Ggra8851.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra8851.t1
Unique NameGgra8851.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length206
Homology
BLAST of Ggra8851.t1 vs. uniprot
Match: A0A2V3IUE5 (PDDEXK_1 domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IUE5_9FLOR)

HSP 1 Score: 245 bits (625), Expect = 4.600e-79
Identity = 111/191 (58.12%), Postives = 147/191 (76.96%), Query Frame = 0
Query:   13 RHMSGLRTDQLFPGIPPGTILCEDDDPWLESVPMTPAGRDHSVYIRGKLDALVRFDDGSYGVIDFKTSSAAKTSGTYSRQLHAYAAALENPSDNSQLERASVSELGLVVYTPFDFHTPLDKEGKIHAAMTGDIQYIRIERDDPGFQRFLGEVIDVLDMPEPPAPKLSTGKNFSTCSYCNYLYHAHQKGLLL 203
            R MSGL+T+ L P + PG  LCE++DPW+E +P+TP G  +SVYIRGKLDA+V + DG+YG+IDFKTSS+   S  YSRQLHAYA A+ENP+ +S L++A +SELGLV+Y+P +FHTP+D EG++ AAMTGD++Y+++ERDD GF +FLGEV+DVL+MPE P        +  TC YC YL+ A   GLLL
Sbjct:   48 RRMSGLQTNSLIPDMRPGKFLCEEEDPWIECLPITPPGHKNSVYIRGKLDAMVEYADGTYGIIDFKTSSSTGASTLYSRQLHAYATAIENPTTDSPLKKARISELGLVIYSPSEFHTPVDSEGRVQAAMTGDLKYVKVERDDAGFLQFLGEVLDVLNMPEAPPFSSRIRSSAPTCPYCKYLHQARDSGLLL 238          
BLAST of Ggra8851.t1 vs. uniprot
Match: R7QKI4 (PDDEXK_1 domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QKI4_CHOCR)

HSP 1 Score: 168 bits (426), Expect = 9.770e-50
Identity = 83/148 (56.08%), Postives = 109/148 (73.65%), Query Frame = 0
Query:   60 KLDALVRFDDGSYGVIDFKTSSAAKTSGTYSRQLHAYAAALENPSDNSQLERASVSELGLVVYTPFDFHTPLDKEGKIHAAMTGDIQYIRIERDDPGFQRFLGEVIDVLDMPEPPAP-----KLSTGKNFSTCSYCNYLYHAHQKGLL 202
            ++D LVRFDDG++GVIDFKTS AAK+S TYSRQLHAYA A+ENPS  S+L + +VS++GLVVYT  DFHTP  + G I AA+TGD+ Y+++ RDD  F+ FL EV+DVL +PE P       K   G +FS+C YC +L+ A  +GL+
Sbjct:   29 QVDCLVRFDDGTFGVIDFKTSQAAKSSLTYSRQLHAYALAIENPSTQSELLQGTVSDMGLVVYTLKDFHTPATENGDISAALTGDLTYVQVPRDDKAFEGFLSEVLDVLILPEAPXXXXXLLKRKWGASFSSCPYCQFLHDAKMRGLI 176          
BLAST of Ggra8851.t1 vs. uniprot
Match: A0A7S1TB95 (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1TB95_9RHOD)

HSP 1 Score: 147 bits (370), Expect = 7.440e-39
Identity = 79/179 (44.13%), Postives = 105/179 (58.66%), Query Frame = 0
Query:   17 GLRTDQLFPG--IPPGTILCEDDDPWLESVPMT-PAGRDHSVYIRGKLDALVRFDDGSYGVIDFKTSSAAKTSGTYSRQLHAYAAALENPSDNSQLERASVSELGLVVYTPFDFHTPLDKEGKIHAAMTGDIQYIRIERDDPGFQRFLGEVIDVLDMPEPPAPKLSTGKNFSTCSYCNY 192
            G RT+ +F G   P G  LCE+DD W+ES P+  P+    S+ IRGK+D L+R DDGSY VIDFKTS+       Y RQL AYA A+ENP+ N+ LE+  VS+LGLVV+ P +F        +  A + G + YI   R    F +FL EV+ VLD   PP   + +G     C +C+Y
Sbjct:  220 GKRTEDIFSGQTAPAGEFLCEEDDAWVESQPINVPSHPSSSIVIRGKIDCLIRLDDGSYAVIDFKTSNVDTWLTKYDRQLEAYATAMENPAPNADLEKLKVSQLGLVVFEPSEFGHVQKNNSRTRAELGGSLTYIDRPRQTSAFSKFLQEVVAVLDDDSPP---VRSGGMRQNCPFCSY 395          
BLAST of Ggra8851.t1 vs. uniprot
Match: A0A1Q7RC19 (PDDEXK_1 domain-containing protein n=4 Tax=unclassified Acidobacteria TaxID=305072 RepID=A0A1Q7RC19_9BACT)

