLWLGANVMVEYSHEEAKALLSKNLANVEKSYEETCSDISYLRDQLNTTDVNLSRVYNHHVQAMRTAPKNS 200
            H GIP + F +++ E ++K    NA  ++ KL     +Y+F E  L   +  L+ ++ +++ +L  V+ L ER +    NA  +ET F LSD +YAKA IPPT+KVCLWLGANVM+EY+ ++A+ LL KNL   +K+  +   D+S+LRDQ  T +VN++RVYN  V+  + AP  S
Sbjct:   13 HSGIPESDFVDNVDEFMQKQENENAESVLRKLDERHNKYKFMEYNLNTKKSRLKTQIPDIKTSLDIVKHLLERKT----NADPLETRFLLSDQVYAKAKIPPTDKVCLWLGANVMLEYNLDDAQKLLEKNLGTAKKTLGQVDDDLSFLRDQTTTLEVNMARVYNWDVKRRQKAPVKS 185          
BLAST of Ggra8899.t1 vs. uniprot
Match: A0A6A0H2Q7 (Prefoldin subunit 3 n=1 Tax=Hyalella azteca TaxID=294128 RepID=A0A6A0H2Q7_HYAAZ)

HSP 1 Score: 138 bits (348), Expect = 1.180e-37
Identity = 78/190 (41.05%), Postives = 112/190 (58.95%), Query Frame = 0
Query:   18 VSTPVTEDFHHGIPTAIFFEDIPEVVEKHN--APLLIDKLSNLSQRYRFFEEKLVKSRDSLEEKVAEVRRALKAVQSLAERSSRAGENAKDIETHFELSDGIYAKASIPPTNKVCLWLGANVMVEYSHEEAKALLSKNLANVEKSYEETCSDISYLRDQLNTTDVNLSRVYNHHVQAMRT-APKNSKPAK 204
            V  P   D   GIP A F ED+ E + K    A  +I +L     +YRF E  L  +R  L+ +V +++  L+ ++ +  R     ++ +D+ET F LSD +Y KA IPP+NKVCLWLGANVM+EY  E A+ LL+KNL N    + +  +D+ +LR Q  TT+V ++RVYN  V+  R  A K+SK  K
Sbjct:    7 VKVPEKGDNLRGIPEAQFVEDVEEFMSKETGGAEEVIRRLDEQLSKYRFMESHLTATRTKLKHQVPDIKSCLQIIEEMKARQ----DSIEDLETRFLLSDQVYVKAKIPPSNKVCLWLGANVMLEYDLEAAETLLNKNLQNANTKHNQVLNDLDFLRTQCTTTEVTIARVYNWDVRRRRAEAAKSSKQQK 192          
BLAST of Ggra8899.t1 vs. uniprot
Match: A0A2D0RCN4 (Prefoldin subunit 3 n=2 Tax=Ictaluridae TaxID=7996 RepID=A0A2D0RCN4_ICTPU)

HSP 1 Score: 137 bits (345), Expect = 3.540e-37
Identity = 68/168 (40.48%), Postives = 109/168 (64.88%), Query Frame = 0
Query:   27 HHGIPTAIFFEDIPEVVEK---HNAPLLIDKLSNLSQRYRFFEEKLVKSRDSLEEKVAEVRRALKAVQSLAERSSRAGENAKDIETHFELSDGIYAKASIPPTNKVCLWLGANVMVEYSHEEAKALLSKNLANVEKSYEETCSDISYLRDQLNTTDVNLSRVYNHHVQ 191
            H GIP A+F ED+   ++K     A +++ KL    Q+Y++ E  LV+ +  L+ ++ ++++ L+ ++ + E+     +    +ETHF L+D +Y KAS+PPT+KVCLWLGANVM+EY  +EA+ LL KNL    ++ E    D+ +LRDQ  TT+VN++RVYN  V+
Sbjct:   18 HLGIPEAVFVEDVDSFMKKPGNDTADVVLRKLDEQYQKYKYMEVNLVQKKMRLKNQIPQIKQTLEILRHMQEKR----DTTDPMETHFLLADNVYCKASVPPTDKVCLWLGANVMLEYDIDEAQTLLEKNLGTASRNLESLEEDLDFLRDQFTTTEVNMARVYNWDVK 181          
BLAST of Ggra8899.t1 vs. uniprot
Match: A0A671DLF8 (Prefoldin subunit 3 n=25 Tax=Amniota TaxID=32524 RepID=A0A671DLF8_RHIFE)

