Ggra8842.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra8842.t1
Unique NameGgra8842.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length506
Homology
BLAST of Ggra8842.t1 vs. uniprot
Match: A0A2V3IX56 (E3 ubiquitin-protein ligase COP1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IX56_9FLOR)

HSP 1 Score: 468 bits (1204), Expect = 1.840e-158
Identity = 262/500 (52.40%), Postives = 335/500 (67.00%), Query Frame = 0
Query:   17 APLHGVA-LYRNVALDD-AISGLSPSLPRD----DDDAADHLLAQLLQRRLRADANRRALGACVTLRVLERVLADKRRELHAVQQQMQLLHADIERVRDVVAADSLASQLLHAHAQPPPLRARMSLLSRYHSDVRELYLRSAAADFPAA-----LTQLTDALVDATSVTTVRARATMASFDILASSHQLISSIQFNPSASLFATAGVAKSIKLFDFAPFVTPPSPASSSPLSXXXXXDPDPRSSAHHYPVLNVNTPSKVSCLAWGHQPTSLLAASMYNAHILMHDTDANTTVRSLTEHKSRVWYVHSSPQHPSLLISGSDDNTVRLWDTRQHTSTNVLKANASICCVKFNNFHPHQFAFGSADHNVYLHDVRRMDTPLSAFEGHWRAVSHVLFLNRSELISASTDSSCKLWNVDKQ-QPGLNYVGHSNNRNFVGLSGDADFFACGSEDNAVYVYNKMFAGPVARYPFGSSGSFVSTVAWKPETKWVVAANNTGSIEILEL 504
            APLH  A L+ + ALD  A S +S + P D    DD AAD LLAQL+QRR R      AL A + L  L R  A+KRR+L  +Q+Q++ +H DI  +R  V    L  Q L   + PP LR R  LL RYH +VR++YLR   AD P       L  ++D L+DATS+T+V+ RAT+++ DILA++  L++SIQFN  AS+FATA V+K+IKLFDFA  +  P+                P S++HHYP+L V TPSK+SCLAW   PTS LAASMYN  IL+HD   N ++RSL  H S +W +HS+ Q+P+ LIS S D +V + DTRQ T  + +   AS+CCVKFN F  H FAFGSADH +Y +D R+M+ PLS F  H RAVS +LF +R++L+SAS D+SCKLW+V  Q QP L Y GH N RNFVGL GDA FFACGSEDN+VYVYN  F GPV  YPF   G+FVS+VAWKP ++W+VAANNTG+++ILEL
Sbjct:    4 APLHSAAQLHPSRALDVLARSAVSDAPPLDVSLLDDPAADALLAQLVQRRCRRRQTSAALAAHLLLPFLARCRAEKRRQLSLLQRQLRRIHLDISHLRTTVKPTQLPCQPLTPTSHPPLLRDRARLLQRYHPNVRDIYLR---ADHPHQRHANPLNHVSDLLLDATSITSVQPRATISNPDILANTPTLVTSIQFNQDASIFATASVSKTIKLFDFASLLNQPN---------------SPPSNSHHYPILRVPTPSKISCLAWISDPTSQLAASMYNGSILLHDVHQNKSIRSLNHHNSTIWGIHSTSQNPTQLISASHDKSVAICDTRQFTPIHTIHTPASVCCVKFNPFDAHHFAFGSADHTIYYYDTRQMNDPLSVFNSHSRAVSQLLFQSRTQLVSASIDASCKLWDVHAQSQPLLTYEGHCNRRNFVGLCGDARFFACGSEDNSVYVYNTSFCGPVVTYPFAVPGAFVSSVAWKPHSRWLVAANNTGTVQILEL 485          
BLAST of Ggra8842.t1 vs. uniprot
Match: R7QIS0 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QIS0_CHOCR)

HSP 1 Score: 430 bits (1105), Expect = 2.430e-144
Identity = 224/383 (58.49%), Postives = 273/383 (71.28%), Query Frame = 0
