Ggra883.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra883.t1
Unique NameGgra883.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length201
Homology
BLAST of Ggra883.t1 vs. uniprot
Match: A0A2V3IZY7 (ATP-dependent Clp protease proteolytic subunit n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IZY7_9FLOR)

HSP 1 Score: 364 bits (935), Expect = 3.320e-126
Identity = 185/200 (92.50%), Postives = 192/200 (96.00%), Query Frame = 0
Query:    1 MVLEQTPRGERVFDIYSRLLKEHIICLNGPINDSMASLIVAQLLFLEAENPSRTISMYINSPGGVVTAGLAIYDTMQYVAPDISTLCVGQACSMASLLLAAGTPGERRALPNARVMIHQPSGGAQGQASDIAIHATEILNLRKRLNGIYVKHTGRSLKEIETRMERDHFMSAEEADQFGLIDEVVHPRSKEENSASAQSA 200
            MVLEQTPRGERVFDIYSRLLKEHIICLNGPINDSMASL+VAQLLFLEAENPSR ISMYINSPGGVVTAGLAIYDTMQYVAPDI+TLCVGQACSMASLLLAAG  G+RRALPNARVMIHQPSGGAQGQASDIAIHATEILNLRKRLN IYVKHTGR LKE+E+RMERDHFMSAEEA QFGLIDEVVHPRSK+ +S SAQSA
Sbjct:   48 MVLEQTPRGERVFDIYSRLLKEHIICLNGPINDSMASLVVAQLLFLEAENPSRPISMYINSPGGVVTAGLAIYDTMQYVAPDIATLCVGQACSMASLLLAAGASGQRRALPNARVMIHQPSGGAQGQASDIAIHATEILNLRKRLNDIYVKHTGRDLKEVESRMERDHFMSAEEATQFGLIDEVVHPRSKDMHSVSAQSA 247          
BLAST of Ggra883.t1 vs. uniprot
Match: R7QB91 (ATP-dependent Clp protease proteolytic subunit n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QB91_CHOCR)

HSP 1 Score: 331 bits (849), Expect = 8.290e-113
Identity = 162/199 (81.41%), Postives = 185/199 (92.96%), Query Frame = 0
Query:    1 MVLEQTPRGERVFDIYSRLLKEHIICLNGPINDSMASLIVAQLLFLEAENPSRTISMYINSPGGVVTAGLAIYDTMQYVAPDISTLCVGQACSMASLLLAAGTPGERRALPNARVMIHQPSGGAQGQASDIAIHATEILNLRKRLNGIYVKHTGRSLKEIETRMERDHFMSAEEADQFGLIDEVVHPRSKEENSASAQS 199
            MVLEQTPRGERVFDIYSRLLKEHIIC+NGPIND +ASL+VAQLLFLE+ENPSR I+MYINSPGGVV++GLAIYDTM+Y++  +STLCVGQACSMASLLLAAG PGERRALPN+RVMIHQPSGGAQGQASDIAIHATEIL+LRKRLN IY +HTG+SL+E+E+RMERDHFMSAE+A  FGLID VVHPR + E + +A+S
Sbjct:   69 MVLEQTPRGERVFDIYSRLLKEHIICVNGPINDGVASLVVAQLLFLESENPSRQINMYINSPGGVVSSGLAIYDTMEYISAKVSTLCVGQACSMASLLLAAGAPGERRALPNSRVMIHQPSGGAQGQASDIAIHATEILSLRKRLNAIYAQHTGQSLREVESRMERDHFMSAEDARNFGLIDLVVHPRDRTEQALTAES 267          
BLAST of Ggra883.t1 vs. uniprot
Match: A0A2H6AYD9 (ATP-dependent Clp protease proteolytic subunit n=1 Tax=bacterium HR40 TaxID=2035435 RepID=A0A2H6AYD9_9BACT)

