Ggra8843.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra8843.t1
Unique NameGgra8843.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length505
Homology
BLAST of Ggra8843.t1 vs. uniprot
Match: R7QHG5 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QHG5_CHOCR)

HSP 1 Score: 365 bits (937), Expect = 3.890e-117
Identity = 235/477 (49.27%), Postives = 286/477 (59.96%), Query Frame = 0
Query:   26 SRRRRFAAYSLAFACMLALSLLLDVRRAAERRRTPKLQLTLPSRTSLQSLADDPPADXXXXXXXXXXXXXXXXXXXXXXXSQXXXXXLXXXXXXXLPAVNDASAPSSLTT-------ADSDQPARVDNPNPNLSEQELKDDVDQLIAHVDQQEAIQASQLANSTS-------SAANASLADSTVS--------SNVVANVSASPPVARPMP-------VNASDIDVRLNSQQYFDDAQARLARMLADSHTKTLIDENELRTLQALQLQATRGDCESASDRDA-ALFKTDAEAASNLDIERSDPLWGAWCLFLGSYKTDAMRDFVTKQQVLEHRVGALREQVPQLNATDAHVEFDANAASLDDVMTPEQQSSLRANIDRIMSHLRDIDVRYLAALSLQATFGDCSPYVPNTESEEGSEPVVQELRVLKEPLLDQTAVRREGAQWGAWCVLQGKKRATAASQLMQRVDMLLDQLSKSEA 472
            SRRRR   YS+AFA MLA+S +LDVRRAA + R  K+QL+LPS +SL SL   P  D                       ++             LP  +  +A  S  T       AD DQP  V   +P LSEQELKDDVDQLIAHV Q+E   A+     TS         A  +  D  V         +N    ++A PP A   P         A   +VRLNS++ F  +Q RL  +LAD   K  +DEN+LRTL+AL LQATRGDCE  S  +  +LFKTDAEAASN+DIER DPLWGAWCLF+GSYKTDAMRD+VTKQ+V+E ++   +      N T     FD +AA+LDDVMTPEQQS++R  +D I +HLR+ DVRYLAAL+LQATFGDC PY     +         ELR L EPLLDQ  VRR+GAQWGAWCVLQGKKR  AAS+L QRVD+L++QLSKS+A
Sbjct:   69 SRRRRLILYSVAFATMLAMSSVLDVRRAALKHRHSKVQLSLPSASSLSSL---PNVDDHQESPVSAADLHP---------NEKNPSVSLRPGDPYLPDADTHTANLSAPTVAKGQVAADPDQPPVVKG-DPVLSEQELKDDVDQLIAHVAQEEENGAANATTPTSPLPDPPADPATENKPDPAVPVPKPVQTIANTFLGLAADPPPAAATPDGSAQPNTTADGTEVRLNSEESFSSSQKRLQVLLADDSVKRFVDENDLRTLEALALQATRGDCEQRSGSEGGSLFKTDAEAASNVDIERHDPLWGAWCLFMGSYKTDAMRDYVTKQRVIEEKILTAKGSA-DANVTAVASAFDPHAATLDDVMTPEQQSAMREKMDTIAAHLREYDVRYLAALALQATFGDCGPYGSEAVAAAKEPESTVELRKLAEPLLDQIVVRRQGAQWGAWCVLQGKKRTLAASELSQRVDLLVNQLSKSQA 531          
BLAST of Ggra8843.t1 vs. uniprot
Match: A0A7S1TK85 (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1TK85_9RHOD)

HSP 1 Score: 91.3 bits (225), Expect = 6.280e-16
Identity = 76/265 (28.68%), Postives = 120/265 (45.28%), Query Frame = 0
Query:  232 DAQARLARMLADSHTKTLID---ENELRTLQALQLQATRGDCESASDRDA--ALFKTDAEAASNLDIERSDPLWGAWCLFLGSYKTDAMRDFVTKQQVLE-HRVGALREQVPQLNATDAH--VEFDANA-ASLDDVMTPE------QQSSLRANIDRIMSHLR----------------DIDVRYLAALSLQATFGDCSPYVPNTESEEGSEPVVQELRVLKEPLLDQTAVRREGAQWGAWCVLQGKKRATAASQLMQRVDMLLD 465
            D Q + AR    S   +L +   E E   +QA+ LQ + GDCE  SD +   +LFKT  E+ ++ ++ER+ PLWGAWC+  G  + D M++++ K++ L+  R  AL     +L    A   VE D N  A+ ++ +  E      Q+ S    ++ I + L                 D++ RY+ AL LQ   G CS      E                   L+  +V+R+ A WGAWC+     +  A  + ++R   L D
Sbjct:  247 DDQFQQARERVQSQAASLAEVAGEAEYLAMQAMALQISHGDCERTSDDEEHKSLFKTATESEAD-EVERTSPLWGAWCILRGRNRLDLMKEYLAKEEYLQAQRRRALESHERELANVPAVPVVEADNNTFAARNETIHQEGKTGTEQEDSEAFGVEEIEAELLEPRTRVKELERENLVGDLEARYMEALYLQTLKGSCSRDKSKFE-------------------LESLSVKRDTALWGAWCMFHDLSQEDAKVEYLRREGYLRD 491          
The following BLAST results are available for this feature:
BLAST of Ggra8843.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
R7QHG53.890e-11749.27Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A7S1TK856.280e-1628.68Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 453..487
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 474..495
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 467..504
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 82..121
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 61..168
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 125..151
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 36..48
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..35
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 49..53
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..53
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 54..504
NoneNo IPR availableTMHMMTMhelixcoord: 31..48

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000860_piloncontigtig00000860_pilon:486604..488118 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra8843.t1Ggra8843.t1Gracilaria gracilis GNS1m malemRNAtig00000860_pilon 486604..488118 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra8843.t1 ID=Ggra8843.t1|Name=Ggra8843.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=505bp
MGVKRRAMAMMAMAAKRADVPDARPSRRRRFAAYSLAFACMLALSLLLDV
RRAAERRRTPKLQLTLPSRTSLQSLADDPPADPAAPSAPAAVPATAAAPP
PPQPPSQPPSQPLPPSVPSPLPAVNDASAPSSLTTADSDQPARVDNPNPN
LSEQELKDDVDQLIAHVDQQEAIQASQLANSTSSAANASLADSTVSSNVV
ANVSASPPVARPMPVNASDIDVRLNSQQYFDDAQARLARMLADSHTKTLI
DENELRTLQALQLQATRGDCESASDRDAALFKTDAEAASNLDIERSDPLW
GAWCLFLGSYKTDAMRDFVTKQQVLEHRVGALREQVPQLNATDAHVEFDA
NAASLDDVMTPEQQSSLRANIDRIMSHLRDIDVRYLAALSLQATFGDCSP
YVPNTESEEGSEPVVQELRVLKEPLLDQTAVRREGAQWGAWCVLQGKKRA
TAASQLMQRVDMLLDQLSKSEAEASESSTEKASAEARDEKESPAEEVVVS
SSSR*
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