Ggra8835.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra8835.t1
Unique NameGgra8835.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length1693
Homology
BLAST of Ggra8835.t1 vs. uniprot
Match: A0A2V3IX67 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IX67_9FLOR)

HSP 1 Score: 519 bits (1336), Expect = 3.170e-151
Identity = 328/725 (45.24%), Postives = 441/725 (60.83%), Query Frame = 0
Query:  106 SSRMPMALRRIGASPEVMKSPHIA---------SSYNLRSRRRAVPSTRTDSVAMSRPAFLHKRDVENASSTTLRNVCNRFGIDATGTREEMRARALAKMAEKTADDFSARPTDEQDNPGPVTVDRECTDERTNCLTTSTTKKNLASVNDPIVRGVGDVHGKSDVPDADVNLPPAPPQMPLESKPARSWVTDRSVMEKPLGQGPPPTPPLSIPRAALPPRGLPPSPSNNLAESVDGSAPLNASNIFQDWFRTNRHLSAAEYNACVQALRGSVKEGKSLRRSTVKAPGCSGNLGVAMVPSAIAKRAPVR-SVTVGLPSPVAATVMRTGMPTTPGVRSSTGIPAS---NRLEVTQQVTQNEERRLDATESQQKRSTPVPNDVTSERNLPGVDYDLLRRLQRCSQSTPVDASSTAVRKETEGALNGERPLPPRFSGAVGGPNDRNIDRSGVARGSLENDKKKEKPPLDADWLDRLLGDKFKDIPMKENPQIGDMVTPQQLLKHFNEGPVPKTMPNNGNSGNVTARNGVR----KRTWDIRPHPRETVARIRKLNQERARQREWEERLRVLDKQKREEACRSMYQKNPIESESGGELIDLRNALNQKKTVYELARIRAGLQHPP-SXXXXXXXXXXXXXXXALKDDTSEMQ-VHARKPDCLPPLPPRLKKVRIKGKFTDAASFFGDASSD-------SSVDYERPPDEIILYNRIMRRKLKAQRKLKEK 804
            SSR+P+ +RRIGASP    + H A           YNLR RRR   ST TDSV MSRP F+HK DV+NAS++TLR +CNRFG+   G +E +RAR LAKMAEKT DDFSARP D+     PV  D +C     N +TTSTTKKNLAS+NDPIVRG GD+HGKSD P+AD N  P P      S+PARSW+TDRSVME+  GQ  PPTPPL++P  A+PPR  PPSP  +   SVD SAPL++  I QDW  ++R LS AEY+ACVQALR SVK+G S RR  ++ P  +G+ GV+MVPSA  +R PVR S +  LP    +   R  +P TPGVRSSTGIP+S   N  EVTQQ  +NE  R +      +  + VPND TSE  + G      RR Q+ +QS PV+  S+  ++E++ +      LP  F+GA GGP D NIDR  V     +   K+E   L+  W+++ L ++FKD PMKE+ + GDMV P+Q L HFNE   PK  P       + A N  R    K+ +   P PR+ + R++   ++RA +R+WEE+LR LD ++R++   +M+Q  P+ES  GGEL+D R ++ ++ T++E  R+RA L  PP S               A++D+   +Q    RKP+  P LPP +K+ RI G F   A+ F D+++           DYERP DE++      +++L+ ++K  EK
Sbjct:   70 SSRLPLEMRRIGASPH---NTHAAPPSXXXXXXGGYNLRPRRRPPHSTNTDSVMMSRPDFVHKGDVDNASTSTLRGICNRFGVTNAGNKEALRARILAKMAEKTVDDFSARPNDDLRASTPV-PDPDCDRNDPNVITTSTTKKNLASINDPIVRGAGDIHGKSDRPEADFNQLPLPAATLPSSQPARSWLTDRSVMERTFGQRAPPTPPLALPTGAVPPRPGPPSPRASPGVSVDVSAPLSSGAILQDWLSSHRQLSPAEYDACVQALRSSVKDGVSHRRPPMRVPVAAGSFGVSMVPSATGRRMPVRPSTSAQLPLQAVSNAFRVPVPLTPGVRSSTGIPSSRYANAAEVTQQ-PRNEASRTEVVPDNHQVQSSVPNDTTSE--MKGASDGSRRRQQQTAQSLPVNMPSSHAKRESKASTLPHPALPSHFAGAAGGPGDNNIDRPAVP----DQGSKRETSGLE--WMNKFLSERFKDRPMKEDAKYGDMVPPEQTLHHFNEYQRPKDAPLP--PATMVAINEKRLSAAKKEFKFPPLPRDILKRMKAEREKRALERKWEEKLRGLDIEQRKKVRLAMWQNKPVESILGGELVDFRESVKKEPTLFE--RMRAKLAEPPKSPPLSMKAKRALAFLKAMRDENRNVQRSRVRKPEFAPSLPPSMKRQRISGGFFGTATPFRDSANGIQNQAAMQDDDYERPLDEVVRARMYKKKRLEQRQKELEK 777          
The following BLAST results are available for this feature:
BLAST of Ggra8835.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IX673.170e-15145.24Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 787..808
NoneNo IPR availableCOILSCoilCoilcoord: 638..658
NoneNo IPR availableCOILSCoilCoilcoord: 441..461
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1416..1439
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 297..321
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1451..1497
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1304..1318
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 193..209
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1211..1692
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1021..1047
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 862..879
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 494..554
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1581..1617
