Ggra8852.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra8852.t1
Unique NameGgra8852.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length477
Homology
BLAST of Ggra8852.t1 vs. uniprot
Match: A0A2V3ILX7 (WD-40 repeat-containing protein MSI4 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ILX7_9FLOR)

HSP 1 Score: 765 bits (1975), Expect = 3.340e-276
Identity = 358/474 (75.53%), Postives = 403/474 (85.02%), Query Frame = 0
Query:    1 MVANAEPDAQRKRTMPVGSLNRSTRFKLWKEQDVPILYDWISSRPLVWPSAAVQWGAPIEDSRRDRAPNNHTFSNRAIYLSERTGDATRDPNTLLQFEVRVVHELTNKPSEVARPWVEEPAITDRSDTNSSRDFVLRKRILHPGEVNRIRLIARDVVVTHTDSPHLFVWDFKKQQDRKPRDTSPNIPDCTLVGHSSNAEYAIDVAGYSGTEEDKWVVSGGSDCSVLLWRMEDYQSSGQRLSPFVRMTGSNGISKPVGHTEHIEDVSFCGKQRNVIASVGRDEALFLWDVRAPQSPTAYVYKAHKGDINCCDYGGLCENYIVTGGEDKQVRLWDTRKLKGTAGEPQPLRELRGHTEAITNLMWNRNVENVLASGAIDGQVLIWGIGDECSHRQADSPYYDVSPELLFKHVGHSINDENIWDLDWLPSSSDPWCIASLSETVGSGGSVLQVWRISDIIHRPTEEVAADLKRYSRSR 474
            MV NA   + R R   VGSLN S+RFKLWKEQ VP+LYDW+SSRPLVWPSAAVQWGA IEDSRRDRAPNNHTFSN A+YL+ERTG+AT DPNTLLQFE+RVVHE TNKPS+VARPW EE  +TD+SD NSSRDF LRKRI+HPGEVNRIRLI+RDVVVTHTDSPHLFVWDF+KQ DRK R+ S NIPD TL+GHSSNAEYAIDVA   G + DKWV+SGG DC+VLLWRM+DYQSSGQ L+PFVRM GS+GI  PVGHT HIEDVSFCGKQRN ++SVGRD AL LWDVRAPQSPTA+V KAH+GDINCCD+GG+CE +I TGGEDK VR+WDTRKLK T  EPQP+R LRGHT  ITN+MWNRNV NV ASG  DGQVL+W I D    RQA+S +YD SPEL+F+H+GH I D  I DL+WLP SSDPWCIASLSET GSGGS LQVWRISDI++RP EEVAADL++++R R
Sbjct:    1 MVVNAAHRSSR-RPAAVGSLNSSSRFKLWKEQHVPLLYDWLSSRPLVWPSAAVQWGASIEDSRRDRAPNNHTFSNHAVYLAERTGNATTDPNTLLQFEIRVVHEYTNKPSDVARPWAEEAVVTDQSDANSSRDFALRKRIIHPGEVNRIRLISRDVVVTHTDSPHLFVWDFRKQPDRKAREVSHNIPDMTLMGHSSNAEYAIDVANAPGDDGDKWVLSGGKDCAVLLWRMQDYQSSGQFLNPFVRMAGSHGIKNPVGHTGHIEDVSFCGKQRNTVSSVGRDAALLLWDVRAPQSPTAFVNKAHRGDINCCDFGGICEYFIGTGGEDKVVRIWDTRKLKSTNDEPQPVRMLRGHTNEITNIMWNRNVSNVCASGGDDGQVLVWKIEDTQLQRQAESQHYDASPELIFRHIGHGIADAKISDLEWLPCSSDPWCIASLSETFGSGGSTLQVWRISDIVYRPKEEVAADLRQFARGR 473          
BLAST of Ggra8852.t1 vs. uniprot
Match: R7QKR8 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QKR8_CHOCR)

HSP 1 Score: 528 bits (1360), Expect = 1.070e-182
Identity = 249/468 (53.21%), Postives = 321/468 (68.59%), Query Frame = 0
Query:   16 PVGSLNRSTRFKLWKEQDVPILYDWISSRPLVWPSAAVQWGA--PIEDSRRDRA--PNNHTFSNRAIYLSERTGDATRDPNTLLQFEVRVVHELTNKPSEVARPWVEEPAITDRSDTNSSRDFVLRKRILHPGEVNRIRLIARDVVVTHTDSPHLFVWDFKKQQDRKPRDTSPNIPDCTLVGHSSNAEYAIDVA-----GYSGTEEDKWVVSGGSDCSVLLWRMEDYQSSGQRLSPFVRMTGSNGISKPVGHTEHIEDVSFCGKQRNVIASVGRDEALFLWDVRAPQSPTAYVYKAHKGDINCCDYGGLCENYIVTGGEDKQVRLWDTRKLKGTAGEPQPLRELRGHTEAITNLMWNRNVENVLASGAIDGQVLIWGIGDECSHRQADSPYYDVSPELLFKHVGHSINDENIWDLDWLPSSSDPWCIASLSETVGSGGSVLQVWRISDIIHRPTEEVAADLKRYSRSR 474
