Ggra883.t2 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra883.t2
Unique NameGgra883.t2
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length996
Homology
BLAST of Ggra883.t2 vs. uniprot
Match: A0A2V3IZY7 (ATP-dependent Clp protease proteolytic subunit n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IZY7_9FLOR)

HSP 1 Score: 287 bits (735), Expect = 1.530e-86
Identity = 147/161 (91.30%), Postives = 153/161 (95.03%), Query Frame = 0
Query:  835 VAQLLFLEAENPSRTISMYINSPGGVVTAGLAIYDTMQYVAPDISTLCVGQACSMASLLLAAGTPGERRALPNARVMIHQPSGGAQGQASDIAIHATEILNLRKRLNGIYVKHTGRSLKEIETRMERDHFMSAEEADQFGLIDEVVHPRSKEENSASAQSA 995
            VAQLLFLEAENPSR ISMYINSPGGVVTAGLAIYDTMQYVAPDI+TLCVGQACSMASLLLAAG  G+RRALPNARVMIHQPSGGAQGQASDIAIHATEILNLRKRLN IYVKHTGR LKE+E+RMERDHFMSAEEA QFGLIDEVVHPRSK+ +S SAQSA
Sbjct:   87 VAQLLFLEAENPSRPISMYINSPGGVVTAGLAIYDTMQYVAPDIATLCVGQACSMASLLLAAGASGQRRALPNARVMIHQPSGGAQGQASDIAIHATEILNLRKRLNDIYVKHTGRDLKEVESRMERDHFMSAEEATQFGLIDEVVHPRSKDMHSVSAQSA 247          
BLAST of Ggra883.t2 vs. uniprot
Match: R7QB91 (ATP-dependent Clp protease proteolytic subunit n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QB91_CHOCR)

HSP 1 Score: 258 bits (660), Expect = 1.570e-75
Identity = 127/160 (79.38%), Postives = 147/160 (91.88%), Query Frame = 0
Query:  835 VAQLLFLEAENPSRTISMYINSPGGVVTAGLAIYDTMQYVAPDISTLCVGQACSMASLLLAAGTPGERRALPNARVMIHQPSGGAQGQASDIAIHATEILNLRKRLNGIYVKHTGRSLKEIETRMERDHFMSAEEADQFGLIDEVVHPRSKEENSASAQS 994
            VAQLLFLE+ENPSR I+MYINSPGGVV++GLAIYDTM+Y++  +STLCVGQACSMASLLLAAG PGERRALPN+RVMIHQPSGGAQGQASDIAIHATEIL+LRKRLN IY +HTG+SL+E+E+RMERDHFMSAE+A  FGLID VVHPR + E + +A+S
Sbjct:  108 VAQLLFLESENPSRQINMYINSPGGVVSSGLAIYDTMEYISAKVSTLCVGQACSMASLLLAAGAPGERRALPNSRVMIHQPSGGAQGQASDIAIHATEILSLRKRLNAIYAQHTGQSLREVESRMERDHFMSAEDARNFGLIDLVVHPRDRTEQALTAES 267          
BLAST of Ggra883.t2 vs. uniprot
Match: A0A2H6AYD9 (ATP-dependent Clp protease proteolytic subunit n=1 Tax=bacterium HR40 TaxID=2035435 RepID=A0A2H6AYD9_9BACT)

HSP 1 Score: 230 bits (587), Expect = 4.420e-66
Identity = 112/155 (72.26%), Postives = 133/155 (85.81%), Query Frame = 0
Query:  836 AQLLFLEAENPSRTISMYINSPGGVVTAGLAIYDTMQYVAPDISTLCVGQACSMASLLLAAGTPGERRALPNARVMIHQPSGGAQGQASDIAIHATEILNLRKRLNGIYVKHTGRSLKEIETRMERDHFMSAEEADQFGLIDEVVHPRSKEENSA 990
            AQLLFLEAENP + IS+YINSPGG+VT+GLAIYDTMQY+ P+++T+C+GQA SMASLLLAAG PG R ALP+AR+M HQPSGG QGQA+DI IHA EILNL++RLN IYVKHTGRSL EIE +MERD FMSA+EA +FG+IDEV+  R K+   A
Sbjct:   53 AQLLFLEAENPDKEISLYINSPGGIVTSGLAIYDTMQYIRPNVATICIGQAASMASLLLAAGAPGRRFALPHARIMTHQPSGGFQGQATDIEIHAREILNLKRRLNEIYVKHTGRSLAEIEAKMERDTFMSAQEAKEFGIIDEVIEKRPKKPQEA 207          
BLAST of Ggra883.t2 vs. uniprot
Match: A0A2E1CXR7 (ATP-dependent Clp protease proteolytic subunit n=1 Tax=Kordiimonas sp. TaxID=1970157 RepID=A0A2E1CXR7_9PROT)