Query:  125 AQPPPLRARMSLLSRYHSDVRELYL--RSAAADFPAALTQLTDALVDATSVTTVRARATMASFDILASSHQLISSIQFNPSASLFATAGVAKSIKLFDFAPFVTPPSPASSSPLSXXXXXDPDPRSSAHHYPVLNVNTPSKVSCLAWGHQPTSLLAASMYNAHILMHDTDANTTVRSLTEHKSRVWYVHSSPQHPSLLISGSDDNTVRLWDT-RQHTSTNVLKANASICCVKFNNFHPHQFAFGSADHNVYLHDVRRMDTPLSAFEGHWRAVSHVLFLNRSELISASTDSSCKLWNVDKQQPGLNYVGHSNNRNFVGLSGDADFFACGSEDNAVYVYNKMFAGPVARYPFGSSGSFVSTVAWKPETKWVVAANNTGSIEILEL 504
            + PP L  R  L++RY  +V   Y   RSA  D   AL ++T+ LVDATSV+ V  R+++   DIL S+H LISSI+FN  A+LFATAGV K IK+FDF   +    PAS +              + HHYP+L + T SK+SCL+W  + TS+LAAS Y   IL+HDT+ NT +++L EH  R WYV  S   P+LL+SGSDD TV+LWD  RQ  S   L+  A++CCVKFN    H+FAFGSADHNVY +D+R   TPL  FEGHWRAVSHVLF+NRSELISASTDSSCKLWNV KQ+PGL+Y GH+NNRNFVGLSG  DFFACGSEDN++YVYNK FAGPV RY FGS   FVSTVAWKP++  +VAANNTG IE+LE+
Sbjct:   60 SMPPELSTRNQLIARYRDNVETAYFQRRSAPDDDYRALEEITNMLVDATSVSGVTKRSSIQHIDILRSNHNLISSIEFNTPATLFATAGVTKRIKVFDFNTML----PASETD-----------DLNHHHYPILEIPTVSKLSCLSWSRKQTSILAASTYKGDILIHDTETNTQLKALREHTQRTWYVDFSLLRPTLLLSGSDDRTVKLWDVDRQSESVMTLQTKANVCCVKFNPHESHEFAFGSADHNVYSYDLRHPRTPLCVFEGHWRAVSHVLFMNRSELISASTDSSCKLWNVQKQEPGLSYAGHTNNRNFVGLSGRGDFFACGSEDNSLYVYNKRFAGPVVRYGFGSRAEFVSTVAWKPDSNVLVAANNTGGIEVLEV 427          
BLAST of Ggra8842.t1 vs. uniprot
Match: E3 ubiquitin-protein ligase RFWD2-like isoform X1 n=3 Tax=Priapulus caudatus TaxID=37621 RepID=UPI000719DEB1 (E3 ubiquitin-protein ligase RFWD2-like isoform X1 n=3 Tax=Priapulus caudatus TaxID=37621 RepID=UPI000719DEB1)

HSP 1 Score: 244 bits (624), Expect = 4.580e-70
Identity = 143/395 (36.20%), Postives = 214/395 (54.18%), Query Frame = 0
Query:  130 LRARMSLLSRYHSDVRELYLRSAAADFPAA-------LTQLTDALVDATSVTTVRARATMASFDILASSHQLISSIQFNPSASLFATAGVAKSIKLFDFAPFVTPPSPASSSPLSXXXXXDPDPRSSAHHYPVLNVNTPSKVSCLAWGHQPTSLLAASMYNAHILMHDTDANTTVRSLTEHKSRVWYVHSSPQHPSLLISGSDDNTVRLWDTRQHTSTNVLKANASICCVKFNNFHPHQFAFGSADHNVYLHDVRRMDTPLSAFEGHWRAVSHVLFLNRSELISASTDSSCKLWNVDKQQPGLNYVGHSNNRNFVGLSGDADFFACGSEDNAVYVYNKMFAGPVARYPFGS-------------SGSFVSTVAWKPETKWVVAANNTGSIEILEL 504
            + AR   ++++  D+ + YL +   +F          L + TD+L   T  +++R  AT++  + + +   ++SSI+F+     FA AGV K IK+F++              +      D        HYPV+ +   SK+SC++W     S LA+S Y   + + D    ++V+S  EH+ R W V  + Q P LL SGSDD  V+LW T    S   L+A A++CCVKFN       AFGSADH V+ +D+R    PL  F+GH +AVS+  F+N  E++SASTDS  KLWNV K      + GHSN +NFVGLS D D+ ACGSE+N++YVY K  +  +  + F +             +  FVS V W+  +  +VAAN+ G+I++LEL