            PVGSLN   RF++WK+Q VP+LYDW+SSR LVWP  A++WGA  P E+  R+R    N      RA+YL+ERTG +  DPNTLL F+V+V  EL+ KP ++A+PW+ E  + +R+D  S+R F LRKRI+HPGEVNRIRL A  VV+THTD+PHLFVWDF  Q  R   + + ++P  TLVGH  +A+YA+DVA          + D W+VSGG DCSVL+W ++DYQS G  L P  RM G   +S  +GHT  +EDVSF    RN++ SVGRD A+ LWD R    PT+ V KAH GDINCCD GG  +  I+TGG D  +++WD R L    GE +P++ L GH+  +TN+MWN+ V   LASG  DGQVL+W I +        S  Y VSPEL+F+HVGH+ +   I D +W PS SDPWCIASLSETVG GGS +Q+WRISD+I+R  EEVAADL++++RSR
Sbjct:    7 PVGSLNADARFEIWKDQHVPLLYDWLSSRNLVWPHEALRWGALSPDENRSRERTVISNGAPSITRALYLAERTGPSKNDPNTLLHFDVKVTPELSCKPQDIAKPWLNEAVVLERADQMSTRSFWLRKRIIHPGEVNRIRLAAPGVVITHTDNPHLFVWDFNMQPARAKDEMTASVPTVTLVGHHDDADYALDVAPPPNLDSDAGQADTWIVSGGRDCSVLVWCLKDYQSMGPELMPRARMVGGRNMSPDLGHTNIVEDVSFNSHDRNIVVSVGRDSAMMLWDTRTTARPTSTVRKAHVGDINCCDAGGTDQYLIITGGSDHLIKVWDRRYLTNALGERKPIKTLHGHSNQVTNVMWNKYVPATLASGGEDGQVLLWNIKETDRRPAFSSGLYSVSPELMFRHVGHTQSPSKIVDFEWHPSESDPWCIASLSETVGEGGSTVQIWRISDLIYREKEEVAADLRQHARSR 474          
BLAST of Ggra8852.t1 vs. uniprot
Match: A0A7S1TIN6 (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1TIN6_9RHOD)

HSP 1 Score: 295 bits (756), Expect = 2.140e-88
Identity = 173/455 (38.02%), Postives = 242/455 (53.19%), Query Frame = 0
Query:   17 VGSLNRSTRFKLWKEQDVPILYDWISSRPLVWPSAAVQWGAPIEDSRRDRAPNNHTFSNRAIYLSERTGDATRDPNTLLQFEVRVVHELTNKPSEVARPWVEEPAITDRSDTNSSRDFVLRKRILHPGEVNRIRLIARDVVVTHTDSPHLFVWDFKKQ---QDRKPRDTSPNIPDCTLVGHSSNAEYAIDVAGYSGTEEDKWVVSGGSDCSVLLWRMEDYQSSGQRLSPFVRMTGSNGISKPVGHTEHIEDVSFCGKQRNVIASVGRDEALFLWDVRAPQSPTAYVYKAHKGDINCCDYGGLCENYIVTGGEDKQVRLWDTRKLKGTAGEPQPLRELRGHTEAITNLMWNRNVENVLASGAIDGQVLIWGIG-DECSHRQADSPYYDVSPELLFKHVGHSINDENIWDLDWLPSSSDPWCIASLSETVGSGGSVLQVWRISDIIHRPTEEVAADL 467
            +G  +   R++ WKEQ VP+LYDW+ S+   WPSA VQW AP            HT+  R + L+ERTGD   D NTLL  +VRV +E   +   VA  W +     D       +DFV+ KR++HPGE+NR+R     +V+THTD P + VW  + Q   ++    +   + PD  L GH  NAEYAI      GT    WV SGGSD  V++W ++D+ S+    SP + +     +S   GH   +EDVSF      ++ SVG D  + +WD RA + P A V  AH  DINC D+  L    I TGG D  VR+WD R L    G+  PL     H   +  + W+   ++VLAS + DG VL+W +   E  H  + S    V P+L+F+H GH      + D  W P  SDPW I S+SE   + GS +Q+WR+ D+I+R  + V  ++
Sbjct:  343 IGYGSELVRYQHWKEQHVPLLYDWLLSQKFCWPSACVQW-APGSGVCTGEG---HTY--RTVLLTERTGDI--DANTLLVAKVRVANERYTRADAVALKWSD-----DYEKPLPRQDFVVTKRLVHPGEINRLRSPKPGMVITHTDGPDVLVWFLEHQPHIREGNVGEQESSKPDIVLRGHEENAEYAIATRIVDGT----WVASGGSDRRVVIWNVDDFDST---TSPKLELDCRFKLS---GHLATVEDVSFHPDANLMLCSVGDDRMMCIWDTRASKFPVARVEGAHGDDINCVDWNQLEAYLIATGGGDNLVRVWDQRNLASVQGKANPLFSFEQHLRQVNEVSWHSTDKSVLASCSHDGDVLVWNLARTELQHVPSSS--VSVPPQLMFRHKGHQ---GVVADFQWNPDPSDPWLIVSVSED--TEGSTVQIWRMFDLIYRAKDHVVKEI 767          
