Ggra8840.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra8840.t1
Unique NameGgra8840.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length506
Homology
BLAST of Ggra8840.t1 vs. uniprot
Match: A0A2V3IUA0 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IUA0_9FLOR)

HSP 1 Score: 564 bits (1454), Expect = 3.850e-196
Identity = 285/493 (57.81%), Postives = 359/493 (72.82%), Query Frame = 0
Query:   11 LSADAQLQIAAHLSPRDRFALAQTSHTLFRTVWPPDVRHLLTARFPFETRIDLRVQPSQPAQPALRLVPSRSQQAHLSLAVSQDGALIAVLPYDNRLRLLHAPSRHVLAELPVTAHTPELVDVHSARRAPSPRSEQLVYAQSAALDVPPMLCFSSRVLLLVTPYALSLLSVPTLKCVARTELRAVRAMMPHIGQGAVVGAAGAVSPDGQLVAWVLFASLPANAYVSIWRRCPGSSVLQLLCVRAVATVRPQNWSTLGWARCVFSPNGHHVLLVANLAEHLVRVMRVGNQFHRKKMCRYRLALLDVRHLYQSNDDSCFTVLRQVDELLELTTEQHGEQLSHALLRMLNDVDVYPDAHCEGIRHRERGMALNCVHTCPAEATYKALMFGDRSLHPWFVTKQPQYSFHFSAKGGRVIVTSLPQNNFVHPYVHDAPPLQAQSGRKGRLHAFKRMPWRSAFAAASAFSENGQWLVGGCLLDGDACCVCVRNVTVDEYF 503
            LS DAQ Q+A HL+PRDRFALAQTS TLFRTVWP D+R  LTA   FETR+D+ +QP  P++   RLVPSRS Q HL+LAVS D +LIAVLPYDN LRL+H P+R  +A+L V AH PEL D+  ARRAP+PR   LVYAQSAALDVPP L F ++ LLL +P  + +LSVP+L C AR   R +   +PH+    VV A  A+SPD  L+A VL+A  PA AY+S+WR        QLL V+ VA VR +NWSTLGWARC FSPNG++++++AN AEH VR+ RVG+QFHR  +CR+ L+L D++  Y ++  +  T  RQ+DE L+L+ E H  QLS  +LR++ ++ +YPD     ++ R RGM  NC+H+CPAEATYKAL F DRS+HPWFVTKQPQ S HFSA G RV+  +LPQNNFV  +   +  ++    RKGRL+AFKRMPWRSAFAA S+FS NG WL+GGCLLD DACCV VRN+T+DEY+
Sbjct:   10 LSVDAQQQVARHLAPRDRFALAQTSRTLFRTVWPNDIRQQLTAFHAFETRLDIALQPHLPSK--RRLVPSRSHQTHLTLAVSSDASLIAVLPYDNYLRLIHVPTRDTVAQLAVEAHAPELWDIVRARRAPAPRHGALVYAQSAALDVPPALTFVNQHLLLCSPRQVHVLSVPSLSCEARLMSRDMNDALPHVVDTPVVAACAALSPDANLLACVLYAHQPAVAYLSLWRIVRSQQTPQLLGVQPVAPVRARNWSTLGWARCNFSPNGNYLIVIANTAEHSVRMSRVGDQFHRINLCRFALSLFDMQPFYHTSQPA-LTPCRQLDEWLQLS-EHHAAQLSQLVLRLVQNLSLYPDLQPTTVQLRSRGMVFNCIHSCPAEATYKALSFSDRSVHPWFVTKQPQCSLHFSACGDRVVAANLPQNNFVRRFERGSTSVEMLPYRKGRLYAFKRMPWRSAFAAVSSFSTNGTWLIGGCLLDNDACCVSVRNITIDEYY 498          
BLAST of Ggra8840.t1 vs. uniprot
Match: R7QKF9 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QKF9_CHOCR)