HSP 1 Score: 287 bits (734), Expect = 3.480e-96
Identity = 140/195 (71.79%), Postives = 167/195 (85.64%), Query Frame = 0
Query:    1 MVLEQTPRGERVFDIYSRLLKEHIICLNGPINDSMASLIVAQLLFLEAENPSRTISMYINSPGGVVTAGLAIYDTMQYVAPDISTLCVGQACSMASLLLAAGTPGERRALPNARVMIHQPSGGAQGQASDIAIHATEILNLRKRLNGIYVKHTGRSLKEIETRMERDHFMSAEEADQFGLIDEVVHPRSKEENSA 195
            MV+EQTPRGER +DIYSR+LKE II L GPI+D +ASL+ AQLLFLEAENP + IS+YINSPGG+VT+GLAIYDTMQY+ P+++T+C+GQA SMASLLLAAG PG R ALP+AR+M HQPSGG QGQA+DI IHA EILNL++RLN IYVKHTGRSL EIE +MERD FMSA+EA +FG+IDEV+  R K+   A
Sbjct:   13 MVVEQTPRGERAYDIYSRMLKERIIFLMGPIDDHVASLVTAQLLFLEAENPDKEISLYINSPGGIVTSGLAIYDTMQYIRPNVATICIGQAASMASLLLAAGAPGRRFALPHARIMTHQPSGGFQGQATDIEIHAREILNLKRRLNEIYVKHTGRSLAEIEAKMERDTFMSAQEAKEFGIIDEVIEKRPKKPQEA 207          
BLAST of Ggra883.t1 vs. uniprot
Match: M2XM23 (ATP-dependent Clp protease proteolytic subunit n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2XM23_GALSU)

HSP 1 Score: 288 bits (738), Expect = 3.570e-96
Identity = 141/191 (73.82%), Postives = 165/191 (86.39%), Query Frame = 0
Query:    1 MVLEQTPRGERVFDIYSRLLKEHIICLNGPINDSMASLIVAQLLFLEAENPSRTISMYINSPGGVVTAGLAIYDTMQYVAPDISTLCVGQACSMASLLLAAGTPGERRALPNARVMIHQPSGGAQGQASDIAIHATEILNLRKRLNGIYVKHTGRSLKEIETRMERDHFMSAEEADQFGLIDEVVHPRSKE 191
            MVLEQTPRGERVFDIYSRLLKE IICLNG I D +ASL VAQLLFLEAENP + + MYINSPGG VTAGLA+YDTMQY++P +ST+C+GQACSMASLLLAAG  GERR+LPN+R+MIHQPSGGA G ASDI+IHA EIL LRKRLN +Y  HTG+ +  IET+MERDHFMSA++A +FG++DEV+  R +E
Sbjct:   49 MVLEQTPRGERVFDIYSRLLKERIICLNGTITDDVASLTVAQLLFLEAENPEKKVYMYINSPGGSVTAGLAVYDTMQYISPPVSTICLGQACSMASLLLAAGEKGERRSLPNSRIMIHQPSGGATGPASDISIHANEILYLRKRLNELYAYHTGQDIATIETKMERDHFMSADDALKFGILDEVIVRRDQE 239          
BLAST of Ggra883.t1 vs. uniprot
Match: A0A2E1CXR7 (ATP-dependent Clp protease proteolytic subunit n=1 Tax=Kordiimonas sp. TaxID=1970157 RepID=A0A2E1CXR7_9PROT)

HSP 1 Score: 278 bits (711), Expect = 1.060e-92
Identity = 135/188 (71.81%), Postives = 164/188 (87.23%), Query Frame = 0
Query:    1 MVLEQTPRGERVFDIYSRLLKEHIICLNGPINDSMASLIVAQLLFLEAENPSRTISMYINSPGGVVTAGLAIYDTMQYVAPDISTLCVGQACSMASLLLAAGTPGERRALPNARVMIHQPSGGAQGQASDIAIHATEILNLRKRLNGIYVKHTGRSLKEIETRMERDHFMSAEEADQFGLIDEVVHPR 188
            MV+EQT RGER +DIYSRLLKE II L G +ND+++S++ AQLLFLEAENP + IS+YINSPGGVVT+GLA+YDTMQY+ PD++TLC+GQACSM SLLLAAGT G+R ALPN+R+M+HQPSGGAQGQA+DI I A EIL+LR+RLNGIYVKHTG+ L+++E  +ERD+FMSAEEA  FGLID VV  R
Sbjct:   15 MVVEQTSRGERSYDIYSRLLKERIIFLTGQVNDAVSSVVCAQLLFLEAENPKKDISIYINSPGGVVTSGLAMYDTMQYIRPDVATLCIGQACSMGSLLLAAGTEGKRFALPNSRIMVHQPSGGAQGQATDIEIQAKEILSLRERLNGIYVKHTGQKLEKVEQALERDNFMSAEEAKDFGLIDVVVEKR 202          
BLAST of Ggra883.t1 vs. uniprot
Match: ATP-dependent Clp endopeptidase proteolytic subunit ClpP n=1 Tax=Kordiimonas sediminis TaxID=1735581 RepID=UPI00174C9EEF (ATP-dependent Clp endopeptidase proteolytic subunit ClpP n=1 Tax=Kordiimonas sediminis TaxID=1735581 RepID=UPI00174C9EEF)

