Ggra8827.t1 (polypeptide) Gracilaria gracilis GNS1m male
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Overview
Homology
BLAST of Ggra8827.t1 vs. uniprot
Match: A0A2V3ICY5 (DNA topoisomerase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ICY5_9FLOR) HSP 1 Score: 159 bits (401), Expect = 3.140e-41 Identity = 77/109 (70.64%), Postives = 89/109 (81.65%), Query Frame = 0
Query: 110 TPFQHDRMQAMCDRLDLQNGKVISVLNRNMLRHPPTPIITSTLQQEYGNQFGFGARRTMRTPQKLYENGLITYMRTDNAQLSDQAMDSCRKAVQRLYGEDMLRDQYTKT 218
T F HDRM A+C+RLD N V SV +R RHPPTP+ITSTLQQE GN+FGFGA RTMR QKLYENGLITYMRTDN +LSDQA+ SCR+AVQ++YG+D+LRDQ T T
Sbjct: 303 TRFDHDRMTALCERLDCHNATVKSVEHRETSRHPPTPLITSTLQQECGNRFGFGAGRTMRIAQKLYENGLITYMRTDNPKLSDQAVASCREAVQQIYGKDVLRDQNTVT 411
BLAST of Ggra8827.t1 vs. uniprot
Match: A0A2H3NWV0 (DNA topoisomerase 1 n=1 Tax=Longimonas halophila TaxID=1469170 RepID=A0A2H3NWV0_9BACT) HSP 1 Score: 101 bits (251), Expect = 9.590e-21 Identity = 52/116 (44.83%), Postives = 68/116 (58.62%), Query Frame = 0
Query: 98 RVNPDLVETAPLTPFQHDRMQAMCDRLDLQNGKVISVLNRNMLRHPPTPIITSTLQQEYGNQFGFGARRTMRTPQKLYENGLITYMRTDNAQLSDQAMDSCRKAVQRLYGEDMLRD 213
R+ DL E + D+ A+ D L + +V V R ++PP P ITSTLQQE + GF A RTMR QKLYENG ITYMRTD+ LS +A+ + R +++ YG D L D
Sbjct: 241 RLKDDLEEGKDVLLLSEDQATALADTLPTEPWRVADVKTRTRTKNPPPPFITSTLQQEASRKLGFTANRTMRVAQKLYENGHITYMRTDSKNLSKEAIAASRSSIETRYGSDYLSD 356
BLAST of Ggra8827.t1 vs. uniprot
Match: A0A2E1Q7P8 (DNA topoisomerase 1 n=2 Tax=Bdellovibrionales TaxID=213481 RepID=A0A2E1Q7P8_9PROT) HSP 1 Score: 96.7 bits (239), Expect = 3.740e-19 Identity = 52/109 (47.71%), Postives = 68/109 (62.39%), Query Frame = 0
Query: 115 DRMQAMCDRLDLQNGKVISVLNRNMLRHPPTPIITSTLQQEYGNQFGFGARRTMRTPQKLYENGLITYMRTDNAQLSDQAMDSCRKAVQRLYGEDMLRDQ---YTKTPI 220
D A +L+ Q+ KV V + + R P P ITSTLQQE + G +R TM+ QKLYENG ITYMRTD+ LS QA+D R A+++L+G+D L DQ YTK +
Sbjct: 258 DLASAWKGKLEGQSWKVKEVEEKPVSRKPAPPFITSTLQQEANRKLGMSSRETMQVAQKLYENGHITYMRTDSTNLSQQAIDGARAAIKQLFGKDYLPDQPRLYTKKKV 366
BLAST of Ggra8827.t1 vs. uniprot
Match: type I DNA topoisomerase n=1 Tax=Nakamurella flavida TaxID=363630 RepID=UPI001965F950 (type I DNA topoisomerase n=1 Tax=Nakamurella flavida TaxID=363630 RepID=UPI001965F950) HSP 1 Score: 96.3 bits (238), Expect = 5.170e-19 Identity = 50/106 (47.17%), Postives = 67/106 (63.21%), Query Frame = 0
