Ggra8890.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra8890.t1
Unique NameGgra8890.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length892
Homology
BLAST of Ggra8890.t1 vs. uniprot
Match: A0A2V3J5N6 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J5N6_9FLOR)

HSP 1 Score: 1041 bits (2692), Expect = 0.000e+0
Identity = 517/896 (57.70%), Postives = 652/896 (72.77%), Query Frame = 0
Query:    5 SDRNVKILSLLFLLSLLFATLIQYNEQSSFYFEHSIDRVLDGLYSTPVDAEPRLFRSRQT-RKIFLPPSHYQRDRAGAIDVFEKGSSSICRIYRVCRLKNGEVYYPRWMKSHASLLKEKCGLFDLRFAPTKSLKNEFGIPLYYDWLGPNMPTPTLLKFVKNPLSYFFAHKTAKRSMLGGNSTPN--EINRTCIPAPADESGSNISVVCGSRPEGRIAHPVIVVNTDKEQPKAHSDFYRLIRSTYEEKHGEGMAILDPVSKALRRPKLCFRSVIASGTADHLSGFTTRNPADTSQSVSALQWAFKDGINASTQDSPQNNGTDSLMTAENES---LTSGRNYKKNGKGLETLPTFEEFESSQYRSERNESETTIRLETEGGVELFTHRAVDGLQWNTSHTGELSEHVYGICRVYRACLKPDRSIVLPKWMKKSAARLKNHCGIESISFLQDDEFDLMFEKIKLSSRNKRALNPIASQPDMEVFFDLIGTREYRTQKHHFVTDFLIDGIHALDALYNRDDTGMTSFRRRCIYRLDSNVGKEAHEIGTCAHGPMNIDDLKPLLLVDNRFRSRSIHGKFIRQLAAMMPPKNNKGPEFIQGSELSKSGHKQSTCFRSIVVTRNAYPPSSILEATERNIFFTQNNISRDTPKPIVEGECKVRVALIPAQKLSKVNAWAKGEGELANEGDIISAIKTVGHSMAQQGASK---VKIEVKRVKRVGHDLVEDKMMIQQSEVIISPNNPSLTSIMFARPNTLVVEVQPFSYAAGPYRSFAGAFRLGYRSIMANPDYETFEKCVNDNFKMDWTRNISKAELEANKKGLLNLYREARDSFNGTVSELHLERQATERGVMRKFYIPKERVCARAQRLKVDANLVAIIVGKHAASLCDGHAEETSRLEAVL 891
            S+R +K L+LLFL  L+  T ++ N+  + + E S+DRVL    + PVDAE      RQ  RK+FLPP++YQRDR GAID+FEK  +S+CRIY+VCR+KNG+VYYPRWMK H S+L+EKCGL +L FAP KSLKNEFG P+YYDWLGPN+ TP LLKF KNP S+FFAHK A +S+L  N   N   + RTCIPAP     S++S VC S+PEG IAHP I+VNT   QPKA SDFY + R TY EKHGE + ILDP S+ LRRP +CFRS+IAS +ADH +GFT  + A T                                    +S   L +   Y     G+  L TF+E+E +Q   E  +     ++E+EGGVELFTHRAVDG  WN S   ELS+HVYGICR+YRAC   D+SIVLP WMK ++ +L+ HCGI+S++FLQDDEFDLM+EK+++SSRN+R LN   SQPDMEVFFDLIG REYR QKHHFVTDFL DGIHALDAL+NRD+TGMTSF+R+CIYR DSNV K A   G CAH P+ ID+L+P+L++++R +S   HGK+IRQLAAMMPPK  +GP  +  SELS+SG+ QSTCFRSIV TRN+YPPSS+L+A ERN+FF QNNISR+T K   EGEC+V V ++  QK  K   W K +GEL NE DI++AI+T+G ++     SK     I V+R+K  G+D+ EDK +IQQS +IIS NNPSLT I+FA+P T+VVEVQPFSY+AGPYRSFAG  +L Y+S+MAN DY+ FE CV D++K DWT N+S +E+EA K+GLL L+R+ARD+FNG  S+LHLE++  ++G +R+F+IP+ERVCARAQRL VDANL+AIIVGK AA+LC  HA+   RL+AVL
Sbjct:    5 SERTLKGLTLLFLTLLILFTFLEQNQTPNLHLEASLDRVLSYFSTVPVDAESETGHRRQEKRKVFLPPAYYQRDRGGAIDIFEKNGASMCRIYKVCRMKNGQVYYPRWMKKHLSILEEKCGLTELNFAPVKSLKNEFGTPMYYDWLGPNLRTPALLKFSKNPTSHFFAHKNATKSLLDTNQNENVSSVRRTCIPAPKHIRKSDMSAVCDSQPEGHIAHPAILVNTIPGQPKAESDFYSVYRRTYMEKHGESVTILDPKSRLLRRPIVCFRSIIASASADHNAGFTAESTAATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQSSRVLNTSTTY-----GM--LNTFDEYEDTQLNGEHGQQHLVHKMESEGGVELFTHRAVDGQSWNNSKQEELSKHVYGICRLYRACRGADQSIVLPNWMKNNSVQLQEHCGIDSLTFLQDDEFDLMYEKVRVSSRNRRLLNSRGSQPDMEVFFDLIGMREYRAQKHHFVTDFLRDGIHALDALFNRDETGMTSFKRQCIYRPDSNVRKAALRDGVCAHAPVKIDELRPVLILNDRMKSSGAHGKYIRQLAAMMPPKKGRGPGILLNSELSRSGYNQSTCFRSIVFTRNSYPPSSVLDAAERNVFFAQNNISRETAKGSGEGECEVHVTMLRPQKHKKSKRWFKNQGELTNEDDIVAAIETLGKAILDDSRSKEQTANIVVRRMKHSGYDIEEDKKLIQQSHIIISTNNPSLTGIVFAKPGTVVVEVQPFSYSAGPYRSFAGTLKLDYQSVMANADYQAFEGCVKDSYKKDWTGNVSASEMEAKKEGLLKLFRDARDNFNGASSDLHLEKRELDKGGLRQFHIPQERVCARAQRLVVDANLIAIIVGKKAAALCQKHAKHRLRLDAVL 893          
BLAST of Ggra8890.t1 vs. uniprot
Match: A0A1X6NXK0 (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NXK0_PORUM)