BLAST of Ggra8852.t1 vs. uniprot
Match: A0A7S2ZN90 (Hypothetical protein n=8 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZN90_9RHOD)

HSP 1 Score: 270 bits (689), Expect = 3.770e-82
Identity = 169/449 (37.64%), Postives = 244/449 (54.34%), Query Frame = 0
Query:   29 WKEQDVPILYDWISSRPLVWPSAAVQWGAPIEDSRRDRAPNNHTFSNRAIYLSERTGDATRDPNTLLQFEVRVVHELTNKPSEVARPWVEEPAITDRSDTNSSRDFVLRKRILHPGEVNRIRLIARDVVVTHTDSPHLFVWDFKKQQDRKPRDTSP----NIPDCTLVGHSSNAEYAIDVAGYSGTEEDKWVVSGGSDCSVLLWRMEDYQSSGQRLSPFVRMTGSNGISKPV--GHTEHIEDVSFCGKQRNVIASVGRDEALFLWDVRAPQSPTAYVYKAHKGDINCCDYG--GLCENYIVTGGEDKQVRLWDTRKLKGTAGEPQPLRELRGHTEAITNLMWNR-NVENVLASGAIDGQVLIWGIGDECSHRQADSPYYDVSPELLFKHVGHSINDENIWDLDWLPSSSDPWCIASLSETVGSGGSVLQVWRISDIIHRPTEEVAADLK 468
            WK   VP+LYDW+ SR   WPSA VQ+G    DSR        T+++R +YLSERTG+ T D NTL     RV +E   + ++V + W E        D   S DF ++K+I+HPGEVNR+R +   VVVTHTD P+LFVWD ++Q  RK  DTS     N+PD TLVGH +NAEYA++       EE K + SGG D  VL+W+MEDY++        +    S+ +++ +  GH++ +E ++F  +    + S G D+ +F WD R   + T  +  AH+GD+NC D+   G+   YI +G           R+L  ++ E     +LR HT  I  + +      +VL S A DGQVL+W I    S  ++ S   ++   LLF+H GH      + +  W     DPW IAS+SE     G+ LQ+WR  D+I+    + A  L+
Sbjct:   19 WKHSHVPLLYDWMLSRKCPWPSACVQFGLGY-DSR-------DTYTDRTLYLSERTGE-TGDANTLYVASARVANEHATRSADVTKKWSENVY----RDPLPSSDFRIKKKIIHPGEVNRVRELREGVVVTHTDHPNLFVWDIERQPHRK--DTSKGVESNVPDLTLVGHQANAEYAVE-----SVEEGKIIASGGKDKLVLIWQMEDYET-------LLSSKNSHLLNRTILRGHSDTVEGLAFNPEDSRRLVSGGDDKCVFFWDTRK-SAATGKINDAHQGDVNCVDWSHNGM---YIASGXXXXXXXXXXVRQLSQSS-EVTSFADLREHTGQINEVQFQPCGNSSVLGSCAEDGQVLLWDIAQVESDSKS-STGGEIPSLLLFRHYGHQYA---VSEFQWSTVPDDPWTIASVSED--EEGATLQIWRPLDLIYNSPVDAANILR 429          
BLAST of Ggra8852.t1 vs. uniprot
Match: A0A1S2XE47 (WD-40 repeat-containing protein MSI4-like n=1 Tax=Cicer arietinum TaxID=3827 RepID=A0A1S2XE47_CICAR)

HSP 1 Score: 266 bits (680), Expect = 1.970e-80
Identity = 169/472 (35.81%), Postives = 242/472 (51.27%), Query Frame = 0
Query:   19 SLNRSTRFKLWKEQDVPILYDWISSRPLVWPSAAVQWGAPIEDSRRDRAPNNHTFSNR-AIYLSERTGDATRDPNTLLQFEVRVVHELTNKPSEVARPWVEEPAITDRSDTNSSRDFVLR-KRILHPGEVNRIRLIA--RDVVVTHTDSPHLFVWDFKKQQDRKPRDTSP-NIPDCTLVGHSSNAEYAIDVAGYSGTEEDKWVVSGGSDCSVLLWRMEDY-------------QSSGQRLSPFVRMTGSNGISKPVGHTEHIEDVSFCGKQRNVIASVGRDEALFLWDVRAPQSPTAYVYKAHKGDINCCDYGGLCENYIVTGGEDKQVRLWDTRKLKGTAGEPQPLRELRGHTEAITNLMWNRNVENVLASGAIDGQVLIWG---IGDECSHRQADSPYYDVSPELLFKHVGHSINDENIWDLDWLPSSSDPWCIASLSETVGS--GGSVLQVWRISDIIHRPTEEVAADL 467