Query: 115 DRMQAMCDRLDLQNGKVISVLNRNMLRHPPTPIITSTLQQEYGNQFGFGARRTMRTPQKLYENGLITYMRTDNAQLSDQAMDSCRKAVQRLYGEDMLRD---QYTK 217
D +A+ D LD + V SV ++ R P P +TSTLQQE G + GF + RTMRT Q+LYE+G ITYMRTD+ LS A+D+ R + LYG + + D QYT+
Sbjct: 272 DAARALADGLDGREASVTSVEDKPYTRKPYPPFMTSTLQQEAGRKLGFNSERTMRTAQRLYESGYITYMRTDSTTLSQTALDAARTQARELYGPEYVPDAPRQYTR 377
BLAST of Ggra8827.t1 vs. uniprot
Match: A0A7Y2E9X2 (DNA topoisomerase 1 n=1 Tax=Candidatus Eisenbacteria bacterium TaxID=2212470 RepID=A0A7Y2E9X2_9BACT) HSP 1 Score: 95.1 bits (235), Expect = 1.270e-18 Identity = 58/156 (37.18%), Postives = 83/156 (53.21%), Query Frame = 0
Query: 65 QVRFVRGMHRSGVGTI---------LRQILQEDIRIFCGFMVRVNPDLVETAPLTPFQHDRMQAMCDRLDLQNGKVISVLNRNMLRHPPTPIITSTLQQEYGNQFGFGARRTMRTPQKLYENGLITYMRTDNAQLSDQAMDSCRKAVQRLYGEDML 211
++RFV + GT + I+ D RI G ++ ++T + + ++ Q++ +RL KVIS + ++P P TSTLQQE + F A+RTMR Q LYENG ITYMRTD+ LSDQA+ + R+AV LY E L
Sbjct: 195 RMRFVESTYWDIEGTFGTKEGKEFDAKLIMLNDKRIALGRDFDLDTGKLKTDGVVHVEAEQAQSLAERLKSGPWKVISTEEKGFTQNPSPPFTTSTLQQEGSRKLRFSAQRTMRAAQHLYENGYITYMRTDSPTLSDQAVKAAREAVVSLYDESYL 350
BLAST of Ggra8827.t1 vs. uniprot
Match: A0A0Q5ECL6 (DNA topoisomerase 1 n=22 Tax=Microbacteriaceae TaxID=85023 RepID=A0A0Q5ECL6_9MICO) HSP 1 Score: 95.1 bits (235), Expect = 1.280e-18 Identity = 57/149 (38.26%), Postives = 76/149 (51.01%), Query Frame = 0
Query: 67 RFVRGMHRSGVGTILRQILQEDIRIFCGFMVRVNPDLVET-APLTPFQHDRMQAMCDRLDLQNGKVISVLNRNMLRHPPTPIITSTLQQEYGNQFGFGARRTMRTPQKLYENGLITYMRTDNAQLSDQAMDSCRKAVQRLYGEDMLRDQ 214
RF+ G +G R + + R+ G R DL + P R A+ L+ V+SV ++ R P P TSTLQQE G + F AR+TM Q LYENG ITYMRTD+ LS QA+D+ RK LYG + + D+
Sbjct: 195 RFLPGEDATGAPFTARLVRLDGDRVATG---RDFDDLGQLKGSAVPLDEQRATALAAALEQSKATVLSVESKPYSRRPAAPFTTSTLQQEAGRKLRFSARQTMSVAQSLYENGYITYMRTDSPSLSKQAIDAARKQAASLYGAETVPDK 340
BLAST of Ggra8827.t1 vs. uniprot
Match: A0A5Q4F9C0 (DNA topoisomerase 1 n=1 Tax=Balneolaceae bacterium TaxID=2053516 RepID=A0A5Q4F9C0_9BACT) HSP 1 Score: 94.7 bits (234), Expect = 1.700e-18 Identity = 48/103 (46.60%), Postives = 63/103 (61.17%), Query Frame = 0
Query: 109 LTPFQHDRMQAMCDRLDLQNGKVISVLNRNMLRHPPTPIITSTLQQEYGNQFGFGARRTMRTPQKLYENGLITYMRTDNAQLSDQAMDSCRKAVQRLYGEDML 211