Sbjct:  258 MAARRQRVAQHFEDLEQCYLSTRLKEFQQGDQTSAEGLEEFTDSLSKFTRYSSMRPLATLSYANDIYNGSSIVSSIEFDRDCDFFAIAGVTKKIKVFEYG-------------IVIRDVVD-------MHYPVVEMLCNSKISCVSWSPYYKSTLASSDYEGTVTIWDASIGSSVKSFQEHEKRCWSVDFNRQDPQLLASGSDDAKVKLWSTNMEHSVTSLEAKANVCCVKFNPSSRFHLAFGSADHCVHYYDLRNTKQPLCVFKGHRKAVSYAKFVNSEEIVSASTDSQLKLWNVSKSNCLRTFRGHSNEKNFVGLSSDGDYVACGSENNSLYVYYKGLSKHLLTFKFDTVRSVLEKDKKEEDTNEFVSAVCWRGGSNVMVAANSQGTIKVLEL 632          
BLAST of Ggra8842.t1 vs. uniprot
Match: D3BFW7 (RING-type domain-containing protein n=1 Tax=Polysphondylium pallidum (strain ATCC 26659 / Pp 5 / PN500) TaxID=670386 RepID=D3BFW7_POLPP)

HSP 1 Score: 248 bits (632), Expect = 1.000e-69
Identity = 135/322 (41.93%), Postives = 192/322 (59.63%), Query Frame = 0
Query:  194 LISSIQFNPSASLFATAGVAKSIKLFDFAPFVTPPSPASSSPLSXXXXXDPDPRSSAHHYPVLNVNTPSKVSCLAWGHQPTSLLAASMYNAHILMHDTDANTTVRSLTEHKSRVWYVHSSPQHPSLLISGSDDNTVRLWDTRQHTSTNVLKANASICCVKFNNFHPHQFAFGSADHNVYLHDVRRMDTPLSAFEGHWRAVSHVLFLNRSELISASTDSSCKLWNVDKQQPGLNYVGHSNNRNFVGLSGDADFFACGSEDNAVYVYNKMFAGPVARYPFGS-SGS----------FVSTVAWKPETKWVVAANNTGSIEILEL 504
            ++SSI+F+     FATAGV K IK+F++A             L+     D        H P+  +   SK+SCL+W     S +A+S Y   I + D +    V S+ EH+ RVW V  S   P+ L SGSDD  V+LW T    +   +++ A+ICCVKFN    H  AFGSADH+++ +D+R    PLS F+GH +AVS+V F+NR E+ISASTDS+ KLWNV++ +    YVGH+N +NFVGL+   D+  CGSE+N VY Y K  + P+  + FG+ SGS          FVS+V WK ++  ++AAN+ G+I++LEL
Sbjct:  526 IVSSIEFDKDDEFFATAGVTKKIKVFEYAQ------------LNIRDHVD-------IHVPIKEMTCRSKISCLSWNTYIKSQIASSDYEGIITLWDVNTGQDVMSMEEHEKRVWSVDFSRTDPTQLASGSDDTRVKLWSTTSKRAITTIESKANICCVKFNPSSSHLIAFGSADHHIHYYDLRHPKEPLSIFKGHRKAVSYVKFMNREEIISASTDSTLKLWNVNQNECVRTYVGHANEKNFVGLTVSGDYICCGSENNGVYTYYKTLSKPIVTHRFGANSGSGEETDDDGSQFVSSVCWKKDSNILLAANSQGNIKVLEL 828          
BLAST of Ggra8842.t1 vs. uniprot
Match: hypothetical protein n=1 Tax=Acytostelium subglobosum LB1 TaxID=1410327 RepID=UPI0006449493 (hypothetical protein n=1 Tax=Acytostelium subglobosum LB1 TaxID=1410327 RepID=UPI0006449493)

HSP 1 Score: 246 bits (627), Expect = 2.030e-69
Identity = 136/322 (42.24%), Postives = 188/322 (58.39%), Query Frame = 0