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 193..217
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1051..1066
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1126..1160
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 42..60
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1126..1184
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 895..911
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1319..1371
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 84..98
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 963..979
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1274..1296
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1513..1565
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 12..112
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1088..1111
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 447..479
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 251..329
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 801..1111
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1633..1665
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 813..835
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..17
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 13..17
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..12
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 18..1692

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000860_piloncontigtig00000860_pilon:461415..466493 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra8835.t1Ggra8835.t1Gracilaria gracilis GNS1m malemRNAtig00000860_pilon 461415..466493 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra8835.t1 ID=Ggra8835.t1|Name=Ggra8835.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=1693bp
MRRILFAAARALRGSGAQDGLSDDEESIADSEVAIPTAALPDEHQETTTA
AATATPPPPSSKVADTAPAHNLSPVRTVPAAPAQPSTTAPPPSSPTRPST
PTRRRSSRMPMALRRIGASPEVMKSPHIASSYNLRSRRRAVPSTRTDSVA
MSRPAFLHKRDVENASSTTLRNVCNRFGIDATGTREEMRARALAKMAEKT
ADDFSARPTDEQDNPGPVTVDRECTDERTNCLTTSTTKKNLASVNDPIVR
GVGDVHGKSDVPDADVNLPPAPPQMPLESKPARSWVTDRSVMEKPLGQGP
PPTPPLSIPRAALPPRGLPPSPSNNLAESVDGSAPLNASNIFQDWFRTNR
HLSAAEYNACVQALRGSVKEGKSLRRSTVKAPGCSGNLGVAMVPSAIAKR
APVRSVTVGLPSPVAATVMRTGMPTTPGVRSSTGIPASNRLEVTQQVTQN
EERRLDATESQQKRSTPVPNDVTSERNLPGVDYDLLRRLQRCSQSTPVDA
SSTAVRKETEGALNGERPLPPRFSGAVGGPNDRNIDRSGVARGSLENDKK
KEKPPLDADWLDRLLGDKFKDIPMKENPQIGDMVTPQQLLKHFNEGPVPK
TMPNNGNSGNVTARNGVRKRTWDIRPHPRETVARIRKLNQERARQREWEE
RLRVLDKQKREEACRSMYQKNPIESESGGELIDLRNALNQKKTVYELARI
RAGLQHPPSPPLPPRAKRALRFLKALKDDTSEMQVHARKPDCLPPLPPRL
KKVRIKGKFTDAASFFGDASSDSSVDYERPPDEIILYNRIMRRKLKAQRK
LKEKEEREGDNSINGGESSAVNGTDVVQPIAANMSDGNEKQRLEKKRSSV
PGNPSPQKTSDMLEGMRKETRERARHLSRSFNAKNPFKAPLEDKLGPSPV
DDSKSFEAHPKVSPKGFDAPPVSSSPFGTGKATFGRSERPAAEGNKDNYG
KPTTFQALDASKSDERGISKLEGKTSERKDAPPFLQPQVPRSFGFRTSSA
DKAKVKFNSGIFGQQGARDEEQNPVVDKGHRESGVQRKRKIEDVEAAPIS
FDRNPTNNSYSALFPTQVEREGQMRGVSDGVKDDIEPASSNGKTSIPSLP
SSTVPALANSQSPSVRFGKDISLEEAEQTTITGTGVKIRTATDRQRGHGS
NGTENVIHNPEPDEQAQEASLFSAEDPRPPVFGREAATIAKPKEDLKQNS
LGFNSFLSKPIDLHPKKNEEKTTEPNKFAFLPSKPKEASESAVVPPREGK
LGFEYSGKDAGPASAMFRIKATAPSTDQKPSDQCEQDPSVAKPAQNSGNP
FLGEKPDTKEERKSDATNPLSTKEQGPFTFDAANPSSKTLFEKPSFGSQN
TSENPFSLEKANSTGERPSEDVMATNESPVDRKESKSLFGIESSEPVAGG
KPFGGFKPPSVAPAPVFGSAQTQTPSAPFSFSKSVDSGQKQLGGPFGDSK
FGSSFKSTGPASSFVFGAGNPSHTANPSAAAQTPFSASASKPQTAPTKPN
PFAAPPDSSPFTAAPTGFGTSSQSQGFSFSGSSSAFGSSNPVDKPSAFGS
SNFGDSSTTGFGQGGSKPTFAFGTGPAGASAPTFVTPSGNAAPSPFGAPN
PTQSTFGAQSFGAQQESRPLFGATPGAPFPQGNPFGGNNNNSQSALSGRA
NEAPGGSNAFNAQVGQPSGPGAFAMGSTAGTRRKLKGRRMLR*
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