            S++   R+  WK   VP+LYDW+++  LVWPS + +WG+ I+ +         T+ NR  +YLSE+T      PNTL+               EV +P V       + +  +   FV + K ILHPGEVNRIR  A   ++V THTDSPH+ +WD + Q +R     +P + PD  L GH  NAE+A+ +        + +V+SGG D  V+LW + D+             Q S    +      G  GI +  GH + +EDV FC        SVG D  L LWDVR   +P   V KAH GD++C D+     N+I+TG  D  V ++D RKL  + G   P+ +  GH  A+  + W  +  +V  S A DG + IW    +G   +   AD    + SP L F+H GH    + + D  W  ++SDPW I S+S+   S  GG  LQ+WR+ D+I+RP EEV A+L
Sbjct:   17 SMSVEDRYTQWKSL-VPVLYDWLANHNLVWPSQSCRWGSVIDHA---------TYKNRHRLYLSEQTDGTV--PNTLVI-----------ATCEVVKPRVAAAEHIAQFNEEARSPFVKKHKTILHPGEVNRIREFALNTNIVATHTDSPHVLIWDVESQPNRNAVLGAPVSRPDLVLTGHKDNAEFALAMCS-----TEPFVLSGGRDKLVVLWSIHDHIATLATEAGANVKQDSNSEKATESSSIGPRGIYR--GHKDTVEDVQFCPSSAQEFCSVGDDSCLILWDVRVGSTPAVKVEKAHDGDLHCVDWSSHDINFILTGSADNTVHMFDRRKLN-SRGVGSPVYKFEGHDAAVLCVQWCPDKSSVFGSCAEDGILNIWDTDKVGK--TSDSADPTVSNTSPGLFFRHAGHR---DKVVDFHW--NASDPWTIVSVSDDCASTGGGGTLQIWRMLDLIYRPEEEVMAEL 450          
BLAST of Ggra8852.t1 vs. uniprot
Match: A0A0K9RF59 (CAF1C_H4-bd domain-containing protein n=6 Tax=Chenopodiaceae TaxID=1804623 RepID=A0A0K9RF59_SPIOL)

HSP 1 Score: 266 bits (679), Expect = 2.220e-80
Identity = 161/467 (34.48%), Postives = 238/467 (50.96%), Query Frame = 0
Query:   25 RFKLWKEQDVPILYDWISSRPLVWPSAAVQWGAPIEDSRRDRAPNNHTFSNRA-IYLSERTGDATRDPNTLLQFEVRVVHELTNKPSEVARPWVEEPAITDRSDTNSSRDFVLR-KRILHPGEVNRIRLIARD--VVVTHTDSPHLFVWDFKKQQDRKP-RDTSPNIPDCTLVGHSSNAEYAIDVAGYSGTEEDKWVVSGGSDCSVLLWRMEDY-------QSSGQRLSPFVRMTGSNGISKPVG-------HTEHIEDVSFCGKQRNVIASVGRDEALFLWDVRAPQSPTAYVYKAHKGDINCCDYGGLCENYIVTGGEDKQVRLWDTRKLKGTAGEPQPLRELRGHTEAITNLMWNRNVENVLASGAIDGQVLIWGIGDECSHRQADSPYYDVSPELLFKHVGHSINDENIWDLDWLPSSSDPWCIASLSETVGS--GGSVLQVWRISDIIHRPTEEVAADLKRY 470
            ++  WK   VP+LYDW+++  LVWPS + +WG  +E +         T+ NR  +YLSE+T  +   PNTL+         + N   E+ +P V       + +  +   FV + K I+HPGEVNRIR + +   +V THTDSP + +WD + Q +R      +P+ PD  L GH  NAE+A+         ++ +V+SGG D +V+LW ++D+        SS +       +   NG S  VG       H + +EDV FC K      SVG D  L LWD R    P   V KAH  D++C D+    ENYI+TG  D  VR++D R L    G   P+ +  GH  A+  + W+ +   V  S A DG + IW        ++      +  P L F+H GH    + + D  W  ++ D W I S+S+   S  GG  LQ+WR+SD+I+RP EEV A+L+ +
Sbjct:   13 KYAQWKTL-VPVLYDWLANHNLVWPSLSCRWGPQLEQA---------TYKNRQRLYLSEQTDGSV--PNTLV---------IAN--CEIVKPRVAAAEHISQFNEEARSPFVKKYKTIIHPGEVNRIRELPQHNHIVATHTDSPDVLIWDVESQPNRHAVLGATPSRPDLVLTGHKENAEFALATC-----PKEPYVLSGGKDTTVVLWSIQDHITTTASDPSSNKPQGSAATIVKQNGESPSVGPRGIFQGHEDTVEDVQFCPKSSQEFCSVGDDSCLILWDARTGSDPAIKVEKAHNADLHCVDWNPFDENYILTGSADSTVRMFDRRNLTSD-GVGSPVHKFEGHKAAVLCVQWSPDNPTVFGSSAEDGVLNIWDYEKVGKKKERGVRTPNAPPGLFFQHAGHR---DKVVDFHW--NTYDSWTIVSVSDDCDSSGGGGTLQIWRMSDLIYRPEEEVLAELEEF 445          
BLAST of Ggra8852.t1 vs. uniprot
