Ggra888.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Ggra888.t1
Unique Name	Ggra888.t1
Type	polypeptide
Organism	Gracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length	344

Homology

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BLAST of Ggra888.t1 vs. uniprot
Match: A0A2V3ILX8 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ILX8_9FLOR)

HSP 1 Score: 129 bits (325), Expect = 1.400e-32
Identity = 88/207 (42.51%), Postives = 123/207 (59.42%), Query Frame = 0

Query:  104 MTLHRNKNKIKVKGEEKLAAPIRFLSAVILLATCPKFSSKLGGSSRKAS--VKRSPPLMGVEQHGKETSPGSAAVHN--PTSSRPKLSKKQKEKQHMERSIWDVAKSVDAMNQTLKSLAISKKKAASISLQLKKLHRMKLSPEVMNERLEKLMSHAAYLGEFSTGLDMETRSVGQQSIHGCASMSGNRGLIGNTSSYQAANSNETDM 306
            MTL+RN NK K++GE +    IRF+SAV LL+ CPKFS+ +GGSS+ A     +SP  +  +Q     +   A+V    P S+RP  +KK+K ++  ER++  VAKS+DA+ ++++  A +KK AASI+LQLK LHRM      MN R + LM+ AA LG FS+  +M + S  Q             GLIGN SSYQ   S +  M
Sbjct:    1 MTLYRNNNKFKLRGELRTPGVIRFMSAVSLLSECPKFSATIGGSSQSAHGYKPKSPKTIEKQQEQSAAASNFASVSMSAPASNRPFGTKKRKAEEVFERNLCKVAKSMDAITESIRCSATNKKMAASIALQLKILHRMSTPATEMNRRFDDLMNKAALLGGFSSPKEMVSGSSEQNQDD-------TSGLIGNISSYQFNTSMDNQM 200

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BLAST of Ggra888.t1 vs. uniprot
Match: A0A1X6P783 (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P783_PORUM)

HSP 1 Score: 87.8 bits (216), Expect = 1.960e-17
Identity = 50/126 (39.68%), Postives = 76/126 (60.32%), Query Frame = 0

Query:    6 PEITTRGPNFTPDEDLALCREWMSATQSITDHNVEAFWSTVYNAFVSQPEYFWPRTACNLQWRCATVAEHEKKYIAAEELYHSAIPSGETEDQTVQNIMTLHRNKNKIK-VKGEEKLAAPIRFLSA 130
            P    RGP+F P+ED AL R  + A++ + + + E FW  V   +++QPE    +T   L+ R   +    +KY+AAE+LY  +  SGETE  ++ NIMTL++N+NKIK  KGE + A   R ++A
Sbjct:    9 PRRPPRGPSFNPNEDEALARSHVKASERVDEMDKELFWDLVTKTYLTQPEAVTSQTKVALRNRFTWLGRVSQKYLAAEQLYKPS--SGETESDSLANIMTLYQNQNKIKNEKGELRPAPVFRSIAA 132

The following BLAST results are available for this feature:

BLAST of Ggra888.t1 vs. uniprot

BLAST of Ggra888.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A2V3ILX8	1.400e-32	42.51	Uncharacterized protein n=1 Tax=Gracilariopsis cho...	[more]
A0A1X6P783	1.960e-17	39.68	Uncharacterized protein n=1 Tax=Porphyra umbilical...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 314..339
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 148..197

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
tig00000231_pilon	contig	tig00000231_pilon:9379..10410 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria gracilis GNS1m male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Ggra888.t1	Ggra888.t1	Gracilaria gracilis GNS1m male	mRNA	tig00000231_pilon 9379..10410 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Ggra888.t1 ID=Ggra888.t1|Name=Ggra888.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=344bp
MTHPEPEITTRGPNFTPDEDLALCREWMSATQSITDHNVEAFWSTVYNAF
VSQPEYFWPRTACNLQWRCATVAEHEKKYIAAEELYHSAIPSGETEDQTV
QNIMTLHRNKNKIKVKGEEKLAAPIRFLSAVILLATCPKFSSKLGGSSRK
ASVKRSPPLMGVEQHGKETSPGSAAVHNPTSSRPKLSKKQKEKQHMERSI
WDVAKSVDAMNQTLKSLAISKKKAASISLQLKKLHRMKLSPEVMNERLEK
LMSHAAYLGEFSTGLDMETRSVGQQSIHGCASMSGNRGLIGNTSSYQAAN
SNETDMFASNINTTNAVTPHDETRPEEQNESLATVAPDAFHSV*