HSP 1 Score: 219 bits (557), Expect = 1.030e-63
Identity = 124/322 (38.51%), Postives = 176/322 (54.66%), Query Frame = 0
Query:  208 VGAAGAVSPDGQLVAWVLFASLPANAYVSIWRRCPGSSVLQ--LLCVRAVATVRPQNWSTLGWARCVFSPNGHHVLLVANLAEHLVRVMRVGNQFHRKKMCRYRLALLDVRHLYQSNDDSCFTVLRQVDELLELTTEQHGEQLSHALLRMLNDVDVYPD-AHCEGI---------RHRERGMALNCVHTCPAEATYKALMFGDRSLHPWFVTKQPQYSFHFSAKGGRVIVTSLPQNNFVHPYVH-----DAPPLQAQS--------GRKGRLHAFKRMPWRSAFAAASAFSENGQWLVGGCLLDGDACCVCVRNVTVDEYFG 504
            VG   A+SPDG+ +AWV+FA  P+  Y+++W      SV +  ++ +  V  + P+ WS LGWAR VFSPNG + ++V N A+ ++RV  V  +  R K+CR+  A+ ++     S D     V  + D  LE++     + L  A+   +  + ++   AH  G          ++ E  + LNC+H+CP EA+YKAL FG  + HPWFVTKQP YSF F   G RV V + P  N +   V      D   ++ Q         G   R H FK MPWR++FA  +AFS  G+W+ G  LLD D CCVCVRNVT+ E FG
Sbjct:    5 VGGTAALSPDGERLAWVVFAGSPSKVYLTVW------SVRESCVISISEVTKIYPRRWSALGWARVVFSPNGRYCIVVVNCAKKVLRVESVDGEIARTKLCRFVTAVFEM-----SGDRGALPVRERCD-WLEMSPGTFAQGLCAAVTSAVQGLVLHVGTAHLFGEDKVLLSRRRQYHESALLLNCIHSCPGEASYKALSFGRATRHPWFVTKQPMYSFLFDMAGKRVHVATSPHANAMLTMVKMDGEKDGFEVEQQKEERRRWRDGPVKRRHVFKNMPWRTSFATVTAFSLTGKWIAGASLLDADKCCVCVRNVTLTELFG 314          
The following BLAST results are available for this feature:
BLAST of Ggra8840.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3IUA03.850e-19657.81Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QKF91.030e-6338.51Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011044Quinoprotein amine dehydrogenase, beta chain-likeSUPERFAMILY50969YVTN repeat-like/Quinoprotein amine dehydrogenasecoord: 83..489

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000860_piloncontigtig00000860_pilon:477859..479376 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra8840.t1Ggra8840.t1Gracilaria gracilis GNS1m malemRNAtig00000860_pilon 477859..479376 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra8840.t1 ID=Ggra8840.t1|Name=Ggra8840.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=506bp
MRASSPTLAQLSADAQLQIAAHLSPRDRFALAQTSHTLFRTVWPPDVRHL
LTARFPFETRIDLRVQPSQPAQPALRLVPSRSQQAHLSLAVSQDGALIAV
LPYDNRLRLLHAPSRHVLAELPVTAHTPELVDVHSARRAPSPRSEQLVYA
QSAALDVPPMLCFSSRVLLLVTPYALSLLSVPTLKCVARTELRAVRAMMP
HIGQGAVVGAAGAVSPDGQLVAWVLFASLPANAYVSIWRRCPGSSVLQLL
CVRAVATVRPQNWSTLGWARCVFSPNGHHVLLVANLAEHLVRVMRVGNQF
HRKKMCRYRLALLDVRHLYQSNDDSCFTVLRQVDELLELTTEQHGEQLSH
ALLRMLNDVDVYPDAHCEGIRHRERGMALNCVHTCPAEATYKALMFGDRS
LHPWFVTKQPQYSFHFSAKGGRVIVTSLPQNNFVHPYVHDAPPLQAQSGR
KGRLHAFKRMPWRSAFAAASAFSENGQWLVGGCLLDGDACCVCVRNVTVD
EYFGG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011044Quino_amine_DH_bsu