L ++ +++ L V SV ++ R P P ITSTLQQE +FG+ AR TMR QKLYE G ITYMRTD+ LS QA+ + R AV+R+YG+D L
Sbjct: 254 LVLLDREQAESLQGELAAAQWSVASVASKTQKRTPAPPFITSTLQQEANRKFGYSARDTMRIAQKLYEEGYITYMRTDSTNLSGQAISAARSAVERMYGDDYL 356
BLAST of Ggra8827.t1 vs. uniprot
Match: A0A2N1WB96 (DNA topoisomerase I (Fragment) n=1 Tax=Gemmatimonadetes bacterium HGW-Gemmatimonadetes-1 TaxID=2013806 RepID=A0A2N1WB96_9BACT) HSP 1 Score: 92.8 bits (229), Expect = 7.110e-18 Identity = 48/94 (51.06%), Postives = 61/94 (64.89%), Query Frame = 0
Query: 120 MCDRLDLQNGKVISVLNRNMLRHPPTPIITSTLQQEYGNQFGFGARRTMRTPQKLYENGLITYMRTDNAQLSDQAMDSCRKAVQRLYGEDMLRD 213
+ +RL N +V+SV P P TSTLQQE + FGARRTM+ Q+LYENG ITYMRTD+ LSDQA+++ R V+ LYGE+ L D
Sbjct: 2 LVERLQGGNWRVVSVEETPRTLRPYAPFTTSTLQQEANRKLRFGARRTMQVAQRLYENGYITYMRTDSTALSDQAVNAARAQVRTLYGENYLPD 95
BLAST of Ggra8827.t1 vs. uniprot
Match: A0A518F0G3 (DNA topoisomerase 1 n=1 Tax=Planctomycetes bacterium Poly30 TaxID=2528018 RepID=A0A518F0G3_9BACT) HSP 1 Score: 92.8 bits (229), Expect = 7.930e-18 Identity = 50/97 (51.55%), Postives = 60/97 (61.86%), Query Frame = 0
Query: 118 QAMCDRLDLQNGKVISVLNRNMLRHPPTPIITSTLQQEYGNQFGFGARRTMRTPQKLYENGLITYMRTDNAQLSDQAMDSCRKAVQRLYGEDMLRDQ 214
+A+ RL+ VIS R R P P TSTLQQE + F A+RTMR Q+LYENG ITYMRTD+ LS QA+D R AV+ +YG D L DQ
Sbjct: 261 KALRARLEDGTFNVISAEERPFTRSPAPPFTTSTLQQEGNRKLRFDAKRTMRAAQRLYENGYITYMRTDSVTLSTQAIDLARAAVEDMYGSDFLPDQ 357
BLAST of Ggra8827.t1 vs. uniprot
Match: A0A511N0Q9 (DNA topoisomerase 1 n=3 Tax=Deinococcus TaxID=1298 RepID=A0A511N0Q9_9DEIO) HSP 1 Score: 92.8 bits (229), Expect = 7.980e-18 Identity = 45/94 (47.87%), Postives = 63/94 (67.02%), Query Frame = 0
Query: 118 QAMCDRLDLQNGKVISVLNRNMLRHPPTPIITSTLQQEYGNQFGFGARRTMRTPQKLYENGLITYMRTDNAQLSDQAMDSCRKAVQRLYGEDML 211
+++ +RL V+S R + P P ITS+LQQE + GF A+RTMRT Q+LYE G ITYMRTD+ LS +AM++ RK V+++YG+D L
Sbjct: 258 ESLLERLKTTAFSVVSTEERPFTQKPYAPFITSSLQQEGSRKLGFSAQRTMRTAQRLYEQGYITYMRTDSTTLSKEAMEAARKQVRQMYGDDYL 351 The following BLAST results are available for this feature:
BLAST of Ggra8827.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Ggra8827.t1 ID=Ggra8827.t1|Name=Ggra8827.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=249bpback to top |