HSP 1 Score: 227 bits (579), Expect = 5.620e-65
Identity = 110/148 (74.32%), Postives = 131/148 (88.51%), Query Frame = 0
Query:  836 AQLLFLEAENPSRTISMYINSPGGVVTAGLAIYDTMQYVAPDISTLCVGQACSMASLLLAAGTPGERRALPNARVMIHQPSGGAQGQASDIAIHATEILNLRKRLNGIYVKHTGRSLKEIETRMERDHFMSAEEADQFGLIDEVVHPR 983
            AQLLFLEAENP + IS+YINSPGGVVT+GLA+YDTMQY+ PD++TLC+GQACSM SLLLAAGT G+R ALPN+R+M+HQPSGGAQGQA+DI I A EIL+LR+RLNGIYVKHTG+ L+++E  +ERD+FMSAEEA  FGLID VV  R
Sbjct:   55 AQLLFLEAENPKKDISIYINSPGGVVTSGLAMYDTMQYIRPDVATLCIGQACSMGSLLLAAGTEGKRFALPNSRIMVHQPSGGAQGQATDIEIQAKEILSLRERLNGIYVKHTGQKLEKVEQALERDNFMSAEEAKDFGLIDVVVEKR 202          
BLAST of Ggra883.t2 vs. uniprot
Match: A0A3M2DKW9 (ATP-dependent Clp protease proteolytic subunit n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A3M2DKW9_9PROT)

HSP 1 Score: 224 bits (572), Expect = 5.510e-64
Identity = 110/151 (72.85%), Postives = 130/151 (86.09%), Query Frame = 0
Query:  835 VAQLLFLEAENPSRTISMYINSPGGVVTAGLAIYDTMQYVAPDISTLCVGQACSMASLLLAAGTPGERRALPNARVMIHQPSGGAQGQASDIAIHATEILNLRKRLNGIYVKHTGRSLKEIETRMERDHFMSAEEADQFGLIDEVVHPRSK 985
            VAQLLFLE+ENPS+ ISMYINSPGGVVT+GL+IYDTMQY+ P +STL +GQA SM SLLLAAG PG R ALPN+R+M+HQPSGG QGQASDIA+HA EIL L+ RLN IYVKHTG+ LK++E  ++RD+FM+AEEA  FGLIDE+V PR K
Sbjct:   54 VAQLLFLESENPSKEISMYINSPGGVVTSGLSIYDTMQYIKPKVSTLVIGQAASMGSLLLAAGEPGMRYALPNSRIMVHQPSGGFQGQASDIALHAKEILELKDRLNRIYVKHTGQPLKKVEQALDRDNFMTAEEAKAFGLIDEIVAPRDK 204          
BLAST of Ggra883.t2 vs. uniprot
Match: A0A501PSX8 (ATP-dependent Clp protease proteolytic subunit n=1 Tax=Emcibacter nanhaiensis TaxID=1505037 RepID=A0A501PSX8_9PROT)