Query:  194 LISSIQFNPSASLFATAGVAKSIKLFDFAPFVTPPSPASSSPLSXXXXXDPDPRSSAHHYPVLNVNTPSKVSCLAWGHQPTSLLAASMYNAHILMHDTDANTTVRSLTEHKSRVWYVHSSPQHPSLLISGSDDNTVRLWDTRQHTSTNVLKANASICCVKFNNFHPHQFAFGSADHNVYLHDVRRMDTPLSAFEGHWRAVSHVLFLNRSELISASTDSSCKLWNVDKQQPGLNYVGHSNNRNFVGLSGDADFFACGSEDNAVYVYNKMFAGPVARYPFGS-SGS----------FVSTVAWKPETKWVVAANNTGSIEILEL 504
            ++SSI+F+     FATAGV K IK+F++A             LS     D        H PV  +   SK+SCL+W     S +A+S Y   I + D +    + S+ EH+ RVW V  S   P+ L SGSDD  V+LW T    S   +++ A+ICCVKFN    H  AFGSADH+++ +D+R    PL  F+GH +AVS+V F+NR E+ISASTDS+ KLWNV +      YVGH+N +NFVGL+   D+  CGSE+N VY Y K  + P+  + FG+ SGS          FVS+V WK  +  ++AAN+ G+I++LEL
Sbjct:  465 IVSSIEFDKDDEFFATAGVTKKIKVFEYAQ------------LSLRDHVDV-------HVPVKEMTCHSKISCLSWNTYIKSQIASSDYEGIITLWDVNTGQNIMSMEEHEKRVWSVDFSRTDPTQLASGSDDTRVKLWSTTARRSIATIESKANICCVKFNPSSSHLIAFGSADHHIHYYDLRHTKDPLFIFKGHRKAVSYVKFMNRDEIISASTDSTLKLWNVSQSDCVRTYVGHANEKNFVGLTVSGDYICCGSENNGVYTYYKTLSKPIVTHRFGATSGSGEETDDDGSQFVSSVCWKKNSNILLAANSQGNIKVLEL 767          
BLAST of Ggra8842.t1 vs. uniprot
Match: A0A0K9NS29 (Constitutively photomorphogenic 1 n=1 Tax=Zostera marina TaxID=29655 RepID=A0A0K9NS29_ZOSMR)

HSP 1 Score: 242 bits (618), Expect = 1.410e-68
Identity = 128/325 (39.38%), Postives = 193/325 (59.38%), Query Frame = 0
Query:  191 SHQLISSIQFNPSASLFATAGVAKSIKLFDFAPFVTPPSPASSSPLSXXXXXDPDPRSSAHHYPVLNVNTPSKVSCLAWGHQPTSLLAASMYNAHILMHDTDANTTVRSLTEHKSRVWYVHSSPQHPSLLISGSDDNTVRLWDTRQHTSTNVLKANASICCVKFNNFHPHQFAFGSADHNVYLHDVRRMDTPLSAFEGHWRAVSHVLFLNRSELISASTDSSCKLWNVDKQQPGLNYVGHSNNRNFVGLSGDADFFACGSEDNAVYVYNKMFAGPVARYPFGS----------SGSFVSTVAWKPETKWVVAANNTGSIEILELS 505
            S  ++SSI+F+    LFATAGV+K IK+F+F+  V  P+                      H PV+ ++T SK+SCL+W     +++A+S Y   + + D +   +V    EH+ R W V  S   PS+L+SGSDD  V++W T+Q TS   +   A+ICCVK+N       A GSADHN++ +D+R + TPL  F+GH + VS+V FL+ +EL SASTDS+ +LW+V    P + + GH+N +NFVGL+ + D+ ACGSE N V+VY K  + P A + FG+          S  F+S V WK ++  ++ AN+ G+I++L L+
Sbjct:  402 SANIVSSIEFDRDDELFATAGVSKRIKVFEFSTVVNEPAEV--------------------HCPVVEMSTKSKLSCLSWNKYSKNIIASSDYEGIVTLWDVNTRQSVMEYEEHEKRAWSVDFSRTEPSMLVSGSDDCKVKVWCTKQETSVFNIDMKANICCVKYNPGSGVHIAVGSADHNIHYYDLRNISTPLHVFKGHNKTVSYVKFLSTNELASASTDSTLRLWDVQDNCPAMIFKGHTNEKNFVGLTVNKDYLACGSETNEVFVYQKAISKPAAGHKFGAFNLNDIDNDTSSYFISAVCWKSDSPTLLTANSQGAIKVLVLA 706          
BLAST of Ggra8842.t1 vs. uniprot
Match: A0A835LJD3 (Uncharacterized protein n=1 Tax=Coptis chinensis TaxID=261450 RepID=A0A835LJD3_9MAGN)