HSP 1 Score: 126 bits (317), Expect = 9.930e-33
Identity = 76/189 (40.21%), Postives = 106/189 (56.08%), Query Frame = 0
Query:   13 RHMSGLRTDQLFPGIPPGTILCEDDDPWLESVPMTPAGRDHSVYIRGKLDALVRFDDGSYGVIDFKTSSA-AKTSGTYSRQLHAYAAALENPSDNSQLERASVSELGLVVYTPFDFHTPLDKEGKIHAAMTGDIQYIRIERDDPGFQRFLGEVIDVLDMPEPPAPKLSTGKNFSTCSYCNYLYHAHQKG 200
            +H +G RT  + P +P G +  +  + W+ESVP+   G      IRG+LD LVRFDDGS  VIDFKTS   A     Y RQLH+YA A+EN S N +L    V+ LGLVV+ P  F    +K+    A + G + +I I+++D  F  FL +V++VL    PPAP  S       C++C Y   +  +G
Sbjct:   52 KHFAGRRTGDVLPALPSGVL--DTQEHWVESVPLPIPGYPARCVIRGRLDCLVRFDDGSAAVIDFKTSERKAAHIPLYGRQLHSYAVAIENASPN-KLSLRPVTRLGLVVFDPDRF----EKDAAGRAQLFGGLTWIEIQKNDASFLAFLKDVLNVLQQSSPPAPGPS-------CAFCQYRQASRARG 226          
BLAST of Ggra8851.t1 vs. uniprot
Match: A0A363T440 (PDDEXK_1 domain-containing protein n=1 Tax=Anaerolineales bacterium TaxID=2073117 RepID=A0A363T440_9CHLR)

HSP 1 Score: 125 bits (314), Expect = 2.780e-32
Identity = 72/189 (38.10%), Postives = 105/189 (55.56%), Query Frame = 0
Query:   14 HMSGLRTDQLFPGIPPGTILCEDDDPWLESVPMTPAGRDHSVYIRGKLDALVRFDDGSYGVIDFKTSSA-AKTSGTYSRQLHAYAAALENPSDNSQLERASVSELGLVVYTPFDFHTPLDKEGKIHAAMTGDIQYIRIERDDPGFQRFLGEVIDVLDMPEPPAPKLSTGKNFSTCSYCNYLYHAHQKGL 201
            H +G    ++ P +P G I   +   W+ES P++  G   SV++RGK DA++ F+DGSYGV+DFKTS   A     YSRQLHAYA ALE+P+   +L  + +S LGL++  P        +E   H   T    ++ I   + GF  F+ +V+ +L++PEPP P          C+YC Y  HA Q G+
Sbjct:   53 HFAGHPAAEIDPSMPAGIISVSEK--WVESKPISLPGHSLSVFLRGKTDAMLSFEDGSYGVVDFKTSEPKASQIPFYSRQLHAYAYALEHPAPE-KLWLSPISRLGLLIEAPHATFNETSEEINFHFTST----WLEIPYREAGFLSFIDQVVTLLELPEPPPPN-------EKCAYCQYRQHARQHGM 227          
BLAST of Ggra8851.t1 vs. uniprot
Match: A0A1F9ABN2 (PDDEXK_1 domain-containing protein n=1 Tax=Deltaproteobacteria bacterium RBG_13_52_11 TaxID=1797829 RepID=A0A1F9ABN2_9DELT)

HSP 1 Score: 124 bits (311), Expect = 7.810e-32
Identity = 73/186 (39.25%), Postives = 110/186 (59.14%), Query Frame = 0
Query:   17 GLRTDQLFPGIPPGTILCEDDDPWLESVPMTPAGRDHSVYIRGKLDALVRFDDGSYGVIDFKTSSA-AKTSGTYSRQLHAYAAALENPSDNSQLERASVSELGLVVYTPFDFHTPLDKEGKIHAAMTGDIQYIRIERDDPGFQRFLGEVIDVLDMPEPPAPKLSTGKNFSTCSYCNYLYHAHQKGL 201
            G+RT+++ P +P G +   +    +ES P+  +    S +I+GK D +++FDDG+YGVIDFKT+ A ++    Y+RQLH+YA  LENP+   +     +S+LGL+VY P ++   L  +     A+ G I +I I R+D GF  FL EV +VL+MPEPPA          TC +C Y   + + GL
Sbjct:   56 GMRTEEISPALPNGVVRYSEKG--VESKPIYSSNSSSSCFIKGKFDTVLQFDDGTYGVIDFKTAEAKSEHVPLYARQLHSYAHCLENPAPG-KFSLTPISKLGLLVYEPQEYGC-LSSD---RVALHGSITWINIPRNDDGFIAFLEEVFEVLNMPEPPAGS-------PTCVWCQYRDSSRRTGL 227          
BLAST of Ggra8851.t1 vs. uniprot
Match: A0A7S0BQT6 (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0BQT6_9RHOD)