HSP 1 Score: 223 bits (568), Expect = 2.050e-63
Identity = 112/167 (67.07%), Postives = 132/167 (79.04%), Query Frame = 0
Query:  818 ETYLKLVSAFHNTVQRHV-AQLLFLEAENPSRTISMYINSPGGVVTAGLAIYDTMQYVAPDISTLCVGQACSMASLLLAAGTPGERRALPNARVMIHQPSGGAQGQASDIAIHATEILNLRKRLNGIYVKHTGRSLKEIETRMERDHFMSAEEADQFGLIDEVVHPR 983
            E  + L    H+ V   + AQLLFLEAENP + IS YINSPGGVVT+GL IYDTMQY+ P ++T+C+GQACSM SLLLAAG PG+R ALPN+R+MIHQPSGGAQGQA+DI IHA EIL LRKRLN +YVKHTG+ L  IE  MERD+FMS E+A +FGLID+V   R
Sbjct:   36 ERIIFLTGQVHDGVASLITAQLLFLEAENPKKDISFYINSPGGVVTSGLGIYDTMQYIRPKVTTICIGQACSMGSLLLAAGEPGQRYALPNSRIMIHQPSGGAQGQATDIEIHAKEILELRKRLNNMYVKHTGQPLDVIEENMERDNFMSPEQAKEFGLIDQVYEKR 202          
BLAST of Ggra883.t2 vs. uniprot
Match: M2XM23 (ATP-dependent Clp protease proteolytic subunit n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2XM23_GALSU)

HSP 1 Score: 224 bits (572), Expect = 2.140e-63
Identity = 108/152 (71.05%), Postives = 131/152 (86.18%), Query Frame = 0
Query:  835 VAQLLFLEAENPSRTISMYINSPGGVVTAGLAIYDTMQYVAPDISTLCVGQACSMASLLLAAGTPGERRALPNARVMIHQPSGGAQGQASDIAIHATEILNLRKRLNGIYVKHTGRSLKEIETRMERDHFMSAEEADQFGLIDEVVHPRSKE 986
            VAQLLFLEAENP + + MYINSPGG VTAGLA+YDTMQY++P +ST+C+GQACSMASLLLAAG  GERR+LPN+R+MIHQPSGGA G ASDI+IHA EIL LRKRLN +Y  HTG+ +  IET+MERDHFMSA++A +FG++DEV+  R +E
Sbjct:   88 VAQLLFLEAENPEKKVYMYINSPGGSVTAGLAVYDTMQYISPPVSTICLGQACSMASLLLAAGEKGERRSLPNSRIMIHQPSGGATGPASDISIHANEILYLRKRLNELYAYHTGQDIATIETKMERDHFMSADDALKFGILDEVIVRRDQE 239          
BLAST of Ggra883.t2 vs. uniprot
Match: A9P1N5 (ATP-dependent Clp protease proteolytic subunit n=1 Tax=Picea sitchensis TaxID=3332 RepID=A9P1N5_PICSI)

HSP 1 Score: 224 bits (571), Expect = 2.760e-63
Identity = 111/149 (74.50%), Postives = 129/149 (86.58%), Query Frame = 0
Query:  835 VAQLLFLEAENPSRTISMYINSPGGVVTAGLAIYDTMQYVAPDISTLCVGQACSMASLLLAAGTPGERRALPNARVMIHQPSGGAQGQASDIAIHATEILNLRKRLNGIYVKHTGRSLKEIETRMERDHFMSAEEADQFGLIDEVVHPR 983
            VAQLLFLE+ENP + I+MYINSPGGVVTAGLAIYDTMQY+   ++TLC+GQA SM SLLLAAG+ GERRALPNARVMIHQPSGGA GQASDIAIHA EIL  R+RLNG+Y KHTG+++++IE  MERD FMS +EA +FGLIDEV+  R
Sbjct:   79 VAQLLFLESENPQKPINMYINSPGGVVTAGLAIYDTMQYIKSPVTTLCIGQAASMGSLLLAAGSHGERRALPNARVMIHQPSGGASGQASDIAIHAKEILKTRERLNGLYAKHTGQTIEKIEQFMERDTFMSPDEAKEFGLIDEVIEHR 227          
BLAST of Ggra883.t2 vs. uniprot
Match: A0A2E7K009 (ATP-dependent Clp protease proteolytic subunit n=1 Tax=Rickettsiales bacterium TaxID=2026788 RepID=A0A2E7K009_9RICK)

