Ggra8869.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra8869.t1
Unique NameGgra8869.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length175
Homology
BLAST of Ggra8869.t1 vs. uniprot
Match: A0A2V3J889 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J889_9FLOR)

HSP 1 Score: 281 bits (720), Expect = 5.230e-95
Identity = 142/174 (81.61%), Postives = 156/174 (89.66%), Query Frame = 0
Query:    1 MTVGKLDDAEMIARMTEWNDIETWEYSDVEEASADNNLAAAKRFLAAQSFLLSWQEGKVPTRWRRPRKLTDFDGKYPKSIVDEAEDIIAERIAARNMEKTARLNAVLSARKSDSVGDDGKIGDAKQKRTEVDALKADFATFNTEFFEAKNCLTKATSSIAEISFRIQALSEVLK 174
            MTVGKL DAEMIARMTEWN IETWEY+D +EASA+NNLAAAKRFLAAQSFLL+WQEGKVP+RWRRPRKLTDFDGKYPKS+VDEAEDIIAERIA RNMEKTA+LNAVLS R      DD   GD KQK+ ++DALKADFATFN  FFEAKNCLTKAT+++A+ISFRIQALSEVLK
Sbjct:    1 MTVGKLSDAEMIARMTEWNVIETWEYTDNDEASAENNLAAAKRFLAAQSFLLAWQEGKVPSRWRRPRKLTDFDGKYPKSVVDEAEDIIAERIAIRNMEKTAKLNAVLSERAKSMSTDDKVAGDKKQKKMQMDALKADFATFNENFFEAKNCLTKATAAVADISFRIQALSEVLK 174          
BLAST of Ggra8869.t1 vs. uniprot
Match: R7QGC2 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QGC2_CHOCR)

HSP 1 Score: 210 bits (534), Expect = 1.160e-66
Identity = 104/176 (59.09%), Postives = 135/176 (76.70%), Query Frame = 0
Query:    1 MTVGKLDDAEMIARMTEWNDIETWEYSDVEEASADNNLAAAKRFLAAQSFLLSWQEGKVPTRWRRPRKLTDFDGKYPKSIVDEAEDIIAERIAARNMEKTARLNAVLSAR--KSDSVGDDGKIGDAKQKRTEVDALKADFATFNTEFFEAKNCLTKATSSIAEISFRIQALSEVLK 174
            M   +LDD E I RMTEWN+ E WE S+ EE S DNNLAAAKRF+AAQSFLLSW+EGKVPT WRR RK+TDF+G+YPKS++D AED+I+ERIAA+NMEKT RLNA + +R   S          D    + E++ LKA+F+TFN  FFEAK  L++AT++IA++SFR+QA++E+L+
Sbjct:    1 MASEQLDDVEKIVRMTEWNEQEPWECSENEEYSKDNNLAAAKRFMAAQSFLLSWKEGKVPTGWRRARKITDFNGEYPKSVIDSAEDVISERIAAKNMEKTIRLNAAVLSRGESSSEAATKRPPSDVALNKQEIEKLKAEFSTFNLHFFEAKGALSRATTAIADVSFRLQAVTEILE 176          
BLAST of Ggra8869.t1 vs. uniprot
Match: A0A7S0XJ55 (Hypothetical protein n=2 Tax=Erythrolobus madagascarensis TaxID=708628 RepID=A0A7S0XJ55_9RHOD)

HSP 1 Score: 70.1 bits (170), Expect = 7.440e-11
Identity = 39/105 (37.14%), Postives = 62/105 (59.05%), Query Frame = 0
Query:    4 GKLDDAEMIARMTEWNDIETWEYSDVEEASADNNLAAAKRFLAAQSFLLSWQEGKVPTRWRRPRKLTDFDGKYPKSIVDEAEDIIAER---IAARNMEKTARLNA 105
             ++ D  ++ R+   +++  ++    EE  +   L A  RF+AAQ FLL+WQ GKVPT W+RPR++ DF   Y + +V+ A+  + E    IAAR  E+ AR +A
Sbjct:   25 ARVSDEVLVKRIIAASELADFKPYYYEENESGGTLQAM-RFIAAQQFLLAWQHGKVPTGWKRPRRVDDFKEMYGEDVVNMAKARVREHHSEIAAREKERLARFHA 128          
BLAST of Ggra8869.t1 vs. uniprot
Match: A0A5J4YYM0 (Uncharacterized protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YYM0_PORPP)

HSP 1 Score: 67.8 bits (164), Expect = 4.660e-10
Identity = 42/109 (38.53%), Postives = 58/109 (53.21%), Query Frame = 0
Query:    4 GKLDDAEMIARM---TEWNDIETWEYSDVEEASADNNLAAAKRFLAAQSFLLSWQEGKVPTRWRRPRKLTDFDGKYPKSIVDEAEDIIAERIAARNMEKTARLNAVLSA 109
            GK  +  +I RM   +E  D + W Y   EE   D  + A  RF+AAQ FLLSWQ GKVP  W RPR++ DF   Y + +V +A+  +A        ++  RL   L+A
Sbjct:   10 GKATEEVLIMRMVAASELVDHKPWVY---EEKEKDGTMQAM-RFIAAQQFLLSWQTGKVPVGWSRPRRIEDFQDMYGEEVVKKAQARVANHKKELAEKEQIRLTKFLNA 114          
The following BLAST results are available for this feature:
BLAST of Ggra8869.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A2V3J8895.230e-9581.61Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QGC21.160e-6659.09Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A7S0XJ557.440e-1137.14Hypothetical protein n=2 Tax=Erythrolobus madagasc... [more]
A0A5J4YYM04.660e-1038.53Uncharacterized protein n=1 Tax=Porphyridium purpu... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000860_piloncontigtig00000860_pilon:583162..583686 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra8869.t1Ggra8869.t1Gracilaria gracilis GNS1m malemRNAtig00000860_pilon 583162..583686 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra8869.t1 ID=Ggra8869.t1|Name=Ggra8869.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=175bp
MTVGKLDDAEMIARMTEWNDIETWEYSDVEEASADNNLAAAKRFLAAQSF
LLSWQEGKVPTRWRRPRKLTDFDGKYPKSIVDEAEDIIAERIAARNMEKT
ARLNAVLSARKSDSVGDDGKIGDAKQKRTEVDALKADFATFNTEFFEAKN
CLTKATSSIAEISFRIQALSEVLK*
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