Match: A0A251NEK9 (CAF1C_H4-bd domain-containing protein n=10 Tax=Amygdaloideae TaxID=171637 RepID=A0A251NEK9_PRUPE)

HSP 1 Score: 267 bits (682), Expect = 2.780e-80
Identity = 166/478 (34.73%), Postives = 245/478 (51.26%), Query Frame = 0
Query:   25 RFKLWKEQDVPILYDWISSRPLVWPSAAVQWGAPIEDSRRDRAPNNHTFSNRA-IYLSERTGDATRDPNTLLQFEVRVVHELTNKPSEVARPWVEEPAITDRSDTNSSRDFVLR-KRILHPGEVNRIRLIARD--VVVTHTDSPHLFVWDFKKQQDRKP-RDTSPNIPDCTLVGHSSNAEYAIDVAGYSGTEEDKWVVSGGSDCSVLLWRMEDYQSSGQRLSPFVRMTGSNGI-----SKP-------------------VGHTEHIEDVSFCGKQRNVIASVGRDEALFLWDVRAPQSPTAYVYKAHKGDINCCDYGGLCENYIVTGGEDKQVRLWDTRKLKGTAGEPQPLRELRGHTEAITNLMWNRNVENVLASGAIDGQVLIWGIGDECSHRQADSPYYDVSPELLFKHVGHSINDENIWDLDWLPSSSDPWCIASLSE---TVGSGGSVLQVWRISDIIHRPTEEVAADLKRY 470
            ++  WK   VP+LYDW+++  LVWPS + +WG  +E +         T+ NR  +YLSE+T  +   PNTL+         + N   EV +P V       + +  +   FV + K I+HPGE+NRIR + ++  +V THTDSP + +WD + Q +R      + + PD  L GH  NAE+A+ +        + +V+SGG D +V+LW ++D+ S+        +  GS G      SKP                    GH + +EDV+FC        SVG D  L LWD R   SP   V KAH  D++C D+    +N I+TG  D  VRL+D R L  + G   P+ +  GH  A+  + W  +  +V  S A DG + IW     C  R    P     P L F+H GH    + + D  W  ++SDPW I S+S+   T G GG+ LQ+WR+SD+I+RP EEV A+L+++
Sbjct:   51 KYTQWKSL-VPVLYDWLANHNLVWPSLSCRWGPQLEQA---------TYKNRQRLYLSEQTDGSV--PNTLV---------IAN--CEVVKPRVAAAEHISQFNEEARSPFVKKYKTIIHPGEINRIRELPQNTKIVATHTDSPDVLIWDVEAQPNRHAVLGATSSRPDLILTGHQDNAEFALAMC-----PTEPYVLSGGKDKTVVLWSIQDHISAATTDPAATKSQGSGGSIIKQNSKPGDGNDKAADGPSVAPRGIYYGHEDTVEDVAFCPSSSQEFCSVGDDSCLILWDARVGSSPAIKVEKAHNADLHCVDWNPHDDNLILTGSADNSVRLFDRRNLT-SGGVGAPIYKFEGHKAAVLCVQWCPDKSSVFGSSAEDGLLNIWDYEKVCKERTTKGP--SSPPGLFFQHAGHR---DKVVDFHW--NASDPWTIVSVSDDCDTTGGGGT-LQIWRMSDLIYRPEEEVLAELEKF 491          
BLAST of Ggra8852.t1 vs. uniprot
Match: A0A1Q3CBT1 (WD40 domain-containing protein/CAF1C_H4-bd domain-containing protein n=1 Tax=Cephalotus follicularis TaxID=3775 RepID=A0A1Q3CBT1_CEPFO)

HSP 1 Score: 266 bits (681), Expect = 3.520e-80
Identity = 168/471 (35.67%), Postives = 247/471 (52.44%), Query Frame = 0
Query:   25 RFKLWKEQDVPILYDWISSRPLVWPSAAVQWGAPIEDSRRDRAPNNHTFSNRA-IYLSERTGDATRDPNTLLQFEVRVVHELTNKPSEVARPWVEEPAITDRSDTNSSRDFVLR-KRILHPGEVNRIRLIARD--VVVTHTDSPHLFVWDFKKQQDRKPRDTSPNI-PDCTLVGHSSNAEYAIDVAGYSGTEEDKWVVSGGSDCSVLLWRMEDYQSSGQRLSPFVR------------MTGSNGISKPVGHTEHIEDVSFCGKQRNVIASVGRDEALFLWDVRAPQSPTAYVYKAHKGDINCCDYGGLCENYIVTGGEDKQVRLWDTRKLKGTAGEPQPLRELRGHTEAITNLMWNRNVENVLASGAIDGQVLIW-----GIGDECSHRQADSPYYDVSPELLFKHVGHSINDENIWDLDWLPSSSDPWCIASLS---ETVGSGGSVLQVWRISDIIHRPTEEVAADLKRY 470