HSP 1 Score: 222 bits (566), Expect = 3.420e-63
Identity = 108/151 (71.52%), Postives = 128/151 (84.77%), Query Frame = 0
Query:  835 VAQLLFLEAENPSRTISMYINSPGGVVTAGLAIYDTMQYVAPDISTLCVGQACSMASLLLAAGTPGERRALPNARVMIHQPSGGAQGQASDIAIHATEILNLRKRLNGIYVKHTGRSLKEIETRMERDHFMSAEEADQFGLIDEVVHPRSK 985
            VAQLLFLE+ENP + I MYINSPGGVVTAGL++YDTMQY+ PD++TLC+GQACSM SLLLAAG  G+R A PNAR+MIHQPSGG QGQASDI IHA EI+NLRKRLN IYV HTG+ +  IE  MERD+FM AE+A +FGLID++V  R++
Sbjct:   50 VAQLLFLESENPEKDIYMYINSPGGVVTAGLSMYDTMQYIKPDVNTLCIGQACSMGSLLLAAGAAGKRFATPNARIMIHQPSGGFQGQASDIEIHAREIINLRKRLNQIYVNHTGQKMATIEKNMERDNFMPAEDAKKFGLIDDIVTSRAE 200          
BLAST of Ggra883.t2 vs. uniprot
Match: A0A2H6AV16 (ATP-dependent Clp protease proteolytic subunit n=1 Tax=bacterium HR39 TaxID=2035434 RepID=A0A2H6AV16_9BACT)

HSP 1 Score: 222 bits (565), Expect = 4.870e-63
Identity = 106/148 (71.62%), Postives = 128/148 (86.49%), Query Frame = 0
Query:  836 AQLLFLEAENPSRTISMYINSPGGVVTAGLAIYDTMQYVAPDISTLCVGQACSMASLLLAAGTPGERRALPNARVMIHQPSGGAQGQASDIAIHATEILNLRKRLNGIYVKHTGRSLKEIETRMERDHFMSAEEADQFGLIDEVVHPR 983
            AQLLFLEAENP + IS+YINSPGG+VTAGLAIYDTMQY+ PD+ T+C+GQA SM SLLLAAG PG+R ALP+AR+M HQPSGG QGQA+DI IHA EILNL+++LN IYV+HTGR+L+E+E +MERD FMS EEA +FG+ID V+  R
Sbjct:   50 AQLLFLEAENPEKDISLYINSPGGLVTAGLAIYDTMQYIRPDVVTICIGQAASMGSLLLAAGAPGKRFALPHARIMTHQPSGGFQGQATDIEIHAREILNLKRKLNEIYVRHTGRTLEEVEAKMERDTFMSTEEAREFGIIDAVIEKR 197          
The following BLAST results are available for this feature:
BLAST of Ggra883.t2 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IZY71.530e-8691.30ATP-dependent Clp protease proteolytic subunit n=1... [more]
R7QB911.570e-7579.38ATP-dependent Clp protease proteolytic subunit n=1... [more]
A0A2H6AYD94.420e-6672.26ATP-dependent Clp protease proteolytic subunit n=1... [more]
A0A2E1CXR75.620e-6574.32ATP-dependent Clp protease proteolytic subunit n=1... [more]
A0A3M2DKW95.510e-6472.85ATP-dependent Clp protease proteolytic subunit n=1... [more]
A0A501PSX82.050e-6367.07ATP-dependent Clp protease proteolytic subunit n=1... [more]
M2XM232.140e-6371.05ATP-dependent Clp protease proteolytic subunit n=1... [more]
A9P1N52.760e-6374.50ATP-dependent Clp protease proteolytic subunit n=1... [more]
A0A2E7K0093.420e-6371.52ATP-dependent Clp protease proteolytic subunit n=1... [more]
A0A2H6AV164.870e-6371.62ATP-dependent Clp protease proteolytic subunit n=1... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001907ATP-dependent Clp protease proteolytic subunitPRINTSPR00127CLPPROTEASEPcoord: 958..977
score: 54.88
coord: 849..869
score: 64.17
coord: 901..920
score: 59.62
coord: 880..897
score: 58.89
IPR001907ATP-dependent Clp protease proteolytic subunitHAMAPMF_00444ClpPcoord: 769..983
score: 34.43082
IPR001907ATP-dependent Clp protease proteolytic subunitCDDcd07017S14_ClpP_2coord: 835..979
e-value: 4.16705E-86
score: 272.008
NoneNo IPR availableGENE3D3.90.226.10coord: 820..988
e-value: 2.9E-66
score: 224.9
NoneNo IPR availablePANTHERPTHR10381:SF11ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT, MITOCHONDRIALcoord: 834..986
IPR023562Clp protease proteolytic subunit /Translocation-enhancing protein TepAPFAMPF00574CLP_proteasecoord: 829..981
e-value: 1.1E-69
score: 233.9
IPR023562Clp protease proteolytic subunit /Translocation-enhancing protein TepAPANTHERPTHR10381ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNITcoord: 834..986
IPR018215ClpP, Ser active sitePROSITEPS00381CLP_PROTEASE_SERcoord: 880..891
IPR033135ClpP, histidine active sitePROSITEPS00382CLP_PROTEASE_HIScoord: 902..915
IPR029045ClpP/crotonase-like domain superfamilySUPERFAMILY52096ClpP/crotonasecoord: 829..983

