Ggra8850.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra8850.t1
Unique NameGgra8850.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length163
Homology
[Close]
BLAST of Ggra8850.t1 vs. uniprot
Match: A0A2V3IU81 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IU81_9FLOR)

HSP 1 Score: 202 bits (514), Expect = 1.910e-64
Identity = 101/132 (76.52%), Postives = 117/132 (88.64%), Query Frame = 0 
Query:   31 MNHGSQPLFREAHCAVLTESGELIVANNTSVRRFQAIVPKIRAIRHSAQSISSFLGMESSTVVHVRGRTRMLHAYEVDAHTLVAVTQVSPDAMNLENAVAYIDECMGVNKKKEADNLDKTLLEQLSNLLLEM 162
            MN GSQPLF EAHCA+LTESGELIV NNTSVRRFQAI PKIRAIR+S+ SISSFLG+E+S VVHVRGRTRMLHAYE+  H LVAVTQV P A NL+NAVAYIDECMGVNK+ + + LD+TLL+QLS++L+E+
Sbjct:    1 MNQGSQPLFTEAHCAILTESGELIVDNNTSVRRFQAIAPKIRAIRNSSDSISSFLGIETSQVVHVRGRTRMLHAYELGKHILVAVTQVLPGAHNLDNAVAYIDECMGVNKRNDTNALDETLLDQLSDMLIEI 132
The following BLAST results are available for this feature:
BLAST of Ggra8850.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IU811.910e-6476.52Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000860_piloncontigtig00000860_pilon:511858..512346 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra8850.t1Ggra8850.t1Gracilaria gracilis GNS1m malemRNAtig00000860_pilon 511858..512346 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra8850.t1 ID=Ggra8850.t1|Name=Ggra8850.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=163bp
MHLSVLAKSRRRRKIRAKLDEVARVVSAPRMNHGSQPLFREAHCAVLTES
GELIVANNTSVRRFQAIVPKIRAIRHSAQSISSFLGMESSTVVHVRGRTR
MLHAYEVDAHTLVAVTQVSPDAMNLENAVAYIDECMGVNKKKEADNLDKT
LLEQLSNLLLEM*
back to top