HSP 1 Score: 137 bits (345), Expect = 3.740e-37
Identity = 68/169 (40.24%), Postives = 112/169 (66.27%), Query Frame = 0
Query:   26 FHHGIPTAIFFEDIPEVVEK---HNAPLLIDKLSNLSQRYRFFEEKLVKSRDSLEEKVAEVRRALKAVQSLAERSSRAGENAKDIETHFELSDGIYAKASIPPTNKVCLWLGANVMVEYSHEEAKALLSKNLANVEKSYEETCSDISYLRDQLNTTDVNLSRVYNHHVQ 191
            +H GIP A+F ED+   +++     A +++ KL    Q+Y+F E  L + +  L+ ++ E+++ L+ ++ + ++     E++  +ET F L+D +Y KAS+PPT+KVCLWLGANVM+EY  +EA+ALL KNL+   K+ +    D+ +LRDQ  TT+VN++RVYN  V+
Sbjct:   21 YHLGIPEAVFVEDVDSFMKQPGNETADVVLKKLDEQYQKYKFMELNLAQKKRRLKGQIPEIKQTLEILKYMQKKK----ESSSSLETRFLLADNLYCKASVPPTDKVCLWLGANVMLEYDIDEAQALLEKNLSTATKNLDSLEEDLDFLRDQFTTTEVNMARVYNWDVK 185          
BLAST of Ggra8899.t1 vs. uniprot
Match: A0A7R9XLT4 (Hypothetical protein (Fragment) n=1 Tax=Argulus foliaceus TaxID=509924 RepID=A0A7R9XLT4_9CRUS)

HSP 1 Score: 136 bits (343), Expect = 6.130e-37
Identity = 71/180 (39.44%), Postives = 111/180 (61.67%), Query Frame = 0
Query:   27 HHGIPTAIFFEDIPEVVEKH----NAPLLIDKLSNLSQRYRFFEEKLVKSRDSLEEKVAEVRRALKAVQSLAERSSRAGENAKDIETHFELSDGIYAKASIPPTNKVCLWLGANVMVEYSHEEAKALLSKNLANVEKSYEETCSDISYLRDQLNTTDVNLSRVYNHHVQAMRTAPKNSKP 202
            H GIP A+F ED+ + ++      NA +++  L     +YRF E  L+  +  L+ ++ ++R++L+ VQ L +R     E  +D  T F LS+ +Y  A +PPT+KVCLWLGANVM+EY+  +A+ALL KNL    K+ +E   D+ +L+DQ  TT+VN++RVYN  V+  ++   N  P
Sbjct:   15 HRGIPDAVFVEDVDQFMKSSENDKNADVVLRNLEEKYSKYRFMESNLLAKKRRLKNQIPDIRKSLEIVQQLRKRM----EANEDCNTQFLLSEQVYVSAKVPPTSKVCLWLGANVMLEYTLNDAEALLEKNLQTAGKNLKEIEDDLDFLKDQCTTTEVNMARVYNWDVKHKQSLKLNPSP 190          
BLAST of Ggra8899.t1 vs. uniprot
Match: A0A4W5MQ47 (Prefoldin subunit 3 n=7 Tax=Salmonidae TaxID=8015 RepID=A0A4W5MQ47_9TELE)

HSP 1 Score: 136 bits (342), Expect = 9.980e-37
Identity = 68/172 (39.53%), Postives = 111/172 (64.53%), Query Frame = 0
Query:   23 TEDFHHGIPTAIFFEDIPEVVEK---HNAPLLIDKLSNLSQRYRFFEEKLVKSRDSLEEKVAEVRRALKAVQSLAERSSRAGENAKDIETHFELSDGIYAKASIPPTNKVCLWLGANVMVEYSHEEAKALLSKNLANVEKSYEETCSDISYLRDQLNTTDVNLSRVYNHHVQ 191
            T+  H GIP AIF ED+   +++     A  ++ KL    Q+Y++ E  L + +  L+ ++ ++++ L+ ++ + ++     E    +ETHF L+D +Y KAS+PPT+KVCLWLGANVM+EY  +EA++LL KNLA   ++ +    D+ +LRDQ  TT+VN++RVYN  V+
Sbjct:   14 TKKKHLGIPEAIFVEDVESFMKQPGNDTADAVLRKLDEQYQKYKYMELNLAQKKQRLKSQIPQIKQTLEILRHMQKKK----ETTDPMETHFLLADNVYCKASVPPTDKVCLWLGANVMLEYDIDEAQSLLEKNLATASRNLDSLEEDLDFLRDQFTTTEVNMARVYNWDVK 181          
BLAST of Ggra8899.t1 vs. uniprot
Match: A0A0G4H4C7 (Prefoldin subunit 3 n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4H4C7_VITBC)

HSP 1 Score: 136 bits (342), Expect = 1.220e-36
Identity = 72/178 (40.45%), Postives = 114/178 (64.04%), Query Frame = 0
Query:   30 IPTAIFFEDIPEVVEKHNAPLLIDKLSNLSQRYRFFEEKLVKSRDSLEEKVAEVRRALKAVQSLAERSSRAGENAKDIETHFELSDGIYAKASIPPTNKVCLWLGANVMVEYSHEEAKALLSKNLANVEKSYEETCSDISYLRDQLNTTDVNLSRVYNH--HVQAMRTAPKNSKPAKT 205
            IP A+F ED+ + +   N   +   L+ L Q+YRF EE+  K + +L+EK+ E++ A+  ++ L +R      + + +ETH++L+D IYA+AS+PPT  VCLWLGANVM+EY  ++A ALL +NL     S ++   D+ +LRDQ  TT+VN++RV+NH  H++A   A   ++   T
Sbjct:   19 IPKAVFIEDVEDYIGPANPLEVHRNLNELLQKYRFMEEEFGKKQRALQEKLPEIKEAITVIKFLKDRRG----HDEPLETHYQLADCIYAEASVPPTETVCLWLGANVMLEYPLDDALALLEQNLNTAAASLKDLGDDLDFLRDQRTTTEVNVARVHNHMVHIKAKVLAQAQTQAQST 192          
BLAST of Ggra8899.t1 vs. uniprot
Match: A0A8J8P1K2 (Uncharacterized protein n=1 Tax=Halteria grandinella TaxID=5974 RepID=A0A8J8P1K2_HALGN)