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000212_piloncontigtig00000212_pilon:51645..56733 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra883.t2Ggra883.t2Gracilaria gracilis GNS1m malemRNAtig00000212_pilon 51645..56733 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra883.t2 ID=Ggra883.t2|Name=Ggra883.t2|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=996bp
MSSSDDENQSVLSTDPMLYTETDELFDTGDETWGNSNATLAFQMPQTQDE
IVCQSVDHNAMEEIKRVVPVLRSRVSKSLHCSEDVLPTAAAGEIFDLLLH
GSFVQELLRVANNGLRETGSLECSVDELRTTIGVIAACAFYQTSFEDLTS
EGNSDVYSIGPIDVDRVKEIIRSVGIRETDFAMRNGNVTGSYDRDINGVE
EAFASVCCPLFYVNTMSFAADDDVTRQRSNDLSPLTGLRQVNLFKGRGAQ
QTTLSNPLTDLTLCTRYACSKEPKTSTIGILLRRIQGHSEARFCNFRNES
TIYIDRRYVTDDVVNTILSVNMYVVGTQQRGPQAPFTYGSGRQYKHTWRI
EEVGIMSTFWAVKRQKTGEQTYHLALRESSLVKGRVAMLITTRKDLAGNK
WVSKSATMNNKPTSSVELPVNFPERNTLVGPALEVFGDRVFDAFEAQLNI
LTEGQSSKDRFWFLARGLKFTSTTSLSSLEVLAKRKPTVFSHSYDNHYLA
SLVDIRIGETLMVVEPMMAISMRRSEGMNVAELKEECKKRKISGYSTKNK
DALRSVLAEWKESLETPLTLRDEITKLALGSWCFKPRKATESMKAGLRNE
NMIQENLPHSLKQKASLCTISARLYGALQRAPEPYRHITTSPDMVSVLMK
TNIAMSRNISSSMNAGHQPCSAQTYVFELKMFSGRESVEMAHAVRERYGQ
FSSIDLERSSTEGSVLSEDDMKAVSNQFKEHIPWKNYRYQVVHHAAICNC
NVIFVAATRSEIIYAVDVSVPHSVIEALAKTLRQLQSEYIPWSSLPLNDI
PKLNKAVMGFATNRQSVETYLKLVSAFHNTVQRHVAQLLFLEAENPSRTI
SMYINSPGGVVTAGLAIYDTMQYVAPDISTLCVGQACSMASLLLAAGTPG
ERRALPNARVMIHQPSGGAQGQASDIAIHATEILNLRKRLNGIYVKHTGR
SLKEIETRMERDHFMSAEEADQFGLIDEVVHPRSKEENSASAQSA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001907ClpP
IPR023562ClpP/TepA
IPR018215ClpP_Ser_AS
IPR033135ClpP_His_AS
IPR029045ClpP/crotonase-like_dom_sf