HSP 1 Score: 278 bits (711), Expect = 1.220e-92
Identity = 140/191 (73.30%), Postives = 159/191 (83.25%), Query Frame = 0
Query:    1 MVLEQTPRGERVFDIYSRLLKEHIICLNGPINDSMASLIVAQLLFLEAENPSRTISMYINSPGGVVTAGLAIYDTMQYVAPDISTLCVGQACSMASLLLAAGTPGERRALPNARVMIHQPSGGAQGQASDIAIHATEILNLRKRLNGIYVKHTGRSLKEIETRMERDHFMSAEEADQFGLIDEVVHPRSKE 191
            MV+EQT RGER FDIYSRLLKE II L GP+ND +ASLIVAQLLFLEAENP + IS YINSPGGVVT+GL++YDTMQY+ P ++T+C+GQACSM SLLL AG  G R ALPNARVMIHQPSGGAQGQA+DI I A EIL +R+RLN IYVKHTG+ LK IE  M+RD+FMSAEEA  FGLIDEV+  R  E
Sbjct:   15 MVVEQTARGERSFDIYSRLLKERIIFLTGPVNDQVASLIVAQLLFLEAENPEKDISFYINSPGGVVTSGLSMYDTMQYIRPKVATMCIGQACSMGSLLLTAGEAGMRYALPNARVMIHQPSGGAQGQAADIEIQAKEILKMRQRLNEIYVKHTGQKLKTIEGAMDRDNFMSAEEAKSFGLIDEVITSREDE 205          
BLAST of Ggra883.t1 vs. uniprot
Match: A9P1N5 (ATP-dependent Clp protease proteolytic subunit n=1 Tax=Picea sitchensis TaxID=3332 RepID=A9P1N5_PICSI)

HSP 1 Score: 279 bits (714), Expect = 1.490e-92
Identity = 137/188 (72.87%), Postives = 161/188 (85.64%), Query Frame = 0
Query:    1 MVLEQTPRGERVFDIYSRLLKEHIICLNGPINDSMASLIVAQLLFLEAENPSRTISMYINSPGGVVTAGLAIYDTMQYVAPDISTLCVGQACSMASLLLAAGTPGERRALPNARVMIHQPSGGAQGQASDIAIHATEILNLRKRLNGIYVKHTGRSLKEIETRMERDHFMSAEEADQFGLIDEVVHPR 188
            MV+E T RGER +DI+SRLLKE IIC+NGPI D  AS++VAQLLFLE+ENP + I+MYINSPGGVVTAGLAIYDTMQY+   ++TLC+GQA SM SLLLAAG+ GERRALPNARVMIHQPSGGA GQASDIAIHA EIL  R+RLNG+Y KHTG+++++IE  MERD FMS +EA +FGLIDEV+  R
Sbjct:   40 MVIEHTSRGERAYDIFSRLLKERIICINGPIADETASVVVAQLLFLESENPQKPINMYINSPGGVVTAGLAIYDTMQYIKSPVTTLCIGQAASMGSLLLAAGSHGERRALPNARVMIHQPSGGASGQASDIAIHAKEILKTRERLNGLYAKHTGQTIEKIEQFMERDTFMSPDEAKEFGLIDEVIEHR 227          
BLAST of Ggra883.t1 vs. uniprot
Match: A0A3M2DKW9 (ATP-dependent Clp protease proteolytic subunit n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A3M2DKW9_9PROT)

