Ggra8848.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra8848.t1
Unique NameGgra8848.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length722
Homology
BLAST of Ggra8848.t1 vs. uniprot
Match: A0A2V3IM15 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IM15_9FLOR)

HSP 1 Score: 141 bits (355), Expect = 1.640e-31
Identity = 432/732 (59.02%), Postives = 456/732 (62.30%), Query Frame = 0
Query:    1 MKAVTFLALLGVALAAAPTPCPDGA-TAPETPATYAXXXXXXXXXXXSGDYAAPTGGEAPTKTPCPTGSGGDYSAPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAATPC--AKGGDGYTAPADGYSATSPASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEATPVPEATPIPGSAAIANDGSAVIADGDNTVSAAADQESGXXXXXXXXXXXXXXXXXXXXXLGTAGRMYMAAATPCAKSAPSTAPTAEYAAXXXXXTGGDYSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAATPC--AKGGDGYTAPADGYSATSPASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEATPVPEATPIPGSAAIANDGSAVIADGDNTVSAAADQESGXXXXXXXXXXXXXXAPGGAVGVGTAGRMYMAAATPCAKSAPSTAPTAEYAAXXXXXTGGDYSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAA-----TPC--AKGGDGYTAPADGYSATSPASAPAGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAEATXXXXXXXXPGSAAIANDGSAVIADGENTVSAAADQESGSASANGEEGAVAVAAPGAALGLGTAGRVYVDANGAYYTYQ 720
            MKAVTFLALLGVALAAAPTPCP G  TAP T   Y                   T G++P+           Y +         XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   TPC  +KGGD        YSATSP+SXXXXXXXXXX   XXXXXX        XXXXXXXXXXXX       E TP+PGSAA+A DGS VIADGDNTVS AADQ SG                     L TA R    AATPC K                    G Y+XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                   TPC  +KGGD        YSATSP+SXXXXXXXXXX   XXXXXX        XXXXXXXXXXXX       E TP+PGSAA+A DGS VIADGDNTVS AADQ SG               PG A+G+ TA R    AATPC K   +         XXXXX      XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX       TPC  +KGGD        YSATSP+S      XXXXXXX   XXXXXX        XXXX     XXX     PGSAA+A DGS VIADG+NTVS AAD+ SGS+SANGEEGAVAVA PGAALGL TAGRVYVD+NGAYYTY+
Sbjct:    1 MKAVTFLALLGVALAAAPTPCPKGGYTAPTTTPGY-------------------TAGDSPS-----------YGS---------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPMKTPCPSSKGGD--------YSATSPSSXXXXXXXXXXAGGXXXXXXTGSTPATEXXXXXXXXXXXX-------EPTPVPGSAAVAADGSGVIADGDNTVSVAADQTSGSSSANGEEGAVAVAGPGAALGLATAARPV--AATPCPK--------------------GGYTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPMK----------------TPCPSSKGGD--------YSATSPSSXXXXXXXXXXAGGXXXXXXTGSTPATEXXXXXXXXXXXX-------EPTPVPGSAAVAADGSGVIADGDNTVSVAADQTSGSSSANGEEGAVAVAGPGAALGLATAARPV--AATPCPKGGYTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPMKTPCPSSKGGD--------YSATSPSSXXX---XXXXXXXAGGXXXXXXTGSTPATEXXXXXXXXXXXXEPTPVPGSAAVAADGSGVIADGDNTVSVAADETSGSSSANGEEGAVAVAGPGAALGLATAGRVYVDSNGAYYTYR 612          
BLAST of Ggra8848.t1 vs. uniprot
Match: R7QIU2 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QIU2_CHOCR)