HSP 1 Score: 234 bits (598), Expect = 3.660e-68
Identity = 143/392 (36.48%), Postives = 217/392 (55.36%), Query Frame = 0
Query:  124 HAQPPPLRARMSLLSRYHSDVRELYLRSAAADFPAALTQLTDALVDATSVTTVRARATMASFDILASSHQLISSIQFNPSASLFATAGVAKSIKLFDFAPFVTPPSPASSSPLSXXXXXDPDPRSSAHHYPVLNVNTPSKVSCLAWGHQPTSLLAASMYNAHILMHDTDANTTVRSLTEHKSRVWYVHSSPQHPSLLISGSDDNTVRLWDTRQHTSTNVLKANASICCVKFNNFHPHQFAFGSADHNVYLHDVRRMDTPLSAFEGHWRAVSHVLFLNRSELISASTDSSCKLWNVDKQQPGLNYVGHSNNRNFVGLSGDADFFACGSEDNAVYVYNKMFAGPVARYPFGSS---------GS-FVSTVAWKPETKWVVAANNTGSIEILELS 505
            H Q   L   +  L   ++  RE Y      DF + LT  T         + +R  A +   D+  S++ ++SSI+F+    LFATAGV++ IK+F+F+  V  P+ A                    H P++ ++T SK+SCL+W     + +A+S Y   + + D     +V    EH+ R W V  S   PS+L+SGSDD  V++W T+Q  S   +   A+ICCVK+N       A GSADH+++ +D+R   TPL  F GH +AVS+V FL+  EL SASTDS+ +LW+V +  P   + GH+N +NFVGLS ++++ ACGSE N V+VY+K  + P A + F SS         GS F+S V WK ++  ++ AN+ G+I++L L+
Sbjct:   83 HTQRRSLVTPLDKLEDINALKREGY-HEGLEDFQSVLTTFT-------RYSRLRVIAELRHGDLFHSAN-IVSSIEFDRDDELFATAGVSRRIKVFEFSSVVNEPAEA--------------------HCPIVEMSTRSKLSCLSWNKYTKNHIASSDYEGIVTVWDVSTRQSVMEYEEHEKRAWSVDFSRTEPSMLVSGSDDCKVKVWCTKQEASVLNIDMKANICCVKYNPGSSIYVAVGSADHHIHYYDLRNTSTPLHVFSGHRKAVSYVKFLSNDELASASTDSTLRLWDVKENLPVRTFKGHTNEKNFVGLSVNSEYIACGSETNEVFVYHKAISKPAAWHKFSSSDMDDTDDDAGSYFISAVCWKSDSPTMLTANSQGTIKVLVLA 445          
BLAST of Ggra8842.t1 vs. uniprot
Match: A0A4Y7K1D8 (RING-type domain-containing protein n=4 Tax=Papaveroideae TaxID=1462614 RepID=A0A4Y7K1D8_PAPSO)

HSP 1 Score: 241 bits (614), Expect = 4.920e-68
Identity = 141/386 (36.53%), Postives = 216/386 (55.96%), Query Frame = 0
Query:  130 LRARMSLLSRYHSDVRELYLRSAAADFPAALTQLTDALVDATSVTTVRARATMASFDILASSHQLISSIQFNPSASLFATAGVAKSIKLFDFAPFVTPPSPASSSPLSXXXXXDPDPRSSAHHYPVLNVNTPSKVSCLAWGHQPTSLLAASMYNAHILMHDTDANTTVRSLTEHKSRVWYVHSSPQHPSLLISGSDDNTVRLWDTRQHTSTNVLKANASICCVKFNNFHPHQFAFGSADHNVYLHDVRRMDTPLSAFEGHWRAVSHVLFLNRSELISASTDSSCKLWNVDKQQPGLNYVGHSNNRNFVGLSGDADFFACGSEDNAVYVYNKMFAGPVARYPFGSS---------GS-FVSTVAWKPETKWVVAANNTGSIEILELS 505
            L+ R   +S+  +        S    + AAL      L   T  + +R  A +   D+  S++ ++SSI+F+    LFATAGV++ IK+F+FA  V  P+                      H PV+ ++T SK+SCL+W     + +A+S Y   + + D +   +V    EH+ R W V  S   PS+L+SGSDD  V++W T Q  S   +   A+ICCVK+N    +  A GSADH ++ +D+R +  PL  F GH +AVS+V FL+ +EL SASTDS+ +LW+V +  P   + GH+N +NFVGL+ ++++ ACGSE N V+VY+K  + P A Y FGSS         GS F+S V WK ++  ++ AN+ G+I++L L+