HSP 1 Score: 278 bits (710), Expect = 1.560e-92
Identity = 135/190 (71.05%), Postives = 164/190 (86.32%), Query Frame = 0
Query:    1 MVLEQTPRGERVFDIYSRLLKEHIICLNGPINDSMASLIVAQLLFLEAENPSRTISMYINSPGGVVTAGLAIYDTMQYVAPDISTLCVGQACSMASLLLAAGTPGERRALPNARVMIHQPSGGAQGQASDIAIHATEILNLRKRLNGIYVKHTGRSLKEIETRMERDHFMSAEEADQFGLIDEVVHPRSK 190
            MV+EQT RGER +DI+SRLLKE I+ ++GP++D MA+LIVAQLLFLE+ENPS+ ISMYINSPGGVVT+GL+IYDTMQY+ P +STL +GQA SM SLLLAAG PG R ALPN+R+M+HQPSGG QGQASDIA+HA EIL L+ RLN IYVKHTG+ LK++E  ++RD+FM+AEEA  FGLIDE+V PR K
Sbjct:   15 MVVEQTSRGERAYDIFSRLLKERIVFVSGPVHDGMATLIVAQLLFLESENPSKEISMYINSPGGVVTSGLSIYDTMQYIKPKVSTLVIGQAASMGSLLLAAGEPGMRYALPNSRIMVHQPSGGFQGQASDIALHAKEILELKDRLNRIYVKHTGQPLKKVEQALDRDNFMTAEEAKAFGLIDEIVAPRDK 204          
BLAST of Ggra883.t1 vs. uniprot
Match: A0A2H6AV16 (ATP-dependent Clp protease proteolytic subunit n=1 Tax=bacterium HR39 TaxID=2035434 RepID=A0A2H6AV16_9BACT)

HSP 1 Score: 277 bits (708), Expect = 2.940e-92
Identity = 133/188 (70.74%), Postives = 162/188 (86.17%), Query Frame = 0
Query:    1 MVLEQTPRGERVFDIYSRLLKEHIICLNGPINDSMASLIVAQLLFLEAENPSRTISMYINSPGGVVTAGLAIYDTMQYVAPDISTLCVGQACSMASLLLAAGTPGERRALPNARVMIHQPSGGAQGQASDIAIHATEILNLRKRLNGIYVKHTGRSLKEIETRMERDHFMSAEEADQFGLIDEVVHPR 188
            +V+EQTPRGER +DIYSR+LKE II L GPI+D +ASL+ AQLLFLEAENP + IS+YINSPGG+VTAGLAIYDTMQY+ PD+ T+C+GQA SM SLLLAAG PG+R ALP+AR+M HQPSGG QGQA+DI IHA EILNL+++LN IYV+HTGR+L+E+E +MERD FMS EEA +FG+ID V+  R
Sbjct:   10 IVVEQTPRGERAYDIYSRMLKERIIFLMGPIDDHVASLVTAQLLFLEAENPEKDISLYINSPGGLVTAGLAIYDTMQYIRPDVVTICIGQAASMGSLLLAAGAPGKRFALPHARIMTHQPSGGFQGQATDIEIHAREILNLKRKLNEIYVRHTGRTLEEVEAKMERDTFMSTEEAREFGIIDAVIEKR 197          
BLAST of Ggra883.t1 vs. uniprot
Match: A0A2K1KQP6 (ATP-dependent Clp protease proteolytic subunit n=2 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1KQP6_PHYPA)