HSP 1 Score: 70.9 bits (172), Expect = 1.030e-8
Identity = 57/197 (28.93%), Postives = 86/197 (43.65%), Query Frame = 0
Query:  721 IQQSEVIISPNNPSLTSIMFARPNTLVVEVQPFSYAAGPYRSFAGAFRLGYRSIMANPDYETFEKCVNDNFKMDWTRNISKAE-------------------------------LEANKKGLLNLYREARDSFN--GTVSELHLERQATERG-------VMRKFYIPKERVCARAQRLKVDANLVAIIVGKHAASLC 877
            +Q + V+++P +PSL ++++ RP + VVEV PF+Y  G   + A A  + +R ++A PD  TF  CV +  KMD      +A                                ++     LL  +  A D +   G V  L L+ Q   RG          +  +P+ER CARAQRL  D   VA +V   A  +C
Sbjct:  954 LQGAHVVLAPTDPSLGAVLYVRPGSTVVEVSPFAYYGGGVAALAAALGVAHRRVVAPPDSATFRACV-EAVKMDGWGAAGRAATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDGAVAALLAAWDAAADDYAAFGKVDGLRLD-QGVGRGRGVGGGDAGDRLRLPRERECARAQRLAPDPAAVAAVVVAAAVDVC 1148          
The following BLAST results are available for this feature:
BLAST of Ggra8890.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3J5N60.000e+057.70Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A1X6NXK01.030e-828.93Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 801..821
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 308..330
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 28..891
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..27
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 23..27
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 11..22
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..10
NoneNo IPR availableTMHMMTMhelixcoord: 12..29

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000860_piloncontigtig00000860_pilon:661129..663804 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra8890.t1Ggra8890.t1Gracilaria gracilis GNS1m malemRNAtig00000860_pilon 661129..663804 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra8890.t1 ID=Ggra8890.t1|Name=Ggra8890.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=892bp
MLFASDRNVKILSLLFLLSLLFATLIQYNEQSSFYFEHSIDRVLDGLYST
PVDAEPRLFRSRQTRKIFLPPSHYQRDRAGAIDVFEKGSSSICRIYRVCR
LKNGEVYYPRWMKSHASLLKEKCGLFDLRFAPTKSLKNEFGIPLYYDWLG
PNMPTPTLLKFVKNPLSYFFAHKTAKRSMLGGNSTPNEINRTCIPAPADE
SGSNISVVCGSRPEGRIAHPVIVVNTDKEQPKAHSDFYRLIRSTYEEKHG
EGMAILDPVSKALRRPKLCFRSVIASGTADHLSGFTTRNPADTSQSVSAL
QWAFKDGINASTQDSPQNNGTDSLMTAENESLTSGRNYKKNGKGLETLPT
FEEFESSQYRSERNESETTIRLETEGGVELFTHRAVDGLQWNTSHTGELS
EHVYGICRVYRACLKPDRSIVLPKWMKKSAARLKNHCGIESISFLQDDEF
DLMFEKIKLSSRNKRALNPIASQPDMEVFFDLIGTREYRTQKHHFVTDFL
IDGIHALDALYNRDDTGMTSFRRRCIYRLDSNVGKEAHEIGTCAHGPMNI
DDLKPLLLVDNRFRSRSIHGKFIRQLAAMMPPKNNKGPEFIQGSELSKSG
HKQSTCFRSIVVTRNAYPPSSILEATERNIFFTQNNISRDTPKPIVEGEC
KVRVALIPAQKLSKVNAWAKGEGELANEGDIISAIKTVGHSMAQQGASKV
KIEVKRVKRVGHDLVEDKMMIQQSEVIISPNNPSLTSIMFARPNTLVVEV
QPFSYAAGPYRSFAGAFRLGYRSIMANPDYETFEKCVNDNFKMDWTRNIS
KAELEANKKGLLNLYREARDSFNGTVSELHLERQATERGVMRKFYIPKER
VCARAQRLKVDANLVAIIVGKHAASLCDGHAEETSRLEAVL*
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