Sbjct:  338 LQKRRQWVSQTRNQQERSIYTSKREGYHAALEDFQSVLTTFTRYSRLRVIAELRHGDLFHSAN-IVSSIEFDRDDELFATAGVSRRIKVFEFASVVNEPADV--------------------HCPVVEMSTRSKLSCLSWNKFTKNHIASSDYEGIVTVWDVNTRQSVMEYEEHEKRAWSVDFSRTEPSMLVSGSDDCKVKVWCTNQEASVLNIDMKANICCVKYNPGSSYHVAVGSADHQIHYYDLRNVSAPLHVFSGHRKAVSYVKFLSNNELASASTDSTLRLWDVKENVPVRTFRGHTNEKNFVGLTVNSEYIACGSETNEVFVYHKAISKPAAGYKFGSSELDDTDDDAGSYFISAVCWKSDSPTMLTANSQGTIKVLVLA 702          
BLAST of Ggra8842.t1 vs. uniprot
Match: A0A152A6R0 (RING-type domain-containing protein n=1 Tax=Tieghemostelium lacteum TaxID=361077 RepID=A0A152A6R0_9MYCE)

HSP 1 Score: 243 bits (620), Expect = 5.420e-68
Identity = 130/323 (40.25%), Postives = 187/323 (57.89%), Query Frame = 0
Query:  194 LISSIQFNPSASLFATAGVAKSIKLFDFAPFVTPPSPASSSPLSXXXXXDPDPRSSAH-HYPVLNVNTPSKVSCLAWGHQPTSLLAASMYNAHILMHDTDANTTVRSLTEHKSRVWYVHSSPQHPSLLISGSDDNTVRLWDTRQHTSTNVLKANASICCVKFNNFHPHQFAFGSADHNVYLHDVRRMDTPLSAFEGHWRAVSHVLFLNRSELISASTDSSCKLWNVDKQQPGLNYVGHSNNRNFVGLSGDADFFACGSEDNAVYVYNKMFAGPVARYPFGSSGS-----------FVSTVAWKPETKWVVAANNTGSIEILEL 504
            ++SSI+F+     FATAGV K IK+F+FA                        R     H P+  +   SK+SCL+W     S +A+S Y   I + D +    V +L EH+ RVW V  S   P+ L SGSDD  V+LW T    +   + + A+ICCVKFN    H  AFGSADH+++ +D+R+   PL  F+GH +AVS+V F+N+ E+ISASTDS+ KLWNV+K +    + GHSN +NFVGL+ + D+  CGSE+N VY Y K  + P+  + FG++             FVS+V WK ++  ++AAN+ G+I++LEL
Sbjct:  533 IVSSIEFDRDDEFFATAGVTKKIKIFEFAQI----------------------RDHVEVHAPMKEMTCRSKISCLSWNTYVKSQIASSDYEGIISLWDVNTGQNVATLEEHEKRVWSVDFSKSDPTQLASGSDDTKVKLWSTNSDRAITTIDSKANICCVKFNPSSAHLIAFGSADHHIHYYDLRQYKEPLFIFKGHRKAVSYVKFMNKDEIISASTDSTLKLWNVNKTECVRTFTGHSNEKNFVGLTVNGDYICCGSENNGVYTYYKTLSKPIVTHRFGTNSGAGEETDDDGSQFVSSVCWKKDSNILLAANSQGNIKVLEL 833          
BLAST of Ggra8842.t1 vs. uniprot
Match: A0A2P1E8V7 (Constitutive photomorphogenesis 1 n=4 Tax=Artemisiinae TaxID=886714 RepID=A0A2P1E8V7_CHRLV)

HSP 1 Score: 239 bits (611), Expect = 5.770e-68
Identity = 130/325 (40.00%), Postives = 192/325 (59.08%), Query Frame = 0