HSP 1 Score: 113 bits (282), Expect = 2.670e-28
Identity = 67/162 (41.36%), Postives = 94/162 (58.02%), Query Frame = 0
Query:   50 GRDHSVYIRGKLDALVRFDDGSYGVIDFKTSSAAKTSGTYSRQLHAYAAALENPSDNSQLERASVSELGLVVYTPFDF--------HTPLDKEGK-IHAAMTGDIQYIRIERDDPGFQRFLGEVIDVLD--MPEPPAPKLSTGKNFSTCSYCNYLYHAHQKG 200
            G++  VYIRGK+D LV  DD +Y +IDFKTS  ++    YSRQLHAYA ALE PS  S++ + +V  +GLV Y P  F         +P +K+G    A +TG   Y  +E++ P F R+L EV++VL+  +P+P             CS+CNYL  A + G
Sbjct:    2 GKESLVYIRGKIDCLVLNDDQTYSIIDFKTSEISRYLSIYSRQLHAYAMALEFPSKKSEIMQGAVKHMGLVCYEPQSFGFSKSGVKKSPENKKGTPATAGLTGICHYHEVEKNFPEFFRYLTEVVEVLEGEIPDPDP----------NCSHCNYLRQAERDG 153          
BLAST of Ggra8851.t1 vs. uniprot
Match: A0A3D4NDB2 (PDDEXK_1 domain-containing protein n=6 Tax=Bacteria TaxID=2 RepID=A0A3D4NDB2_9CHLR)

HSP 1 Score: 113 bits (282), Expect = 1.580e-27
Identity = 71/185 (38.38%), Postives = 98/185 (52.97%), Query Frame = 0
Query:   20 TDQLFPGIPPGTILCEDDDPWLESVPMTPAGRDHSVYIRGKLDALVRFDDGSYGVIDFKTSSAAKTS-GTYSRQLHAYAAALENPSDNSQLERASVSELGLVVYTPFDFHTPLDKEGKIHAAMT--GDIQYIRIERDDPGFQRFLGEVIDVLDMPEPPAPKLSTGKNFSTCSYCNYLYHAHQKGL 201
            T  L P +PPG +  +    W+ S P+   G D S Y++G  D+++ FDDGSY VIDFKTSS +      Y RQL AYA ALE+PS+   L  + +S LGL+   P D        G+ H  +T  G++ +  I +D+  F  F+  V+ +L  PEPPA          TC +C Y   A Q GL
Sbjct:   57 TSALSPDLPPGRVGAQGK--WINSAPIAFDGLDASCYLKGAFDSVLDFDDGSYAVIDFKTSSPSPAHVAFYGRQLSAYAYALEHPSEKG-LRISPISRLGLLYLDPVDI-----AHGEDHKRITYGGEVSWQEIPKDEALFLAFIRGVLTLLSKPEPPAAS-------ETCGFCAYRAEARQHGL 226          
BLAST of Ggra8851.t1 vs. uniprot
Match: A0A3D3J6N4 (PDDEXK_1 domain-containing protein n=2 Tax=Chloroflexi TaxID=200795 RepID=A0A3D3J6N4_9CHLR)

HSP 1 Score: 113 bits (282), Expect = 1.960e-27
Identity = 66/174 (37.93%), Postives = 101/174 (58.05%), Query Frame = 0
Query:   20 TDQLFPGIPPGTILCEDDDPWLESVPMTPAGRDHSVYIRGKLDALVRFDDGSYGVIDFKTSSA-AKTSGTYSRQLHAYAAALENPSDNSQLERASVSELGLVVYTPFDFHTPLDKEGKIHAAMTGDIQYIRIERDDPGFQRFLGEVIDVLDMPEPPAPKLSTGKNFSTCSYCNY 192
            T ++ P +PPG +  ++   W++S P+          IRG+ DA++ F+DGSYG+ID+KTS A A+ +  YSRQL AYA ALENP+  + L  + ++ LGL + TP  +    +K     AA      ++ + RD+  F  FLGEV+ VLD P+PP       ++  +C+ CNY
Sbjct:   56 TSEISPDLPPGIVKYKEK--WVKSSPIFFPEYASQCVIRGRFDAVIAFEDGSYGIIDYKTSDASAEKAAFYSRQLSAYAYALENPAPGA-LNFSPITRLGLFIITPHRY----EKISSEEAAFITRTTWMDVPRDERSFLAFLGEVMSVLDAPQPP-------QSAESCALCNY 215          
BLAST of Ggra8851.t1 vs. uniprot
Match: A0A523UWQ4 (PDDEXK_1 domain-containing protein n=1 Tax=Candidatus Aerophobetes bacterium TaxID=2030807 RepID=A0A523UWQ4_9BACT)