HSP 1 Score: 135 bits (341), Expect = 1.300e-36
Identity = 79/191 (41.36%), Postives = 122/191 (63.87%), Query Frame = 0
Query:   17 LVSTPVTE--DFHHGIPTAIFFEDIPEVVEKHNAPLLIDKLSNLSQRYRFFEEKLVKSRDSLEEKVAEVRRALKAVQSLAERSSRAGENAKDIETHFELSDGIYAKASIP-PTNKVCLWLGANVMVEYSHEEAKALLSKNLANVEKSYEETCSDISYLRDQLNTTDVNLSRVYNHHVQAMRTAPKNSKPAK 204
            L   P+TE  D    IP AIF ++    VEK+    LI  ++ L Q+Y+F E +L++ R+SL  K  ++++ L+ V+ L ++     E  + ++T+F +SD ++AKA+IP  T +V LWLGANVMVEYS+EEA ALL +NL+N E   + T  D+++L+DQ+ TT+VN++R YN  V A     K ++ AK
Sbjct:    7 LKQIPLTEASDNPRKIPQAIFIDNTEAWVEKYGGDELIANMNELYQKYKFMENQLIRGRESLRVKTPDIKKTLEMVRMLKDKH----EKEESLQTNFLISDNVWAKATIPNQTGRVGLWLGANVMVEYSYEEALALLERNLSNAEIRIKSTEEDLNFLKDQITTTEVNIARCYNQTV-ANNQKTKQAEVAK 192          
The following BLAST results are available for this feature:
BLAST of Ggra8899.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J4G31.560e-9770.33Prefoldin subunit 3 n=1 Tax=Gracilariopsis chorda ... [more]
R7QFV61.040e-7862.18Prefoldin subunit 3 n=1 Tax=Chondrus crispus TaxID... [more]
V4B4G69.390e-3841.81Prefoldin subunit 3 n=1 Tax=Lottia gigantea TaxID=... [more]
A0A6A0H2Q71.180e-3741.05Prefoldin subunit 3 n=1 Tax=Hyalella azteca TaxID=... [more]
A0A2D0RCN43.540e-3740.48Prefoldin subunit 3 n=2 Tax=Ictaluridae TaxID=7996... [more]
A0A671DLF83.740e-3740.24Prefoldin subunit 3 n=25 Tax=Amniota TaxID=32524 R... [more]
A0A7R9XLT46.130e-3739.44Hypothetical protein (Fragment) n=1 Tax=Argulus fo... [more]
A0A4W5MQ479.980e-3739.53Prefoldin subunit 3 n=7 Tax=Salmonidae TaxID=8015 ... [more]
A0A0G4H4C71.220e-3640.45Prefoldin subunit 3 n=2 Tax=Vitrella brassicaformi... [more]
A0A8J8P1K21.300e-3641.36Uncharacterized protein n=1 Tax=Halteria grandinel... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 66..96
NoneNo IPR availableCDDcd00584Prefoldin_alphacoord: 52..187
e-value: 3.36383E-22
score: 85.7443
NoneNo IPR availableSUPERFAMILY46579Prefoldincoord: 53..184
IPR004127Prefoldin alpha-likePFAMPF02996Prefoldincoord: 63..188
e-value: 1.3E-30
score: 105.8
IPR016655Prefoldin subunit 3PIRSFPIRSF016396Prefoldin_3coord: 15..205
e-value: 8.0E-57
score: 189.8
IPR016655Prefoldin subunit 3PANTHERPTHR12409PREFOLDIN SUBUNIT 3coord: 20..201
IPR009053PrefoldinGENE3D1.10.287.370coord: 51..195
e-value: 8.7E-31
score: 108.6

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000860_piloncontigtig00000860_pilon:745105..745870 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra8899.t1Ggra8899.t1Gracilaria gracilis GNS1m malemRNAtig00000860_pilon 745105..745870 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra8899.t1 ID=Ggra8899.t1|Name=Ggra8899.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=215bp
METISKAAEQAKENDVLVSTPVTEDFHHGIPTAIFFEDIPEVVEKHNAPL
LIDKLSNLSQRYRFFEEKLVKSRDSLEEKVAEVRRALKAVQSLAERSSRA
GENAKDIETHFELSDGIYAKASIPPTNKVCLWLGANVMVEYSHEEAKALL
SKNLANVEKSYEETCSDISYLRDQLNTTDVNLSRVYNHHVQAMRTAPKNS
KPAKTGVTVPLQAK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004127Prefoldin_subunit_alpha
IPR016655PFD3
IPR009053Prefoldin