Query:  191 SHQLISSIQFNPSASLFATAGVAKSIKLFDFAPFVTPPSPASSSPLSXXXXXDPDPRSSAHHYPVLNVNTPSKVSCLAWGHQPTSLLAASMYNAHILMHDTDANTTVRSLTEHKSRVWYVHSSPQHPSLLISGSDDNTVRLWDTRQHTSTNVLKANASICCVKFNNFHPHQFAFGSADHNVYLHDVRRMDTPLSAFEGHWRAVSHVLFLNRSELISASTDSSCKLWNVDKQQPGLNYVGHSNNRNFVGLSGDADFFACGSEDNAVYVYNKMFAGPVARYPFGS---------SGS-FVSTVAWKPETKWVVAANNTGSIEILELS 505
            S  ++SSI+F+    +FATAGV++ IK+F+F+  V  P  A                    H PV+ ++T SK+SCL+W     + +A+S Y   + + D +   +V    EH+ RVW V  S Q PS+L+SGSDD  V++W TRQ +S   +   A+ICCVKFN       A GS DH+++ +D+R    P+  F GH + VS+V FL+  EL SASTDS+ +LW+V +  P   + GH+N +NFVGLS + DF ACGSE N VY Y+K  + P+  + FG+         SGS F+S V WK ++  ++AAN+ G+I++L L+
Sbjct:  353 SANIVSSIEFDRDDEMFATAGVSRRIKVFNFSTIVNEPPEA--------------------HCPVVEISTRSKLSCLSWNKHTKNHIASSDYEGTVFVWDVNTRQSVMEYEEHEKRVWSVDYSRQEPSMLVSGSDDCKVKIWSTRQESSAMNIDMKANICCVKFNPGSSTHVAVGSVDHHIHYYDLRNTSHPIHIFSGHQKTVSYVKFLSNDELASASTDSTLRLWDVKRYLPVRTFRGHTNEKNFVGLSVNNDFLACGSETNEVYGYHKAISKPLTWHRFGTPNVDDSDDDSGSYFISAVCWKSDSPTMLAANSLGTIKVLVLA 657          
The following BLAST results are available for this feature:
BLAST of Ggra8842.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IX561.840e-15852.40E3 ubiquitin-protein ligase COP1 n=1 Tax=Gracilari... [more]
R7QIS02.430e-14458.49Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
E3 ubiquitin-protein ligase RFWD2-like isoform X1 n=3 Tax=Priapulus caudatus TaxID=37621 RepID=UPI000719DEB14.580e-7036.20E3 ubiquitin-protein ligase RFWD2-like isoform X1 ... [more]
D3BFW71.000e-6941.93RING-type domain-containing protein n=1 Tax=Polysp... [more]
hypothetical protein n=1 Tax=Acytostelium subglobosum LB1 TaxID=1410327 RepID=UPI00064494932.030e-6942.24hypothetical protein n=1 Tax=Acytostelium subglobo... [more]
A0A0K9NS291.410e-6839.38Constitutively photomorphogenic 1 n=1 Tax=Zostera ... [more]
A0A835LJD33.660e-6836.48Uncharacterized protein n=1 Tax=Coptis chinensis T... [more]
A0A4Y7K1D84.920e-6836.53RING-type domain-containing protein n=4 Tax=Papave... [more]
A0A152A6R05.420e-6840.25RING-type domain-containing protein n=1 Tax=Tieghe... [more]
A0A2P1E8V75.770e-6840.00Constitutive photomorphogenesis 1 n=4 Tax=Artemisi... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 76..103
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 230..245
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 230..254
NoneNo IPR availablePROSITEPS50294WD_REPEATS_REGIONcoord: 300..335
score: 10.390142