            ++  WK   VP+LYDW+++  LVWPS + +WG  +E +         T+ NR  +YLSE+T  +   PNTL+         + N   EV +P V       + +  +   FV + K I+HPGEVNRIR + ++  +V THTDSP + +WD + Q +R     + N  PD  L GH  NAE+A+ +        + +V+SGG D SV+LW ++DY S G  +    +              G  G+    GH + +EDV+FC        SVG D  L LWD R   SP   V KAH  D++C D+     N+I+TG  D  VR++D R L    G   P+ +  GH  A+  + W+ +  +V  S A DG + IW     G   E + R  +SP     P L F+H GH    + + D  W  ++SDPW I S+S   ET G GG+ LQ+WR+SD+I+RP +EV A+L+++
Sbjct:   55 KYTQWKSL-VPVLYDWLANHNLVWPSLSCRWGPQLEQA---------TYKNRQRLYLSEQTDGSV--PNTLV---------IAN--CEVVKPRVAAAEHISQFNEEARSPFVKKYKTIIHPGEVNRIRELPQNTKIVATHTDSPDVLIWDVEAQPNRHAVLGATNSRPDLILTGHQDNAEFALAMC-----PTEPFVLSGGKDKSVVLWSIQDYISGGSVVKQNAKPGEGTDKSADGPAIGPRGVYN--GHEDTVEDVTFCPSSAQEFCSVGDDSCLILWDARIGTSPAVKVEKAHDADLHCVDWNPHDNNFILTGSADNSVRMFDRRNLTSN-GIGSPIHKFEGHKAAVLCVQWSPDKSSVFGSSAEDGLLNIWDYEKVGKKVERAARTPNSP-----PGLFFQHAGHR---DKVVDFHW--NASDPWTIVSVSDDCETTGGGGT-LQIWRMSDLIYRPEDEVLAELEKF 483          
BLAST of Ggra8852.t1 vs. uniprot
Match: I1HQV4 (CAF1C_H4-bd domain-containing protein n=14 Tax=Pooideae TaxID=147368 RepID=I1HQV4_BRADI)

HSP 1 Score: 265 bits (677), Expect = 4.400e-80
Identity = 171/473 (36.15%), Postives = 240/473 (50.74%), Query Frame = 0
Query:   25 RFKLWKEQDVPILYDWISSRPLVWPSAAVQWGAPIEDSRRDRAPNNHTFSNRA-IYLSERTGDATRDPNTLLQFEVRVVHELTNKPSEVARPWVEEPAITDRSDTNSSRDFVLR-KRILHPGEVNRIRLIARD--VVVTHTDSPHLFVWDFKKQQDRKP-RDTSPNIPDCTLVGHSSNAEYAIDVAGYSGTEEDKWVVSGGSDCSVLLWRMEDY-----QSSGQRLSPFV---RMTGSNGISKPV----------GHTEHIEDVSFCGKQRNVIASVGRDEALFLWDVRAPQSPTAYVYKAHKGDINCCDYGGLCENYIVTGGEDKQVRLWDTRKLKGTAGEPQPLRELRGHTEAITNLMWNRNVENVLASGAIDGQVLIWGIGDECSHRQADSPYYDVSPE-LLFKHVGHSINDENIWDLDWLPSSSDPWCIASLS---ETVGSGGSVLQVWRISDIIHRPTEEVAADLKRY 470
            R+  WK   +P+LYDW ++  LVWPS + +WG   E +         T+ NR  +YLSE+T  +   PNTL+         + N   EV +P V       + +  +   FV + K I+HPGEVNRIR + +D  ++ THTDSP + +WD   Q +R      S + PD  L GH  NAE+A+ +        + +V+SGG D SV+ W ++D+      SS    SP     + +G     K            GH   +EDV FC        SVG D  L LWD R   SP   V KAH GD++C D+     NYI+TG  D  VR+WD R L G  G   P+ +  GH  A+  + W+ +  +V  S A DG + +W       H +A       SP  L F+H GH    + I D  W  +SSDPW I S+S   ET G GG+ LQ+WR+SD+I+RP EEV ++L+ +
Sbjct:   14 RYAQWKSL-IPVLYDWFANHNLVWPSLSCRWGPQFEQA---------TYKNRQRLYLSEQTDGSV--PNTLV---------IAN--CEVVKPRVAAAEHISQFNEEARSPFVKKFKTIIHPGEVNRIRELPQDSRIIATHTDSPDVLIWDVDSQPNRHAVLGASDSRPDLILRGHQENAEFALAMC-----PAEPFVLSGGKDKSVVWWSIQDHISGLGDSSKNESSPGASGSKQSGKTANDKDSPKVDPRGVFHGHDSTVEDVQFCPSSAQEFCSVGDDACLILWDARTGTSPAIKVEKAHGGDVHCVDWNLHDVNYILTGSADNSVRMWDRRNL-GPGGAGSPVHKFDGHKAAVLCVQWSPDKASVFGSSAEDGFLNVW------DHEKAGKKKNPNSPAGLFFQHAGHR---DKIVDFQW--NSSDPWTIVSVSDDGETTGGGGT-LQIWRMSDLIYRPEEEVLSELENF 445          
BLAST of Ggra8852.t1 vs. uniprot
