Ggra8826.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra8826.t1
Unique NameGgra8826.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length182
Homology
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BLAST of Ggra8826.t1 vs. uniprot
Match: A0A2V3INR0 (Monothiol glutaredoxin-S12, chloroplastic n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3INR0_9FLOR)

HSP 1 Score: 145 bits (366), Expect = 9.890e-40
Identity = 69/124 (55.65%), Postives = 89/124 (71.77%), Query Frame = 0 
Query:   49 LSAQDFGNMEDLPAERVPTLVPQLFSHWGRPDVHGIYDSQNRLQYVTAVANVRDAIFNHVLFVQDAERYQFVRMLILDDLQHKYALGDLAGQWVMTHTKHGPAISPGISDEAPEWRLVRKPENI 172
            + AQ +G++EDLP E +P  V +L ++W RP V+G+Y S+N LQYV AVA+VR AI NHVLFV+D +    VRML +D+L    ALGDLA +WV+TH  +GP I PG SD APEWR  RK EN+
Sbjct:   47 IRAQQYGSVEDLPTEPIPRSVEELPAYWSRPGVYGVYSSKNVLQYVAAVADVRSAIANHVLFVKDEDLRHSVRMLTVDNLDQAEALGDLAEKWVITHADYGPGIPPGNSDTAPEWRKERKEENL 170
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BLAST of Ggra8826.t1 vs. uniprot
Match: R7QS23 (Glutaredoxin domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QS23_CHOCR)

HSP 1 Score: 119 bits (299), Expect = 1.270e-29
Identity = 79/199 (39.70%), Postives = 107/199 (53.77%), Query Frame = 0 
Query:    1 MAPKLAAFTLSIPVPPSLR-----TTVVARTSPKHSLTVCARHCRHPTPAPPRLSAQDF-------GNMEDLPAERVP---TLVPQLFSHWGRPDVHGIYDSQNRLQYVTAVANVRDAIFNHVLFVQDAERYQFVRMLILDDLQHKYALGDLAGQWVMTHTKHGPAISPGISDEAPEWR---LVRKPENIYFKDNAQQE 181
            MA +L AF+ SI +  S R     ++  A   P    +  + H + PTP  P+L            GN+EDLPAER+P    LVPQ   HW RP V+G+Y     LQYV AV +V  AI  H+  + D +    VRM+++D ++    LGD+A  WV+TH +HGP + PG  D AP WR   LVR  + IYF  N + E
Sbjct:    1 MAQRLPAFSASIALVASKRGSATLSSFTASRVPLVRHSTVSFHRQRPTPRFPQLPPDSIRSPTAQLGNVEDLPAERIPGDAALVPQ---HWHRPGVYGVYSINAELQYVAAVRDVGAAIATHITIINDPKLVFAVRMILVDTVEQA-PLGDIAETWVLTHFEHGPGVPPGNGDAAPIWREEELVRTAD-IYFPPNTEPE 194
The following BLAST results are available for this feature:
BLAST of Ggra8826.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3INR09.890e-4055.65Monothiol glutaredoxin-S12, chloroplastic n=1 Tax=... [more]
R7QS231.270e-2939.70Glutaredoxin domain-containing protein n=1 Tax=Cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 25..181
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 13..24
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..24
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..4
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 5..12

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000860_piloncontigtig00000860_pilon:329278..329823 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra8826.t1Ggra8826.t1Gracilaria gracilis GNS1m malemRNAtig00000860_pilon 329278..329823 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra8826.t1 ID=Ggra8826.t1|Name=Ggra8826.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=182bp
MAPKLAAFTLSIPVPPSLRTTVVARTSPKHSLTVCARHCRHPTPAPPRLS
AQDFGNMEDLPAERVPTLVPQLFSHWGRPDVHGIYDSQNRLQYVTAVANV
RDAIFNHVLFVQDAERYQFVRMLILDDLQHKYALGDLAGQWVMTHTKHGP
AISPGISDEAPEWRLVRKPENIYFKDNAQQE*
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