HSP 1 Score: 112 bits (279), Expect = 4.010e-27
Identity = 64/181 (35.36%), Postives = 104/181 (57.46%), Query Frame = 0
Query:   14 HMSGLRTDQLFPGIPPGTILCEDDDPWLESVPMTPAGRDHSVYIRGKLDALVRFDDGSYGVIDFKTSSAAKTS-GTYSRQLHAYAAALENPSDNSQLERASVSELGLVVYTPFDFHTPLDKEGKIHAAMTGDIQYIRIERDDPGFQRFLGEVIDVLDMPEPPAPKLSTGKNFSTCSYCNYL 193
            +  G  T +L P +PPGT+   +   +++S P+       + +IRG+ D +V F+D +YGVIDFKT    + S   Y RQ+HAYA ALENP+  + L+ + V+++GL+ + P    + +D+E     +    I +  I +D+  F +FLGEV+ VL+ P+PPAP          C +C+Y+
Sbjct:   50 YYDGKSTKELHPDLPPGTVRYGER--YVQSNPIRFPSHKVTCFIRGRFDIVVEFEDKTYGVIDFKTGKPNEESLNLYKRQIHAYAYALENPAPGA-LKLSPVTKMGLLYFYP----SKIDQESVESLSYQAQIHWEEIPKDEEWFLKFLGEVLGVLESPQPPAPS-------PDCEWCSYI 216          
The following BLAST results are available for this feature:
BLAST of Ggra8851.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IUE54.600e-7958.12PDDEXK_1 domain-containing protein n=1 Tax=Gracila... [more]
R7QKI49.770e-5056.08PDDEXK_1 domain-containing protein n=1 Tax=Chondru... [more]
A0A7S1TB957.440e-3944.13Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
A0A1Q7RC199.930e-3340.21PDDEXK_1 domain-containing protein n=4 Tax=unclass... [more]
A0A363T4402.780e-3238.10PDDEXK_1 domain-containing protein n=1 Tax=Anaerol... [more]
A0A1F9ABN27.810e-3239.25PDDEXK_1 domain-containing protein n=1 Tax=Deltapr... [more]
A0A7S0BQT62.670e-2841.36Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
A0A3D4NDB21.580e-2738.38PDDEXK_1 domain-containing protein n=6 Tax=Bacteri... [more]
A0A3D3J6N41.960e-2737.93PDDEXK_1 domain-containing protein n=2 Tax=Chlorof... [more]
A0A523UWQ44.010e-2735.36PDDEXK_1 domain-containing protein n=1 Tax=Candida... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR038726PD-(D/E)XK endonuclease-like domain, AddAB-typePFAMPF12705PDDEXK_1coord: 52..192
e-value: 7.9E-9
score: 35.8
IPR011604PD-(D/E)XK endonuclease-like domain superfamilyGENE3D3.90.320.10coord: 40..195
e-value: 3.7E-12
score: 48.5
IPR011335Restriction endonuclease type II-likeSUPERFAMILY52980Restriction endonuclease-likecoord: 51..122

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000860_piloncontigtig00000860_pilon:512399..513175 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra8851.t1Ggra8851.t1Gracilaria gracilis GNS1m malemRNAtig00000860_pilon 512399..513175 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra8851.t1 ID=Ggra8851.t1|Name=Ggra8851.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=206bp
LRRPTSHSYGNNRHMSGLRTDQLFPGIPPGTILCEDDDPWLESVPMTPAG
RDHSVYIRGKLDALVRFDDGSYGVIDFKTSSAAKTSGTYSRQLHAYAAAL
ENPSDNSQLERASVSELGLVVYTPFDFHTPLDKEGKIHAAMTGDIQYIRI
ERDDPGFQRFLGEVIDVLDMPEPPAPKLSTGKNFSTCSYCNYLYHAHQKG
LLLSK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR038726PDDEXK_AddAB-type
IPR011604PDDEXK-like_dom_sf
IPR011335Restrct_endonuc-II-like