Match: A0A7S0N3V0 (Hypothetical protein (Fragment) n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0N3V0_9CHLO)

HSP 1 Score: 264 bits (674), Expect = 3.930e-79
Identity = 166/465 (35.70%), Postives = 238/465 (51.18%), Query Frame = 0
Query:   23 STRFKLWKEQDVPILYDWISSRPLV-WPSAAVQWGAPIEDSRRDRAPNNHTFSNRA-IYLSERTGDATRDPNTLLQFEVRVVHELTNKPSEVARPWVEEPAITDRSDTNSSRDFVLRKRIL-HPGEVNRIRLIAR--DVVVTHTDSPHLFVWDFKKQQDRKPRDTSPNIPDCTLVGHSSNAEYAIDVAGYSGTEEDKWVVSGGSDCSVLLWRMEDYQSSGQRLSPFVRMTGSNGISKPV--------GHTEHIEDVSFCGKQRNVIASVGRDEALFLWDVRAPQSPTAYVYKAHKGDINCCDYGGLCENYIVTGGEDKQVRLWDTRKLKGTAGEPQPLRELRGHTEAITNLMWNRNVENVLASGAIDGQVLIWGIGDECSHRQADSPYYDVSPELLFKHVGHSINDENIWDLDWLPSSSDPWCIASLS----ETVGSGGSVLQVWRISDIIHRPTEEVAADLKRY 470
            S ++  WK   +P LYDW ++  LV WPS   +WG  +E         +HT+ N+  +YLSERT  +   PNTLL              +EV RP V       + +      FV + +++ HPGEVN+IR +     VVVTHTD+P L+VW+ ++Q      D  P  PD  L+GH  NAE+A+ ++      +   V SGG D  VLLW +ED++++   LS       +N    P         GH + IEDV F       + SVG D+ L  WD RA  SP   V KAH  D++CCD+    ++ IVTG  DK +RL+D RKL  T      +     H   IT + W+ + + +LAS + D +V +W      + +  D   Y   PELLF+H GH      + D  W P   DPW   S+S    E  G GG  LQ+WR++D+I+RP +EV A+L+++
Sbjct:   13 SKQYNRWKTL-IPFLYDWFNNHNLVPWPSYTCRWGPQME---------SHTYKNKQRLYLSERTDGSA--PNTLLVMN-----------AEVIRPRVAAAEHIAKFNEEHLSPFVKKHKVIPHPGEVNKIREVPDIPHVVVTHTDAPELYVWNVERQPAEAQADAEPT-PDAILIGHKENAEFALGMS-----RKGSCVASGGQDKMVLLWSLEDHKTA---LSSTSADNSANLQKAPKIEPRFKFQGHKDTIEDVRFNPFSEYELCSVGDDKTLLFWDSRAGTSPVLKVLKAHNNDLHCCDWSPFEDHLIVTGSADKNLRLFDRRKLTLTTTGAAVVHCFESHEAPITTVEWSPHAKGILASSSEDAKVNVWDCTKFGARQSVDERKYG-PPELLFQHAGHR---SQVVDFHWNPV--DPWTCLSVSDESSELSGGGGGTLQLWRVNDLIYRPEKEVLAELEKH 439          
The following BLAST results are available for this feature:
BLAST of Ggra8852.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3ILX73.340e-27675.53WD-40 repeat-containing protein MSI4 n=1 Tax=Graci... [more]
R7QKR81.070e-18253.21Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A7S1TIN62.140e-8838.02Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
A0A7S2ZN903.770e-8237.64Hypothetical protein n=8 Tax=Rhodosorus marinus Ta... [more]
A0A1S2XE471.970e-8035.81WD-40 repeat-containing protein MSI4-like n=1 Tax=... [more]
A0A0K9RF592.220e-8034.48CAF1C_H4-bd domain-containing protein n=6 Tax=Chen... [more]
A0A251NEK92.780e-8034.73CAF1C_H4-bd domain-containing protein n=10 Tax=Amy... [more]
A0A1Q3CBT13.520e-8035.67WD40 domain-containing protein/CAF1C_H4-bd domain-... [more]
I1HQV44.400e-8036.15CAF1C_H4-bd domain-containing protein n=14 Tax=Poo... [more]
A0A7S0N3V03.930e-7935.70Hypothetical protein (Fragment) n=1 Tax=Pyramimona... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR020472G-protein beta WD-40 repeatPRINTSPR00320GPROTEINBRPTcoord: 370..384
