Ggra8870.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra8870.t1
Unique NameGgra8870.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length72
Homology
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BLAST of Ggra8870.t1 vs. uniprot
Match: R7QGG0 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QGG0_CHOCR)

HSP 1 Score: 64.7 bits (156), Expect = 8.920e-12
Identity = 29/38 (76.32%), Postives = 34/38 (89.47%), Query Frame = 0 
Query:   33 PMQSKLGLVLRNSVGGSIVFGFFLAIGTGIRSCNARER 70
            P+  K GLVLRNSVGGS++FGFFLAIG+GIRSC +RER
Sbjct:   79 PISQKAGLVLRNSVGGSLLFGFFLAIGSGIRSCGSRER 116
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BLAST of Ggra8870.t1 vs. uniprot
Match: M2XT73 (Uncharacterized protein n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2XT73_GALSU)

HSP 1 Score: 53.1 bits (126), Expect = 1.290e-7
Identity = 22/35 (62.86%), Postives = 28/35 (80.00%), Query Frame = 0 
Query:   37 KLGLVLRNSVGGSIVFGFFLAIGTGIRSCNARERY 71
            ++GL LR++VG  + FGFFLA+GTGIR C A ERY
Sbjct:   46 RIGLALRSTVGAGMAFGFFLAVGTGIRGCGAHERY 80
The following BLAST results are available for this feature:
BLAST of Ggra8870.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
R7QGG08.920e-1276.32Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
M2XT731.290e-762.86Uncharacterized protein n=1 Tax=Galdieria sulphura... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 63..71
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 42..62
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..41
NoneNo IPR availableTMHMMTMhelixcoord: 40..62

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000860_piloncontigtig00000860_pilon:584061..592758 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra8870.t1Ggra8870.t1Gracilaria gracilis GNS1m malemRNAtig00000860_pilon 584061..592758 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra8870.t1 ID=Ggra8870.t1|Name=Ggra8870.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=72bp
MTSLSNLAHPLGATIRLASTLYRTIMSRRGCSPMQSKLGLVLRNSVGGSI
VFGFFLAIGTGIRSCNARERY*
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