IPR020472G-protein beta WD-40 repeatPRINTSPR00320GPROTEINBRPTcoord: 320..334
score: 42.86
coord: 404..418
score: 34.71
coord: 446..460
score: 22.52
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 420..459
e-value: 1.7
score: 15.6
coord: 336..375
e-value: 0.25
score: 20.4
coord: 293..333
e-value: 6.5E-8
score: 42.3
coord: 462..503
e-value: 150.0
score: 3.2
coord: 379..417
e-value: 0.24
score: 20.5
coord: 181..220
e-value: 0.43
score: 19.3
coord: 251..290
e-value: 360.0
score: 0.9
IPR001680WD40 repeatPFAMPF00400WD40coord: 296..333
e-value: 1.6E-5
score: 25.5
coord: 423..459
e-value: 0.2
score: 12.6
coord: 382..417
e-value: 0.031
score: 15.2
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 300..342
score: 13.148488
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 386..419
score: 8.770704
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 164..505
e-value: 8.1E-90
score: 303.1
IPR042755E3 ubiquitin-protein ligase COP1PANTHERPTHR44080E3 UBIQUITIN-PROTEIN LIGASE COP1coord: 156..503
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 320..334
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 404..418
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 188..502

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000860_piloncontigtig00000860_pilon:484570..486280 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra8842.t1Ggra8842.t1Gracilaria gracilis GNS1m malemRNAtig00000860_pilon 484570..486280 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra8842.t1 ID=Ggra8842.t1|Name=Ggra8842.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=506bp
MAAASGADGAAARATRAPLHGVALYRNVALDDAISGLSPSLPRDDDDAAD
HLLAQLLQRRLRADANRRALGACVTLRVLERVLADKRRELHAVQQQMQLL
HADIERVRDVVAADSLASQLLHAHAQPPPLRARMSLLSRYHSDVRELYLR
SAAADFPAALTQLTDALVDATSVTTVRARATMASFDILASSHQLISSIQF
NPSASLFATAGVAKSIKLFDFAPFVTPPSPASSSPLSPPSPSDPDPRSSA
HHYPVLNVNTPSKVSCLAWGHQPTSLLAASMYNAHILMHDTDANTTVRSL
TEHKSRVWYVHSSPQHPSLLISGSDDNTVRLWDTRQHTSTNVLKANASIC
CVKFNNFHPHQFAFGSADHNVYLHDVRRMDTPLSAFEGHWRAVSHVLFLN
RSELISASTDSSCKLWNVDKQQPGLNYVGHSNNRNFVGLSGDADFFACGS
EDNAVYVYNKMFAGPVARYPFGSSGSFVSTVAWKPETKWVVAANNTGSIE
ILELS*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR020472G-protein_beta_WD-40_rep
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR042755COP1
IPR019775WD40_repeat_CS
IPR036322WD40_repeat_dom_sf