score: 34.32
coord: 320..334
score: 36.79
coord: 275..289
score: 29.96
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 293..333
e-value: 4.7E-6
score: 36.1
coord: 248..288
e-value: 0.8
score: 17.6
coord: 343..383
e-value: 4.6E-6
score: 36.1
coord: 184..229
e-value: 1.9
score: 15.2
IPR001680WD40 repeatPFAMPF00400WD40coord: 190..228
e-value: 0.057
score: 14.3
coord: 299..333
e-value: 1.8E-4
score: 22.2
coord: 345..382
e-value: 0.0096
score: 16.8
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 350..382
score: 12.045688
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 255..297
score: 9.071468
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 300..335
score: 10.942887
IPR022052Histone-binding protein RBBP4, N-terminalPFAMPF12265CAF1C_H4-bdcoord: 27..99
e-value: 9.6E-6
score: 25.8
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 12..468
e-value: 2.3E-78
score: 266.1
NoneNo IPR availablePANTHERPTHR22850:SF27HISTONE-BINDING PROTEIN CAF1-RELATEDcoord: 25..468
NoneNo IPR availablePANTHERPTHR22850WD40 REPEAT FAMILYcoord: 25..468
NoneNo IPR availablePROSITEPS50294WD_REPEATS_REGIONcoord: 300..335
score: 9.177421
NoneNo IPR availablePROSITEPS50294WD_REPEATS_REGIONcoord: 350..382
score: 10.047417
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 320..334
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 275..289
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 140..454

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000860_piloncontigtig00000860_pilon:531244..532674 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra8852.t1Ggra8852.t1Gracilaria gracilis GNS1m malemRNAtig00000860_pilon 531244..532674 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra8852.t1 ID=Ggra8852.t1|Name=Ggra8852.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=477bp
MVANAEPDAQRKRTMPVGSLNRSTRFKLWKEQDVPILYDWISSRPLVWPS
AAVQWGAPIEDSRRDRAPNNHTFSNRAIYLSERTGDATRDPNTLLQFEVR
VVHELTNKPSEVARPWVEEPAITDRSDTNSSRDFVLRKRILHPGEVNRIR
LIARDVVVTHTDSPHLFVWDFKKQQDRKPRDTSPNIPDCTLVGHSSNAEY
AIDVAGYSGTEEDKWVVSGGSDCSVLLWRMEDYQSSGQRLSPFVRMTGSN
GISKPVGHTEHIEDVSFCGKQRNVIASVGRDEALFLWDVRAPQSPTAYVY
KAHKGDINCCDYGGLCENYIVTGGEDKQVRLWDTRKLKGTAGEPQPLREL
RGHTEAITNLMWNRNVENVLASGAIDGQVLIWGIGDECSHRQADSPYYDV
SPELLFKHVGHSINDENIWDLDWLPSSSDPWCIASLSETVGSGGSVLQVW
RISDIIHRPTEEVAADLKRYSRSRDL*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR020472G-protein_beta_WD-40_rep
IPR001680WD40_repeat
IPR022052Histone-bd_RBBP4_N
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR019775WD40_repeat_CS
IPR036322WD40_repeat_dom_sf