HSP 1 Score: 277 bits (709), Expect = 9.160e-92
Identity = 135/188 (71.81%), Postives = 161/188 (85.64%), Query Frame = 0
Query:    1 MVLEQTPRGERVFDIYSRLLKEHIICLNGPINDSMASLIVAQLLFLEAENPSRTISMYINSPGGVVTAGLAIYDTMQYVAPDISTLCVGQACSMASLLLAAGTPGERRALPNARVMIHQPSGGAQGQASDIAIHATEILNLRKRLNGIYVKHTGRSLKEIETRMERDHFMSAEEADQFGLIDEVVHPR 188
            MV+E T RGER +DI+SRLLKE I+C++GPI+D  ASL+VAQLL+LE+E+P + I +YINSPGGVVTAGLAIYDTMQY+   +STLCVGQA SM SLLLAAG PGERR+LPNARVMIHQPSGGA GQASDIAI A EIL++R RL+ +YVKHTG + ++IE+ MERDHFMS EEA QFGL+DEV+  R
Sbjct:   50 MVIEHTSRGERAYDIFSRLLKERIVCIHGPISDDTASLVVAQLLYLESEHPDKPIHLYINSPGGVVTAGLAIYDTMQYIRSPVSTLCVGQAASMGSLLLAAGQPGERRSLPNARVMIHQPSGGASGQASDIAIQAREILDMRARLSRLYVKHTGHTYEKIESSMERDHFMSPEEAKQFGLVDEVIERR 237          
The following BLAST results are available for this feature:
BLAST of Ggra883.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IZY73.320e-12692.50ATP-dependent Clp protease proteolytic subunit n=1... [more]
R7QB918.290e-11381.41ATP-dependent Clp protease proteolytic subunit n=1... [more]
A0A2H6AYD93.480e-9671.79ATP-dependent Clp protease proteolytic subunit n=1... [more]
M2XM233.570e-9673.82ATP-dependent Clp protease proteolytic subunit n=1... [more]
A0A2E1CXR71.060e-9271.81ATP-dependent Clp protease proteolytic subunit n=1... [more]
ATP-dependent Clp endopeptidase proteolytic subunit ClpP n=1 Tax=Kordiimonas sediminis TaxID=1735581 RepID=UPI00174C9EEF1.220e-9273.30ATP-dependent Clp endopeptidase proteolytic subuni... [more]
A9P1N51.490e-9272.87ATP-dependent Clp protease proteolytic subunit n=1... [more]
A0A3M2DKW91.560e-9271.05ATP-dependent Clp protease proteolytic subunit n=1... [more]
A0A2H6AV162.940e-9270.74ATP-dependent Clp protease proteolytic subunit n=1... [more]
A0A2K1KQP69.160e-9271.81ATP-dependent Clp protease proteolytic subunit n=2... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001907ATP-dependent Clp protease proteolytic subunitPRINTSPR00127CLPPROTEASEPcoord: 163..182
score: 54.88
coord: 85..102
score: 58.89
coord: 14..29
score: 50.62
coord: 54..74
score: 64.17
coord: 106..125
score: 59.62
IPR001907ATP-dependent Clp protease proteolytic subunitHAMAPMF_00444ClpPcoord: 1..188
score: 38.924805
IPR001907ATP-dependent Clp protease proteolytic subunitCDDcd07017S14_ClpP_2coord: 14..184
e-value: 5.93645E-108
score: 304.75
IPR023562Clp protease proteolytic subunit /Translocation-enhancing protein TepAPFAMPF00574CLP_proteasecoord: 8..186
e-value: 3.1E-82
score: 274.9
IPR023562Clp protease proteolytic subunit /Translocation-enhancing protein TepAPANTHERPTHR10381ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNITcoord: 1..191
NoneNo IPR availableGENE3D3.90.226.10coord: 1..193
e-value: 3.5E-83
score: 280.2
NoneNo IPR availablePANTHERPTHR10381:SF11ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT, MITOCHONDRIALcoord: 1..191
IPR018215ClpP, Ser active sitePROSITEPS00381CLP_PROTEASE_SERcoord: 85..96
IPR033135ClpP, histidine active sitePROSITEPS00382CLP_PROTEASE_HIScoord: 107..120
IPR029045ClpP/crotonase-like domain superfamilySUPERFAMILY52096ClpP/crotonasecoord: 5..188

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000212_piloncontigtig00000212_pilon:51645..52247 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra883.t1Ggra883.t1Gracilaria gracilis GNS1m malemRNAtig00000212_pilon 51645..52247 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra883.t1 ID=Ggra883.t1|Name=Ggra883.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=201bp
MVLEQTPRGERVFDIYSRLLKEHIICLNGPINDSMASLIVAQLLFLEAEN
PSRTISMYINSPGGVVTAGLAIYDTMQYVAPDISTLCVGQACSMASLLLA
AGTPGERRALPNARVMIHQPSGGAQGQASDIAIHATEILNLRKRLNGIYV
KHTGRSLKEIETRMERDHFMSAEEADQFGLIDEVVHPRSKEENSASAQSA
*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001907ClpP
IPR023562ClpP/TepA
IPR018215ClpP_Ser_AS
IPR033135ClpP_His_AS
IPR029045ClpP/crotonase-like_dom_sf