HSP 1 Score: 96.7 bits (239), Expect = 1.340e-17
Identity = 140/284 (49.30%), Postives = 169/284 (59.51%), Query Frame = 0
Query:  443 IPGSAAIANDGSAVIADGDNTVSAAADQESGXXXXXXXXXXXXXXAPGGAVGVGTAGRMYMAAATPCAKSAPS-----TAPTA--EYAAXXXXXTGGDYSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAATPCAKGGDGYTAPADGYSATSPASAPAGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAEATXXXXXXXXPGSAAIANDGSAVIADGENTVSAAADQESGSASANGEEGAVAVAAPGAALGLGTAGRVYVDANGAYYTY 719
            +PG+AA+A +GS V A+G+NTVS AAD+ SG               PG A+G+GT+ R Y    TPC +         TAP A  EYAA        +  XXXXXXXXX          XXXXXXXXXXXXXX     XXXX   P        T+P++G++ ++  + P                  XXXXXXXXXXXXXX     XXXXXX  PG+AA+A +GS V A+GENTVS AAD+ SGSASANGE G++A A PGAALGLGT+ RVYVD+ GAYYTY
Sbjct:  155 VPGTAALAANGSGVEAEGENTVSVAADKTSGSASANGETGSLAAAGPGAALGLGTSERAYK---TPCPEPVKEEEPVYTAPEAPEEYAA--------EXXXXXXXXXXXKYETVEPVADXXXXXXXXXXXXXXKTPCPXXXXXXXPSTNPDYSMTSPSEGHTGSATPTHPT--------------TETXXXXXXXXXXXXXXXXXXXXXXXXXVVPGTAALAANGSGVEAEGENTVSVAADKTSGSASANGETGSLAAAGPGAALGLGTSERVYVDSKGAYYTY 413          
The following BLAST results are available for this feature:
BLAST of Ggra8848.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3IM151.640e-3159.02Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QIU21.340e-1749.30Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 531..572
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 218..237
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 288..361
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 461..480
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 22..118
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 11..15
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..15
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 16..721
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..10
NoneNo IPR availableSUPERFAMILY69349Phage fibre proteinscoord: 284..384

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000860_piloncontigtig00000860_pilon:503620..505785 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra8848.t1Ggra8848.t1Gracilaria gracilis GNS1m malemRNAtig00000860_pilon 503620..505785 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra8848.t1 ID=Ggra8848.t1|Name=Ggra8848.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=722bp
MKAVTFLALLGVALAAAPTPCPDGATAPETPATYAAPSTGPTYAAPSGDY
AAPTGGEAPTKTPCPTGSGGDYSAPSGGDYSAPSGGDYSAPSGGDYSAPS
GGDYSAPSGGDYSAPSGGDYTAPAATPCAKGGDGYTAPADGYSATSPASA
PAGGSATSPASAPAAAPAAAPAGAPAGAPAAPAATPAAVEATPVPEATPI
PGSAAIANDGSAVIADGDNTVSAAADQESGSASANGEEGAVALAAPGGAV
GLGTAGRMYMAAATPCAKSAPSTAPTAEYAAPSTAPTGGDYSAPSGGDYS
APSGGDYSAPSGGDYSAPSGGDYSAPSGGDYSAPSGGDYSAPSGGDYSAP
SGGDYSAPSGGDYTAPAATPCAKGGDGYTAPADGYSATSPASAPAGGSAT
SPASAPAAAPAAAPAGAPAGAPAAPAATPAAVEATPVPEATPIPGSAAIA
NDGSAVIADGDNTVSAAADQESGSASANGEEGAVALAAPGGAVGVGTAGR
MYMAAATPCAKSAPSTAPTAEYAAPSTAPTGGDYSAPSGGDYSAPSGGDY
SAPSGGDYSAPSGGDYSAPSGGDYTAPAATPCAKGGDGYTAPADGYSATS
PASAPAGGSATSPASAPAGAPAATPAAAPAATPAAMPVAEATPVPEATPI
PGSAAIANDGSAVIADGENTVSAAADQESGSASANGEEGAVAVAAPGAAL
GLGTAGRVYVDANGAYYTYQG*
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